Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13295 and ABZR87_RS13300 are separated by 89 nucleotides ABZR87_RS13300 and ABZR87_RS13305 are separated by 270 nucleotides ABZR87_RS13305 and ABZR87_RS13310 are separated by 4 nucleotides
ABZR87_RS13295: ABZR87_RS13295 - acetyl-CoA C-acetyltransferase, at 2,818,300 to 2,819,481
_RS13295
ABZR87_RS13300: ABZR87_RS13300 - class I poly(R)-hydroxyalkanoic acid synthase, at 2,819,571 to 2,821,364
_RS13300
ABZR87_RS13305: ABZR87_RS13305 - hypothetical protein, at 2,821,635 to 2,821,871
_RS13305
ABZR87_RS13310: ABZR87_RS13310 - peptidoglycan editing factor PgeF, at 2,821,876 to 2,822,685
_RS13310
Position (kb)
2819
2820
2821
2822 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2818.647 kb on - strand, within ABZR87_RS13295 at 2818.979 kb on + strand, within ABZR87_RS13295 at 2818.980 kb on - strand, within ABZR87_RS13295 at 2819.018 kb on + strand, within ABZR87_RS13295 at 2819.019 kb on - strand, within ABZR87_RS13295 at 2819.019 kb on - strand, within ABZR87_RS13295 at 2819.019 kb on - strand, within ABZR87_RS13295 at 2819.027 kb on + strand, within ABZR87_RS13295 at 2819.028 kb on - strand, within ABZR87_RS13295 at 2819.028 kb on - strand, within ABZR87_RS13295 at 2819.028 kb on - strand, within ABZR87_RS13295 at 2819.462 kb on - strand at 2819.462 kb on - strand at 2819.488 kb on - strand at 2819.488 kb on - strand at 2819.488 kb on - strand at 2819.572 kb on + strand at 2819.572 kb on + strand at 2819.573 kb on - strand at 2819.875 kb on + strand, within ABZR87_RS13300 at 2819.875 kb on + strand, within ABZR87_RS13300 at 2819.917 kb on + strand, within ABZR87_RS13300 at 2819.917 kb on + strand, within ABZR87_RS13300 at 2819.917 kb on + strand, within ABZR87_RS13300 at 2819.952 kb on + strand, within ABZR87_RS13300 at 2820.007 kb on + strand, within ABZR87_RS13300 at 2820.007 kb on + strand, within ABZR87_RS13300 at 2820.011 kb on + strand, within ABZR87_RS13300 at 2820.011 kb on + strand, within ABZR87_RS13300 at 2820.022 kb on + strand, within ABZR87_RS13300 at 2820.022 kb on + strand, within ABZR87_RS13300 at 2820.022 kb on + strand, within ABZR87_RS13300 at 2820.022 kb on + strand, within ABZR87_RS13300 at 2820.109 kb on + strand, within ABZR87_RS13300 at 2820.124 kb on + strand, within ABZR87_RS13300 at 2820.124 kb on + strand, within ABZR87_RS13300 at 2820.124 kb on + strand, within ABZR87_RS13300 at 2820.124 kb on + strand, within ABZR87_RS13300 at 2820.124 kb on + strand, within ABZR87_RS13300 at 2820.124 kb on + strand, within ABZR87_RS13300 at 2820.284 kb on + strand, within ABZR87_RS13300 at 2820.284 kb on + strand, within ABZR87_RS13300 at 2820.285 kb on - strand, within ABZR87_RS13300 at 2820.466 kb on + strand, within ABZR87_RS13300 at 2820.466 kb on + strand, within ABZR87_RS13300 