Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28975 and AO353_28980 are separated by 3 nucleotides AO353_28980 and AO353_28985 are separated by 220 nucleotides AO353_28985 and AO353_28990 are separated by 348 nucleotides
AO353_28975: AO353_28975 - molybdopterin-binding protein, at 6,299,397 to 6,300,170
_28975
AO353_28980: AO353_28980 - cytochrome B, at 6,300,174 to 6,300,767
_28980
AO353_28985: AO353_28985 - hypothetical protein, at 6,300,988 to 6,301,422
_28985
AO353_28990: AO353_28990 - LOG family protein, at 6,301,771 to 6,303,144
_28990
Position (kb)
6300
6301
6302 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6300.153 kb on - strand at 6300.175 kb on + strand at 6300.242 kb on + strand, within AO353_28980 at 6300.318 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.371 kb on + strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.372 kb on - strand, within AO353_28980 at 6300.394 kb on + strand, within AO353_28980 at 6300.394 kb on + strand, within AO353_28980 at 6300.395 kb on - strand, within AO353_28980 at 6300.395 kb on - strand, within AO353_28980 at 6300.418 kb on + strand, within AO353_28980 at 6300.418 kb on + strand, within AO353_28980 at 6300.418 kb on + strand at 6300.419 kb on - strand, within AO353_28980 at 6300.419 kb on - strand, within AO353_28980 at 6300.419 kb on - strand, within AO353_28980 at 6300.419 kb on - strand, within AO353_28980 at 6300.419 kb on - strand, within AO353_28980 at 6300.419 kb on - strand, within AO353_28980 at 6300.419 kb on - strand, within AO353_28980 at 6300.530 kb on + strand, within AO353_28980 at 6300.530 kb on + strand, within AO353_28980 at 6300.530 kb on + strand, within AO353_28980 at 6300.531 kb on - strand, within AO353_28980 at 6300.544 kb on + strand, within AO353_28980 at 6300.544 kb on + strand, within AO353_28980 at 6300.545 kb on - strand, within AO353_28980 at 6300.551 kb on + strand, within AO353_28980 at 6300.552 kb on - strand, within AO353_28980 at 6300.567 kb on + strand, within AO353_28980 at 6300.667 kb on + strand, within AO353_28980 at 6300.667 kb on + strand, within AO353_28980 at 6300.667 kb on + strand, within AO353_28980 at 6300.667 kb on + strand, within AO353_28980 at 6300.667 kb on + strand, within AO353_28980 at 6300.667 kb on + strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.668 kb on - strand, within AO353_28980 at 6300.749 kb on + strand at 6300.749 kb on + strand at 6300.749 kb on + strand at 6300.749 kb on + strand at 6300.750 kb on - strand at 6300.750 kb on - strand at 6300.750 kb on - strand at 6300.750 kb on - strand at 6300.750 kb on - strand at 6300.761 kb on + strand at 6300.762 kb on - strand at 6300.762 kb on - strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.892 kb on + strand at 6300.893 kb on - strand at 6300.893 kb on - strand at 6300.893 kb on - strand at 6300.893 kb on - strand at 6300.893 kb on - strand at 6300.893 kb on - strand at 6300.893 kb on - strand at 6300.893 kb on - strand at 6300.896 kb on + strand at 6300.896 kb on + strand at 6300.896 kb on + strand at 6300.896 kb on + strand at 6300.896 kb on + strand at 6300.897 kb on - strand at 6300.897 kb on - strand at 6300.897 kb on - strand at 6300.897 kb on - strand at 6300.897 kb on - strand at 6300.897 kb on - strand at 6300.905 kb on + strand at 6300.906 kb on - strand at 6300.906 kb on - strand at 6300.918 