Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13325 and ABZR87_RS13330 are separated by 84 nucleotides ABZR87_RS13330 and ABZR87_RS13335 are separated by 35 nucleotides ABZR87_RS13335 and ABZR87_RS13340 are separated by 110 nucleotides
ABZR87_RS13325: ABZR87_RS13325 - ATP-dependent DNA helicase, at 2,824,721 to 2,826,862
_RS13325
ABZR87_RS13330: ABZR87_RS13330 - DUF465 domain-containing protein, at 2,826,947 to 2,827,150
_RS13330
ABZR87_RS13335: ABZR87_RS13335 - hypothetical protein, at 2,827,186 to 2,827,950
_RS13335
ABZR87_RS13340: ABZR87_RS13340 - Tex family protein, at 2,828,061 to 2,830,394
_RS13340
Position (kb)
2827
2828 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2826.228 kb on + strand, within ABZR87_RS13325 at 2826.228 kb on + strand, within ABZR87_RS13325 at 2826.232 kb on - strand, within ABZR87_RS13325 at 2826.232 kb on - strand, within ABZR87_RS13325 at 2826.257 kb on - strand, within ABZR87_RS13325 at 2826.257 kb on - strand, within ABZR87_RS13325 at 2826.257 kb on - strand, within ABZR87_RS13325 at 2826.271 kb on + strand, within ABZR87_RS13325 at 2826.272 kb on - strand, within ABZR87_RS13325 at 2826.426 kb on + strand, within ABZR87_RS13325 at 2826.427 kb on - strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.438 kb on + strand, within ABZR87_RS13325 at 2826.439 kb on - strand, within ABZR87_RS13325 at 2826.439 kb on - strand, within ABZR87_RS13325 at 2826.591 kb on + strand, within ABZR87_RS13325 at 2826.591 kb on + strand, within ABZR87_RS13325 at 2826.591 kb on + strand, within ABZR87_RS13325 at 2826.592 kb on - strand, within ABZR87_RS13325 at 2826.592 kb on - strand, within ABZR87_RS13325 at 2826.592 kb on - strand, within ABZR87_RS13325 at 2826.597 kb on + strand, within ABZR87_RS13325 at 2826.598 kb on - strand, within ABZR87_RS13325 at 2826.598 kb on - strand, within ABZR87_RS13325 at 2826.617 kb on - strand, within ABZR87_RS13325 at 2826.712 kb on + strand at 2826.713 kb on - strand at 2826.713 kb on - strand at 2826.713 kb on - strand at 2826.713 kb on - strand at 2826.949 kb on - strand at 2826.980 kb on + strand, within ABZR87_RS13330 at 2826.980 kb on + strand, within ABZR87_RS13330 at 2826.981 kb on - strand, within ABZR87_RS13330 at 2826.981 kb on - strand, within ABZR87_RS13330 at 2826.981 kb on - strand, within ABZR87_RS13330 at 2827.132 kb on + strand at 2827.132 kb on + strand at 2827.133 kb on - strand at 2827.133 kb on - strand at 2827.133 kb on - strand at 2827.133 kb on - strand at 2827.187 kb on + strand at 2827.187 kb on + strand at 2827.187 kb on + strand at 2827.187 kb on + strand at 2827.188 kb on - strand at 2827.188 kb on - strand at 2827.376 kb on + strand, within ABZR87_RS13335 at 2827.377 kb on - strand, within ABZR87_RS13335 at 2827.535 kb on + strand, within ABZR87_RS13335 at 2827.535 kb on + strand, within ABZR87_RS13335 at 2827.535 kb on + strand, within ABZR87_RS13335 at 2827.536 kb on - strand, within ABZR87_RS13335 at 2827.536 kb on - strand, within ABZR87_RS13335 at 2827.942 kb on - strand at 2827.942 kb on - strand at 2827.953 kb on + strand at 2827.954 kb on - strand at 2827.954 kb on - strand at 2827.996 kb on - strand at 2827.996 kb on - strand at 2828.253 kb on + strand at 2828.253 kb on + strand at 2828.254 kb on - strand at 2828.254 kb on - strand at 2828.379 kb on + strand, within ABZR87_RS13340 at 2828.379 kb on + strand, within ABZR87_RS13340 at 2828.380 kb on - strand, within ABZR87_RS13340 at 2828.380 kb on - strand, within ABZR87_RS13340 at 2828.380 kb on - strand, within ABZR87_RS13340 at 2828.380 kb on - strand, within ABZR87_RS13340 at 2828.389 kb on - strand, within ABZR87_RS13340 at 