at 2820.550 kb on + strand, within ABZR87_RS13300 at 2820.589 kb on + strand, within ABZR87_RS13300 at 2820.589 kb on + strand, within ABZR87_RS13300 at 2820.592 kb on + strand, within ABZR87_RS13300 at 2820.592 kb on + strand, within ABZR87_RS13300 at 2820.596 kb on + strand, within ABZR87_RS13300 at 2820.596 kb on + strand, within ABZR87_RS13300 at 2820.596 kb on + strand, within ABZR87_RS13300 at 2820.596 kb on + strand, within ABZR87_RS13300 at 2820.596 kb on + strand, within ABZR87_RS13300 at 2820.597 kb on - strand, within ABZR87_RS13300 at 2820.597 kb on - strand, within ABZR87_RS13300 at 2820.676 kb on + strand, within ABZR87_RS13300 at 2820.676 kb on + strand, within ABZR87_RS13300 at 2820.965 kb on + strand, within ABZR87_RS13300 at 2820.982 kb on + strand, within ABZR87_RS13300 at 2820.982 kb on + strand, within ABZR87_RS13300 at 2820.983 kb on - strand, within ABZR87_RS13300 at 2820.983 kb on - strand, within ABZR87_RS13300 at 2820.983 kb on - strand, within ABZR87_RS13300 at 2820.997 kb on + strand, within ABZR87_RS13300 at 2820.998 kb on - strand, within ABZR87_RS13300 at 2821.003 kb on + strand, within ABZR87_RS13300 at 2821.118 kb on - strand, within ABZR87_RS13300 at 2821.286 kb on + strand at 2821.287 kb on - strand at 2821.328 kb on + strand at 2821.329 kb on - strand at 2821.329 kb on - strand at 2821.364 kb on + strand at 2821.365 kb on - strand at 2821.420 kb on + strand at 2821.421 kb on - strand at 2821.421 kb on - strand at 2821.421 kb on - strand at 2821.424 kb on - strand at 2821.471 kb on + strand at 2821.472 kb on - strand at 2821.548 kb on + strand at 2821.549 kb on - strand at 2821.583 kb on - strand at 2821.637 kb on - strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.638 kb on + strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.639 kb on - strand at 2821.640 kb on + strand at 2821.640 kb on + strand at 2821.640 kb on + strand at 2821.640 kb on + strand at 2821.640 kb on + strand at 2821.640 kb on + strand at 2821.641 kb on - strand at 2821.662 kb on + strand, within ABZR87_RS13305 at 2821.663 kb on - strand, within ABZR87_RS13305 at 2821.663 kb on - strand, within ABZR87_RS13305 at 2821.729 kb on - strand, within ABZR87_RS13305 at 2821.729 kb on - strand, within ABZR87_RS13305 at 2821.729 kb on - strand, within ABZR87_RS13305 at 2821.729 kb on - strand, within ABZR87_RS13305 at 2821.744 kb on + strand, within ABZR87_RS13305 at 2821.745 kb on - strand, within ABZR87_RS13305 at 2821.745 kb on - strand, within ABZR87_RS13305 at 2821.931 kb on + strand at 2821.932 kb on - strand at 2821.937 kb on + strand at 2821.938 kb on - strand at 2821.938 kb on - strand at 2821.938 kb on - strand at 2821.938 kb on - strand at 2821.980 kb on - strand, within ABZR87_RS13310 at 2821.980 kb on - strand, within ABZR87_RS13310 