Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13350 and ABZR87_RS13355 are separated by 391 nucleotides ABZR87_RS13355 and ABZR87_RS13360 are separated by 25 nucleotides
ABZR87_RS13350: ABZR87_RS13350 - potassium transporter Kup, at 2,831,100 to 2,833,001
_RS13350
ABZR87_RS13355: ABZR87_RS13355 - hypothetical protein, at 2,833,393 to 2,833,632
_RS13355
ABZR87_RS13360: ABZR87_RS13360 - quinone-dependent dihydroorotate dehydrogenase, at 2,833,658 to 2,834,692
_RS13360
Position (kb)
2833
2834 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2832.631 kb on + strand, within ABZR87_RS13350 at 2832.775 kb on + strand, within ABZR87_RS13350 at 2832.775 kb on + strand, within ABZR87_RS13350 at 2832.775 kb on + strand, within ABZR87_RS13350 at 2832.776 kb on - strand, within ABZR87_RS13350 at 2832.776 kb on - strand, within ABZR87_RS13350 at 2832.776 kb on - strand, within ABZR87_RS13350 at 2832.776 kb on - strand, within ABZR87_RS13350 at 2832.787 kb on - strand, within ABZR87_RS13350 at 2832.889 kb on + strand at 2832.890 kb on - strand at 2832.890 kb on - strand at 2832.988 kb on - strand at 2832.988 kb on - strand at 2833.271 kb on + strand at 2833.306 kb on + strand at 2833.356 kb on - strand at 2833.475 kb on + strand, within ABZR87_RS13355 at 2833.476 kb on - strand, within ABZR87_RS13355 at 2833.558 kb on + strand, within ABZR87_RS13355 at 2833.558 kb on + strand, within ABZR87_RS13355 at 2833.558 kb on + strand, within ABZR87_RS13355 at 2833.570 kb on + strand, within ABZR87_RS13355 at 2833.570 kb on + strand, within ABZR87_RS13355
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 2,832,631 + ABZR87_RS13350 0.80 -0.9 2,832,775 + ABZR87_RS13350 0.88 -2.3 2,832,775 + ABZR87_RS13350 0.88 -0.1 2,832,775 + ABZR87_RS13350 0.88 +0.1 2,832,776 - ABZR87_RS13350 0.88 -1.3 2,832,776 - ABZR87_RS13350 0.88 -0.9 2,832,776 - ABZR87_RS13350 0.88 -0.3 2,832,776 - ABZR87_RS13350 0.88 -2.1 2,832,787 - ABZR87_RS13350 0.89 +0.7 2,832,889 + +0.7 2,832,890 - +3.5 2,832,890 - +1.7 2,832,988 - +0.1 2,832,988 - -1.3 2,833,271 + +1.3 2,833,306 + -0.1 2,833,356 - +1.2 2,833,475 + ABZR87_RS13355 0.34 -2.1 2,833,476 - ABZR87_RS13355 0.35 +0.1 2,833,558 + ABZR87_RS13355 0.69 -2.4 2,833,558 + ABZR87_RS13355 0.69 -0.6 2,833,558 + ABZR87_RS13355 0.69 +0.1 2,833,570 + ABZR87_RS13355 0.74 -2.5 2,833,570 + ABZR87_RS13355 0.74 -1.3
Or see this region's nucleotide sequence