Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11245 and ABZR87_RS11250 are separated by 74 nucleotides ABZR87_RS11250 and ABZR87_RS11255 are separated by 24 nucleotides
ABZR87_RS11245: ABZR87_RS11245 - translational GTPase TypA, at 2,388,214 to 2,390,034
_RS11245
ABZR87_RS11250: ABZR87_RS11250 - cystathionine beta-lyase, at 2,390,109 to 2,391,296
_RS11250
ABZR87_RS11255: ABZR87_RS11255 - rhodanese-like domain-containing protein, at 2,391,321 to 2,392,910
_RS11255
Position (kb)
2390
2391
2392 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2389.345 kb on + strand, within ABZR87_RS11245 at 2389.345 kb on + strand, within ABZR87_RS11245 at 2389.521 kb on + strand, within ABZR87_RS11245 at 2389.627 kb on + strand, within ABZR87_RS11245 at 2389.628 kb on - strand, within ABZR87_RS11245 at 2389.628 kb on - strand, within ABZR87_RS11245 at 2389.628 kb on - strand, within ABZR87_RS11245 at 2389.768 kb on + strand, within ABZR87_RS11245 at 2389.769 kb on - strand, within ABZR87_RS11245 at 2389.913 kb on - strand at 2390.539 kb on + strand, within ABZR87_RS11250 at 2390.539 kb on + strand, within ABZR87_RS11250 at 2390.657 kb on - strand, within ABZR87_RS11250 at 2390.657 kb on - strand, within ABZR87_RS11250 at 2390.657 kb on - strand, within ABZR87_RS11250 at 2390.707 kb on + strand, within ABZR87_RS11250 at 2390.708 kb on - strand, within ABZR87_RS11250 at 2390.708 kb on - strand, within ABZR87_RS11250 at 2390.708 kb on - strand, within ABZR87_RS11250 at 2390.800 kb on + strand, within ABZR87_RS11250 at 2390.800 kb on + strand, within ABZR87_RS11250 at 2390.801 kb on - strand, within ABZR87_RS11250 at 2390.801 kb on - strand, within ABZR87_RS11250 at 2390.827 kb on + strand, within ABZR87_RS11250 at 2390.827 kb on + strand, within ABZR87_RS11250 at 2390.828 kb on - strand, within ABZR87_RS11250 at 2390.828 kb on - strand, within ABZR87_RS11250 at 2390.828 kb on - strand, within ABZR87_RS11250 at 2390.828 kb on - strand, within ABZR87_RS11250 at 2390.828 kb on - strand, within ABZR87_RS11250 at 2390.887 kb on + strand, within ABZR87_RS11250 at 2390.887 kb on + strand, within ABZR87_RS11250 at 2390.887 kb on + strand, within ABZR87_RS11250 at 2390.888 kb on - strand, within ABZR87_RS11250 at 2390.898 kb on + strand, within ABZR87_RS11250 at 2390.947 kb on + strand, within ABZR87_RS11250 at 2390.967 kb on + strand, within ABZR87_RS11250 at 2390.967 kb on + strand, within ABZR87_RS11250 at 2390.967 kb on + strand, within ABZR87_RS11250 at 2390.968 kb on - strand, within ABZR87_RS11250 at 2391.079 kb on - strand, within ABZR87_RS11250 at 2391.112 kb on + strand, within ABZR87_RS11250 at 2391.112 kb on + strand, within ABZR87_RS11250 at 2391.301 kb on + strand at 2391.301 kb on + strand at 2391.301 kb on + strand at 2391.302 kb on - strand at 2391.410 kb on - strand at 2391.463 kb on + strand at 2391.463 kb on + strand at 2391.464 kb on - strand at 2391.514 kb on + strand, within ABZR87_RS11255 at 2391.515 