at 2821.989 kb on + strand, within ABZR87_RS13310 at 2822.027 kb on + strand, within ABZR87_RS13310 at 2822.027 kb on + strand, within ABZR87_RS13310 at 2822.027 kb on + strand, within ABZR87_RS13310 at 2822.028 kb on - strand, within ABZR87_RS13310 at 2822.028 kb on - strand, within ABZR87_RS13310 at 2822.028 kb on - strand, within ABZR87_RS13310 at 2822.028 kb on - strand, within ABZR87_RS13310 at 2822.028 kb on - strand, within ABZR87_RS13310 at 2822.028 kb on - strand, within ABZR87_RS13310 at 2822.115 kb on + strand, within ABZR87_RS13310 at 2822.115 kb on + strand, within ABZR87_RS13310 at 2822.116 kb on - strand, within ABZR87_RS13310 at 2822.266 kb on + strand, within ABZR87_RS13310 at 2822.266 kb on + strand, within ABZR87_RS13310 at 2822.266 kb on + strand, within ABZR87_RS13310 at 2822.266 kb on + strand, within ABZR87_RS13310
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 2,818,647 - ABZR87_RS13295 0.29 +0.7 2,818,979 + ABZR87_RS13295 0.57 -2.3 2,818,980 - ABZR87_RS13295 0.58 +0.9 2,819,018 + ABZR87_RS13295 0.61 -1.8 2,819,019 - ABZR87_RS13295 0.61 +0.3 2,819,019 - ABZR87_RS13295 0.61 +1.1 2,819,019 - ABZR87_RS13295 0.61 +0.3 2,819,027 + ABZR87_RS13295 0.62 -1.1 2,819,028 - ABZR87_RS13295 0.62 +0.2 2,819,028 - ABZR87_RS13295 0.62 -0.1 2,819,028 - ABZR87_RS13295 0.62 +1.1 2,819,462 - +1.8 2,819,462 - +0.4 2,819,488 - +0.7 2,819,488 - +0.6 2,819,488 - +0.8 2,819,572 + -0.0 2,819,572 + +0.3 2,819,573 - +0.6 2,819,875 + ABZR87_RS13300 0.17 -1.9 2,819,875 + ABZR87_RS13300 0.17 -3.0 2,819,917 + ABZR87_RS13300 0.19 -3.6 2,819,917 + ABZR87_RS13300 0.19 -0.3 2,819,917 + ABZR87_RS13300 0.19 -3.3 2,819,952 + ABZR87_RS13300 0.21 -3.0 2,820,007 + ABZR87_RS13300 0.24 -3.5 2,820,007 + ABZR87_RS13300 0.24 -3.3 2,820,011 + ABZR87_RS13300 0.25 -4.8 2,820,011 + ABZR87_RS13300 0.25 -1.2 2,820,022 + ABZR87_RS13300 0.25 -2.2 2,820,022 + ABZR87_RS13300 0.25 +0.2 2,820,022 + ABZR87_RS13300 0.25 -2.3 2,820,022 + ABZR87_RS13300 0.25 -2.5 2,820,109 + ABZR87_RS13300 0.30 -2.2 2,820,124 + ABZR87_RS13300 0.31 -0.9 2,820,124 + ABZR87_RS13300 0.31 -0.3 2,820,124 + ABZR87_RS13300 0.31 -1.9 2,820,124 + ABZR87_RS13300 0.31 +0.7 2,820,124 + ABZR87_RS13300 0.31 -1.7 2,820,124 + ABZR87_RS13300 0.31 -0.3 2,820,284 + ABZR87_RS13300 0.40 -2.2 2,820,284 + ABZR87_RS13300 0.40 -1.9 2,820,285 - ABZR87_RS13300 0.40 -2.5 2,820,466 + ABZR87_RS13300 0.50 -1.9 2,820,466 + ABZR87_RS13300 0.50 -2.7 2,820,550 + ABZR87_RS13300 0.55 -2.8 2,820,589 + ABZR87_RS13300 0.57 +0.7 2,820,589 + ABZR87_RS13300 0.57 -4.7 2,820,592 + ABZR87_RS13300 0.57 -2.2 2,820,592 + ABZR87_RS13300 0.57 +0.4 2,820,596 + ABZR87_RS13300 0.57 -3.9 2,820,596 + ABZR87_RS13300 0.57 -2.7 2,820,596 + ABZR87_RS13300 0.57 -4.3 2,820,596 + ABZR87_RS13300 0.57 -2.7 2,820,596 + ABZR87_RS13300 0.57 -1.2 2,820,597 - ABZR87_RS13300 