Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13355

Experiment: Heptanoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS13350 and ABZR87_RS13355 are separated by 391 nucleotidesABZR87_RS13355 and ABZR87_RS13360 are separated by 25 nucleotides ABZR87_RS13350: ABZR87_RS13350 - potassium transporter Kup, at 2,831,100 to 2,833,001 _RS13350 ABZR87_RS13355: ABZR87_RS13355 - hypothetical protein, at 2,833,393 to 2,833,632 _RS13355 ABZR87_RS13360: ABZR87_RS13360 - quinone-dependent dihydroorotate dehydrogenase, at 2,833,658 to 2,834,692 _RS13360 Position (kb) 2833 2834Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2832.631 kb on + strand, within ABZR87_RS13350at 2832.775 kb on + strand, within ABZR87_RS13350at 2832.775 kb on + strand, within ABZR87_RS13350at 2832.775 kb on + strand, within ABZR87_RS13350at 2832.776 kb on - strand, within ABZR87_RS13350at 2832.776 kb on - strand, within ABZR87_RS13350at 2832.776 kb on - strand, within ABZR87_RS13350at 2832.776 kb on - strand, within ABZR87_RS13350at 2832.787 kb on - strand, within ABZR87_RS13350at 2832.889 kb on + strandat 2832.890 kb on - strandat 2832.890 kb on - strandat 2832.988 kb on - strandat 2832.988 kb on - strandat 2833.271 kb on + strandat 2833.306 kb on + strandat 2833.356 kb on - strandat 2833.475 kb on + strand, within ABZR87_RS13355at 2833.476 kb on - strand, within ABZR87_RS13355at 2833.558 kb on + strand, within ABZR87_RS13355at 2833.558 kb on + strand, within ABZR87_RS13355at 2833.558 kb on + strand, within ABZR87_RS13355at 2833.570 kb on + strand, within ABZR87_RS13355at 2833.570 kb on + strand, within ABZR87_RS13355

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Per-strain Table

Position Strand Gene LocusTag Fraction Heptanoic (C)
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2,832,631 + ABZR87_RS13350 0.80 -0.9
2,832,775 + ABZR87_RS13350 0.88 -2.3
2,832,775 + ABZR87_RS13350 0.88 -0.1
2,832,775 + ABZR87_RS13350 0.88 +0.1
2,832,776 - ABZR87_RS13350 0.88 -1.3
2,832,776 - ABZR87_RS13350 0.88 -0.9
2,832,776 - ABZR87_RS13350 0.88 -0.3
2,832,776 - ABZR87_RS13350 0.88 -2.1
2,832,787 - ABZR87_RS13350 0.89 +0.7
2,832,889 + +0.7
2,832,890 - +3.5
2,832,890 - +1.7
2,832,988 - +0.1
2,832,988 - -1.3
2,833,271 + +1.3
2,833,306 + -0.1
2,833,356 - +1.2
2,833,475 + ABZR87_RS13355 0.34 -2.1
2,833,476 - ABZR87_RS13355 0.35 +0.1
2,833,558 + ABZR87_RS13355 0.69 -2.4
2,833,558 + ABZR87_RS13355 0.69 -0.6
2,833,558 + ABZR87_RS13355 0.69 +0.1
2,833,570 + ABZR87_RS13355 0.74 -2.5
2,833,570 + ABZR87_RS13355 0.74 -1.3

Or see this region's nucleotide sequence