Experiment: KB with L-alliin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0255 and Psyr_0256 are separated by 226 nucleotides Psyr_0256 and Psyr_0257 overlap by 1 nucleotides
Psyr_0255: Psyr_0255 - glutamate-cysteine ligase, at 269,298 to 270,905
_0255
Psyr_0256: Psyr_0256 - Phenylacetic acid degradation-related protein, at 271,132 to 271,515
_0256
Psyr_0257: Psyr_0257 - RNA binding S1, at 271,515 to 273,833
_0257
Position (kb) 271
272 Strain fitness (log2 ratio) -1
0
1 at 270.205 kb on + strand, within Psyr_0255 at 270.205 kb on + strand, within Psyr_0255 at 270.296 kb on - strand, within Psyr_0255 at 270.296 kb on - strand, within Psyr_0255 at 270.500 kb on - strand, within Psyr_0255 at 270.896 kb on - strand at 270.896 kb on - strand at 270.944 kb on + strand at 270.944 kb on + strand at 270.971 kb on - strand at 271.022 kb on - strand at 271.065 kb on - strand at 271.088 kb on + strand at 271.133 kb on + strand at 271.133 kb on + strand at 271.134 kb on - strand at 271.134 kb on - strand at 271.134 kb on - strand at 271.274 kb on + strand, within Psyr_0256 at 271.274 kb on + strand, within Psyr_0256 at 271.274 kb on + strand, within Psyr_0256 at 271.274 kb on + strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 271.275 kb on - strand, within Psyr_0256 at 272.432 kb on - strand, within Psyr_0257
Per-strain Table
Position Strand Gene LocusTag Fraction KB with L-alliin 10 mM remove 270,205 + Psyr_0255 0.56 +0.9 270,205 + Psyr_0255 0.56 -1.3 270,296 - Psyr_0255 0.62 -1.5 270,296 - Psyr_0255 0.62 +1.2 270,500 - Psyr_0255 0.75 -0.6 270,896 - -1.2 270,896 - +0.1 270,944 + -1.1 270,944 + +0.1 270,971 - -0.6 271,022 - +0.0 271,065 - +0.9 271,088 + +1.2 271,133 + +0.4 271,133 + -0.2 271,134 - -0.3 271,134 - -1.1 271,134 - +0.4 271,274 + Psyr_0256 0.37 -0.6 271,274 + Psyr_0256 0.37 +1.3 271,274 + Psyr_0256 0.37 -1.2 271,274 + Psyr_0256 0.37 +0.7 271,275 - Psyr_0256 0.37 +1.6 271,275 - Psyr_0256 0.37 -0.5 271,275 - Psyr_0256 0.37 +0.2 271,275 - Psyr_0256 0.37 +0.6 271,275 - Psyr_0256 0.37 +0.4 271,275 - Psyr_0256 0.37 -0.0 271,275 - Psyr_0256 0.37 +1.1 271,275 - Psyr_0256 0.37 +0.2 271,275 - Psyr_0256 0.37 -0.3 271,275 - Psyr_0256 0.37 +1.3 272,432 - Psyr_0257 0.40 +1.4
Or see this region's nucleotide sequence