kb on - strand, within ABZR87_RS11255 at 2391.871 kb on + strand, within ABZR87_RS11255 at 2391.871 kb on + strand, within ABZR87_RS11255 at 2391.871 kb on + strand, within ABZR87_RS11255 at 2391.871 kb on + strand, within ABZR87_RS11255 at 2391.871 kb on + strand, within ABZR87_RS11255 at 2391.872 kb on - strand, within ABZR87_RS11255 at 2391.872 kb on - strand, within ABZR87_RS11255 at 2391.872 kb on - strand, within ABZR87_RS11255 at 2391.872 kb on - strand, within ABZR87_RS11255 at 2391.970 kb on + strand, within ABZR87_RS11255 at 2391.971 kb on - strand, within ABZR87_RS11255 at 2392.247 kb on - strand, within ABZR87_RS11255
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 2,389,345 + ABZR87_RS11245 0.62 -0.3 2,389,345 + ABZR87_RS11245 0.62 -3.0 2,389,521 + ABZR87_RS11245 0.72 -2.8 2,389,627 + ABZR87_RS11245 0.78 -0.9 2,389,628 - ABZR87_RS11245 0.78 -3.5 2,389,628 - ABZR87_RS11245 0.78 -2.8 2,389,628 - ABZR87_RS11245 0.78 -2.0 2,389,768 + ABZR87_RS11245 0.85 -3.8 2,389,769 - ABZR87_RS11245 0.85 -3.5 2,389,913 - -3.9 2,390,539 + ABZR87_RS11250 0.36 +0.9 2,390,539 + ABZR87_RS11250 0.36 -0.0 2,390,657 - ABZR87_RS11250 0.46 +0.0 2,390,657 - ABZR87_RS11250 0.46 +0.3 2,390,657 - ABZR87_RS11250 0.46 +1.2 2,390,707 + ABZR87_RS11250 0.50 +0.4 2,390,708 - ABZR87_RS11250 0.50 -0.3 2,390,708 - ABZR87_RS11250 0.50 +0.3 2,390,708 - ABZR87_RS11250 0.50 -1.1 2,390,800 + ABZR87_RS11250 0.58 -0.8 2,390,800 + ABZR87_RS11250 0.58 +0.0 2,390,801 - ABZR87_RS11250 0.58 +0.9 2,390,801 - ABZR87_RS11250 0.58 -0.3 2,390,827 + ABZR87_RS11250 0.60 -0.1 2,390,827 + ABZR87_RS11250 0.60 -0.3 2,390,828 - ABZR87_RS11250 0.61 -0.2 2,390,828 - ABZR87_RS11250 0.61 +0.6 2,390,828 - ABZR87_RS11250 0.61 +0.2 2,390,828 - ABZR87_RS11250 0.61 +0.6 2,390,828 - ABZR87_RS11250 0.61 +0.7 2,390,887 + ABZR87_RS11250 0.65 +0.2 2,390,887 + ABZR87_RS11250 0.65 +0.5 2,390,887 + ABZR87_RS11250 0.65 +0.1 2,390,888 - ABZR87_RS11250 0.66 -0.6 2,390,898 + ABZR87_RS11250 0.66 -0.4 2,390,947 + ABZR87_RS11250 0.71 -0.9 2,390,967 + ABZR87_RS11250 0.72 -0.2 2,390,967 + ABZR87_RS11250 0.72 +0.3 2,390,967 + ABZR87_RS11250 0.72 +1.0 2,390,968 - ABZR87_RS11250 0.72 -0.3 2,391,079 - ABZR87_RS11250 0.82 -0.2 2,391,112 + ABZR87_RS11250 0.84 -0.7 2,391,112 + ABZR87_RS11250 0.84 -0.1 2,391,301 + +1.1 2,391,301 + +0.5 2,391,301 + +0.3 2,391,302 - +0.1 2,391,410 - +0.7 2,391,463 + -0.3 2,391,463 + -0.1 2,391,464 - -0.3 2,391,514 + ABZR87_RS11255 0.12 +0.6 2,391,515 - ABZR87_RS11255 0.12 +0.2 2,391,871 + ABZR87_RS11255 0.35 +0.1 2,391,871 + ABZR87_RS11255 0.35 -0.3 2,391,871 + ABZR87_RS11255 0.35 -0.9 2,391,871 + ABZR87_RS11255 0.35 +0.4 2,391,871 + ABZR87_RS11255 0.35 -2.1 2,391,872 - ABZR87_RS11255 0.35 -0.1 2,391,872 - ABZR87_RS11255 0.35 +0.3 2,391,872 - ABZR87_RS11255 0.35 +0.1 2,391,872 - ABZR87_RS11255 0.35 -0.1 2,391,970 + ABZR87_RS11255 0.41 -0.3 2,391,971 - ABZR87_RS11255 0.41 +0.3 2,392,247 - ABZR87_RS11255 0.58 -0.6
Or see this region's nucleotide sequence