2828.389 kb on - strand, within ABZR87_RS13340 at 2828.706 kb on + strand, within ABZR87_RS13340 at 2828.709 kb on + strand, within ABZR87_RS13340 at 2828.709 kb on + strand, within ABZR87_RS13340 at 2828.709 kb on + strand, within ABZR87_RS13340 at 2828.710 kb on - strand, within ABZR87_RS13340 at 2828.710 kb on - strand, within ABZR87_RS13340 at 2828.715 kb on + strand, within ABZR87_RS13340 at 2828.716 kb on - strand, within ABZR87_RS13340 at 2828.716 kb on - strand, within ABZR87_RS13340 at 2828.717 kb on + strand, within ABZR87_RS13340 at 2828.717 kb on + strand, within ABZR87_RS13340 at 2828.718 kb on - strand, within ABZR87_RS13340 at 2828.718 kb on - strand, within ABZR87_RS13340
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 2,826,228 + ABZR87_RS13325 0.70 -0.3 2,826,228 + ABZR87_RS13325 0.70 -1.3 2,826,232 - ABZR87_RS13325 0.71 -0.5 2,826,232 - ABZR87_RS13325 0.71 -0.0 2,826,257 - ABZR87_RS13325 0.72 +0.3 2,826,257 - ABZR87_RS13325 0.72 -1.2 2,826,257 - ABZR87_RS13325 0.72 +0.1 2,826,271 + ABZR87_RS13325 0.72 +1.0 2,826,272 - ABZR87_RS13325 0.72 -0.0 2,826,426 + ABZR87_RS13325 0.80 -0.4 2,826,427 - ABZR87_RS13325 0.80 +0.0 2,826,438 + ABZR87_RS13325 0.80 -1.7 2,826,438 + ABZR87_RS13325 0.80 -0.9 2,826,438 + ABZR87_RS13325 0.80 +0.1 2,826,438 + ABZR87_RS13325 0.80 +0.2 2,826,438 + ABZR87_RS13325 0.80 -0.3 2,826,438 + ABZR87_RS13325 0.80 -0.4 2,826,438 + ABZR87_RS13325 0.80 -0.1 2,826,438 + ABZR87_RS13325 0.80 -1.3 2,826,439 - ABZR87_RS13325 0.80 +1.1 2,826,439 - ABZR87_RS13325 0.80 -0.5 2,826,591 + ABZR87_RS13325 0.87 -0.0 2,826,591 + ABZR87_RS13325 0.87 -0.4 2,826,591 + ABZR87_RS13325 0.87 +0.2 2,826,592 - ABZR87_RS13325 0.87 -1.7 2,826,592 - ABZR87_RS13325 0.87 -0.1 2,826,592 - ABZR87_RS13325 0.87 +1.4 2,826,597 + ABZR87_RS13325 0.88 -2.3 2,826,598 - ABZR87_RS13325 0.88 +0.3 2,826,598 - ABZR87_RS13325 0.88 +1.0 2,826,617 - ABZR87_RS13325 0.89 +0.4 2,826,712 + -0.8 2,826,713 - +0.0 2,826,713 - -0.8 2,826,713 - -0.2 2,826,713 - +0.8 2,826,949 - +0.4 2,826,980 + ABZR87_RS13330 0.16 -0.8 2,826,980 + ABZR87_RS13330 0.16 +0.3 2,826,981 - ABZR87_RS13330 0.17 +0.3 2,826,981 - ABZR87_RS13330 0.17 +0.2 2,826,981 - ABZR87_RS13330 0.17 -1.3 2,827,132 + -1.4 2,827,132 + -0.8 2,827,133 - +0.5 2,827,133 - -0.1 2,827,133 - +0.0 2,827,133 - -0.5 2,827,187 + -2.1 2,827,187 + -0.3 2,827,187 + +0.0 2,827,187 + -0.6 2,827,188 - -0.9 2,827,188 - -0.2 2,827,376 + ABZR87_RS13335 0.25 -1.8 2,827,377 - ABZR87_RS13335 0.25 -1.9 2,827,535 + ABZR87_RS13335 0.46 -0.6 2,827,535 + ABZR87_RS13335 0.46 -0.1 2,827,535 + ABZR87_RS13335 0.46 -1.7 2,827,536 - ABZR87_RS13335 0.46 -3.0 2,827,536 - ABZR87_RS13335 0.46 -0.1 2,827,942 - +0.2 2,827,942 - +0.0 2,827,953 + -0.3 2,827,954 - -0.1 2,827,954 - -0.3 2,827,996 - -0.7 2,827,996 - +0.9 2,828,253 + -0.7 2,828,253 + +3.0 2,828,254 - +0.2 2,828,254 - +0.1 2,828,379 + ABZR87_RS13340 0.14 -1.8 2,828,379 + ABZR87_RS13340 0.14 +0.7 2,828,380 - ABZR87_RS13340 0.14 -1.0 2,828,380 - ABZR87_RS13340 0.14 +1.3 2,828,380 - ABZR87_RS13340 0.14 +1.5 2,828,380 - ABZR87_RS13340 0.14 +0.7 2,828,389 - ABZR87_RS13340 0.14 -0.0 2,828,389 - ABZR87_RS13340 0.14 -0.3 2,828,706 + ABZR87_RS13340 0.28 -0.3 2,828,709 + ABZR87_RS13340 0.28 -0.5 2,828,709 + ABZR87_RS13340 0.28 -2.3 2,828,709 + ABZR87_RS13340 0.28 -2.3 2,828,710 - ABZR87_RS13340 0.28 -0.5 2,828,710 - ABZR87_RS13340 0.28 -0.1 2,828,715 + ABZR87_RS13340 0.28 +1.1 2,828,716 - ABZR87_RS13340 0.28 -0.9 2,828,716 - ABZR87_RS13340 0.28 -1.0 2,828,717 + ABZR87_RS13340 0.28 +0.4 2,828,717 + ABZR87_RS13340 0.28 -0.4 2,828,718 - ABZR87_RS13340 0.28 +0.0 2,828,718 - ABZR87_RS13340 0.28 +0.1
Or see this region's nucleotide sequence