0.57 -4.0 2,820,597 - ABZR87_RS13300 0.57 -3.0 2,820,676 + ABZR87_RS13300 0.62 -1.3 2,820,676 + ABZR87_RS13300 0.62 -1.3 2,820,965 + ABZR87_RS13300 0.78 -3.2 2,820,982 + ABZR87_RS13300 0.79 -0.9 2,820,982 + ABZR87_RS13300 0.79 -2.5 2,820,983 - ABZR87_RS13300 0.79 -0.9 2,820,983 - ABZR87_RS13300 0.79 -2.3 2,820,983 - ABZR87_RS13300 0.79 -3.0 2,820,997 + ABZR87_RS13300 0.79 -1.7 2,820,998 - ABZR87_RS13300 0.80 -1.5 2,821,003 + ABZR87_RS13300 0.80 -0.9 2,821,118 - ABZR87_RS13300 0.86 -3.7 2,821,286 + -0.3 2,821,287 - -2.0 2,821,328 + -0.3 2,821,329 - -2.5 2,821,329 - -3.6 2,821,364 + -3.3 2,821,365 - +0.8 2,821,420 + -2.7 2,821,421 - -1.4 2,821,421 - +0.2 2,821,421 - -0.3 2,821,424 - -1.5 2,821,471 + -2.3 2,821,472 - +0.6 2,821,548 + -0.8 2,821,549 - +0.3 2,821,583 - +0.0 2,821,637 - +1.0 2,821,638 + +0.1 2,821,638 + -0.3 2,821,638 + +0.6 2,821,638 + -0.1 2,821,638 + +0.2 2,821,638 + -0.3 2,821,638 + -0.6 2,821,638 + -0.1 2,821,638 + -0.1 2,821,638 + -0.2 2,821,638 + -0.1 2,821,638 + +0.5 2,821,638 + -0.2 2,821,638 + +1.1 2,821,638 + +0.4 2,821,638 + +0.5 2,821,638 + +0.1 2,821,638 + -0.6 2,821,638 + +0.5 2,821,639 - +0.5 2,821,639 - +0.2 2,821,639 - +0.4 2,821,639 - +1.5 2,821,639 - -1.2 2,821,639 - +1.2 2,821,639 - +0.5 2,821,639 - +0.7 2,821,639 - +2.5 2,821,639 - +0.1 2,821,639 - +0.7 2,821,639 - +0.3 2,821,639 - -0.7 2,821,639 - -1.5 2,821,639 - +0.1 2,821,639 - +0.1 2,821,639 - +1.5 2,821,639 - +0.0 2,821,639 - -0.2 2,821,640 + +0.5 2,821,640 + +0.5 2,821,640 + +0.1 2,821,640 + +1.4 2,821,640 + -0.6 2,821,640 + -0.2 2,821,641 - +0.7 2,821,662 + ABZR87_RS13305 0.11 +1.0 2,821,663 - ABZR87_RS13305 0.12 -0.2 2,821,663 - ABZR87_RS13305 0.12 -0.5 2,821,729 - ABZR87_RS13305 0.40 +0.2 2,821,729 - ABZR87_RS13305 0.40 -2.5 2,821,729 - ABZR87_RS13305 0.40 -1.2 2,821,729 - ABZR87_RS13305 0.40 -0.6 2,821,744 + ABZR87_RS13305 0.46 -0.9 2,821,745 - ABZR87_RS13305 0.46 +1.0 2,821,745 - ABZR87_RS13305 0.46 +0.6 2,821,931 + +1.4 2,821,932 - +0.9 2,821,937 + +1.4 2,821,938 - +2.5 2,821,938 - +1.5 2,821,938 - +1.5 2,821,938 - +1.0 2,821,980 - ABZR87_RS13310 0.13 +0.5 2,821,980 - ABZR87_RS13310 0.13 +0.8 2,821,989 + ABZR87_RS13310 0.14 +1.1 2,822,027 + ABZR87_RS13310 0.19 +2.4 2,822,027 + ABZR87_RS13310 0.19 +1.1 2,822,027 + ABZR87_RS13310 0.19 +1.1 2,822,028 - ABZR87_RS13310 0.19 +1.5 2,822,028 - ABZR87_RS13310 0.19 +0.9 2,822,028 - ABZR87_RS13310 0.19 +2.1 2,822,028 - ABZR87_RS13310 0.19 +0.6 2,822,028 - ABZR87_RS13310 0.19 +1.1 2,822,028 - ABZR87_RS13310 0.19 +1.7 2,822,115 + ABZR87_RS13310 0.30 +1.0 2,822,115 + ABZR87_RS13310 0.30 +0.1 2,822,116 - ABZR87_RS13310 0.30 +1.2 2,822,266 + ABZR87_RS13310 0.48 +1.7 2,822,266 + ABZR87_RS13310 0.48 +1.3 2,822,266 + ABZR87_RS13310 0.48 +0.9 2,822,266 + ABZR87_RS13310 0.48 -0.1
Or see this region's nucleotide sequence