kb on + strand at 6300.919 kb on - strand at 6300.930 kb on + strand at 6300.930 kb on + strand at 6300.931 kb on - strand at 6300.931 kb on - strand at 6301.202 kb on + strand, within AO353_28985 at 6301.202 kb on + strand, within AO353_28985 at 6301.202 kb on + strand, within AO353_28985 at 6301.202 kb on + strand, within AO353_28985 at 6301.202 kb on + strand, within AO353_28985 at 6301.202 kb on + strand, within AO353_28985 at 6301.202 kb on + strand, within AO353_28985 at 6301.202 kb on + strand, within AO353_28985 at 6301.203 kb on - strand, within AO353_28985 at 6301.203 kb on - strand, within AO353_28985 at 6301.203 kb on - strand, within AO353_28985 at 6301.361 kb on - strand, within AO353_28985 at 6301.471 kb on + strand at 6301.472 kb on - strand at 6301.486 kb on + strand at 6301.486 kb on + strand at 6301.486 kb on + strand at 6301.725 kb on + strand at 6301.725 kb on + strand at 6301.725 kb on + strand at 6301.725 kb on + strand at 6301.725 kb on + strand at 6301.726 kb on - strand at 6301.726 kb on - strand at 6301.726 kb on - strand at 6301.788 kb on + strand at 6301.879 kb on + strand at 6301.879 kb on + strand at 6301.879 kb on + strand at 6301.879 kb on + strand at 6301.880 kb on - strand at 6301.880 kb on - strand at 6301.880 kb on - strand at 6301.880 kb on - strand at 6302.104 kb on + strand, within AO353_28990 at 6302.105 kb on - strand, within AO353_28990 at 6302.105 kb on - strand, within AO353_28990 at 6302.105 kb on - strand, within AO353_28990 at 6302.105 kb on - strand, within AO353_28990 at 6302.105 kb on - strand, within AO353_28990 at 6302.105 kb on - strand, within AO353_28990 at 6302.167 kb on + strand, within AO353_28990 at 6302.167 kb on + strand, within AO353_28990 at 6302.168 kb on - strand, within AO353_28990 at 6302.168 kb on - strand, within AO353_28990 at 6302.168 kb on - strand, within AO353_28990 at 6302.168 kb on - strand, within AO353_28990 at 6302.266 kb on + strand, within AO353_28990 at 6302.272 kb on + strand, within AO353_28990 at 6302.272 kb on + strand, within AO353_28990 at 6302.272 kb on + strand, within AO353_28990 at 6302.272 kb on + strand, within AO353_28990 at 6302.272 kb on + strand, within AO353_28990 at 6302.272 kb on + strand, within AO353_28990 at 6302.273 kb on - strand, within AO353_28990 at 6302.273 kb on - strand, within AO353_28990 at 6302.273 kb on - strand, within AO353_28990 at 6302.273 kb on - strand, within AO353_28990
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 6,300,153 - +1.0 6,300,175 + -1.2 6,300,242 + AO353_28980 0.11 +0.4 6,300,318 + AO353_28980 0.24 -1.0 6,300,371 + AO353_28980 0.33 -1.2 6,300,371 + AO353_28980 0.33 -0.4 6,300,371 + AO353_28980 0.33 +0.4 6,300,371 + AO353_28980 0.33 -0.8 6,300,371 + AO353_28980 0.33 -1.2 6,300,371 + AO353_28980 0.33 +1.1 6,300,371 + AO353_28980 0.33 -1.2 6,300,371 + AO353_28980 0.33 +0.0 6,300,371 + AO353_28980 0.33 +0.2 6,300,371 + AO353_28980 0.33 -0.5 6,300,372 - AO353_28980 0.33 -0.9 6,300,372 - AO353_28980 0.33 +2.0 6,300,372 - AO353_28980 0.33 +1.4 6,300,372 - AO353_28980 0.33 +0.4 6,300,372 - AO353_28980 0.33 +0.1 6,300,372 - AO353_28980 0.33 -0.8 6,300,372 - AO353_28980 0.33 -0.8 6,300,372 - AO353_28980 0.33 -1.8 6,300,394 + AO353_28980 0.37 -2.2 6,300,394 + AO353_28980 0.37 +0.4 6,300,395 - AO353_28980 0.37 +1.8 6,300,395 - AO353_28980 0.37 -0.0 6,300,418 + AO353_28980 0.41 -0.2 6,300,418 + AO353_28980 0.41 +2.4 6,300,418 + -1.2 6,300,419 - AO353_28980 0.41 -2.5 6,300,419 - AO353_28980 0.41 -0.0 6,300,419 - AO353_28980 0.41 +0.4 6,300,419 - AO353_28980 0.41 +0.8 6,300,419 - AO353_28980 0.41 +0.8 6,300,419 - AO353_28980 0.41 +0.5 6,300,419 - AO353_28980 0.41 +0.6 6,300,530 + AO353_28980 0.60 +1.5 6,300,530 + AO353_28980 0.60 -0.7 6,300,530 + AO353_28980 0.60 +0.8 6,300,531 - AO353_28980 0.60 +0.6 6,300,544 + AO353_28980 0.62 -0.2 6,300,544 + AO353_28980 0.62 -1.2 6,300,545 - AO353_28980 0.62 -0.3 6,300,551 + AO353_28980 0.63 +0.2 6,300,552 - AO353_28980 0.64 -0.2 6,300,567 + AO353_28980 0.66 -0.6 6,300,667 + AO353_28980 0.83 +0.8 6,300,667 + AO353_28980 0.83 +0.6 6,300,667 + AO353_28980 0.83 -1.8 6,300,667 + AO353_28980 0.83 +0.8 6,300,667 + AO353_28980 0.83 -1.5 6,300,667 + AO353_28980 0.83 -0.8 6,300,668 - AO353_28980 0.83 -0.7 6,300,668 - AO353_28980 0.83 +0.8 6,300,668 - AO353_28980 0.83 -0.2 6,300,668 - AO353_28980 0.83 -1.2 6,300,668 - AO353_28980 0.83 -0.6 6,300,668 - AO353_28980 0.83 +0.1 6,300,668 - AO353_28980 0.83 +2.2 6,300,668 - AO353_28980 0.83 -0.2 6,300,749 + +0.2 6,300,749 + +1.3 6,300,749 + +1.4 6,300,749 + +0.4 6,300,750 - -0.2 6,300,750 - +0.2 6,300,750 - +0.4 6,300,750 - -1.2 6,300,750 - +0.4 6,300,761 + +1.4 6,300,762 - -0.2 6,300,762 - +2.4 6,300,892 + -1.2 6,300,892 + -0.9 6,300,892 + +2.6 6,300,892 + +0.9 6,300,892 + -0.2 6,300,892 + +0.4 6,300,892 + -1.2 6,300,892 + -0.7 6,300,892 + -0.2 6,300,892 + -0.2 6,300,892 + -1.8 6,300,893 - -0.3 6,300,893 - +0.8 6,300,893 - +0.8 6,300,893 - +0.8 6,300,893 - -0.6 6,300,893 - -0.1 6,300,893 - -0.6 6,300,893 - +0.8 6,300,896 + +2.1 6,300,896 + +0.6 6,300,896 + +0.8 6,300,896 + +0.6 6,300,896 + -1.8 6,300,897 - -0.7 6,300,897 - -1.7 6,300,897 - +0.5 6,300,897 - -0.2 6,300,897 - -0.2 6,300,897 - +0.4 6,300,905 + +0.6 6,300,906 - +0.8 6,300,906 - +1.2 6,300,918 + +0.0 6,300,919 - +0.4 6,300,930 + +0.2 6,300,930 + -1.3 6,300,931 - +0.2 6,300,931 - -0.2 6,301,202 + AO353_28985 0.49 -0.4 6,301,202 + AO353_28985 0.49 -1.8 6,301,202 + AO353_28985 0.49 -0.8 6,301,202 + AO353_28985 0.49 +0.2 6,301,202 + AO353_28985 0.49 -1.7 6,301,202 + AO353_28985 0.49 -0.2 6,301,202 + AO353_28985 0.49 -2.4 6,301,202 + AO353_28985 0.49 +0.4 6,301,203 - AO353_28985 0.49 -1.6 6,301,203 - AO353_28985 0.49 +0.4 6,301,203 - AO353_28985 0.49 -0.8 6,301,361 - AO353_28985 0.86 +0.1 6,301,471 + -0.5 6,301,472 - -0.2 6,301,486 + +2.4 6,301,486 + -0.2 6,301,486 + +1.6 6,301,725 + +0.6 6,301,725 + -0.4 6,301,725 + +0.0 6,301,725 + +0.6 6,301,725 + +0.0 6,301,726 - -1.2 6,301,726 - -1.4 6,301,726 - +1.2 6,301,788 + -0.2 6,301,879 + +1.1 6,301,879 + -0.7 6,301,879 + -0.4 6,301,879 + -0.2 6,301,880 - +0.2 6,301,880 - -1.2 6,301,880 - -1.0 6,301,880 - +0.3 6,302,104 + AO353_28990 0.24 +0.2 6,302,105 - AO353_28990 0.24 +0.4 6,302,105 - AO353_28990 0.24 -2.5 6,302,105 - AO353_28990 0.24 -0.2 6,302,105 - AO353_28990 0.24 +0.8 6,302,105 - AO353_28990 0.24 +0.4 6,302,105 - AO353_28990 0.24 +1.4 6,302,167 + AO353_28990 0.29 +0.6 6,302,167 + AO353_28990 0.29 +1.1 6,302,168 - AO353_28990 0.29 +0.1 6,302,168 - AO353_28990 0.29 -1.8 6,302,168 - AO353_28990 0.29 -1.8 6,302,168 - AO353_28990 0.29 +1.0 6,302,266 + AO353_28990 0.36 +0.8 6,302,272 + AO353_28990 0.36 -2.0 6,302,272 + AO353_28990 0.36 -1.4 6,302,272 + AO353_28990 0.36 +0.8 6,302,272 + AO353_28990 0.36 +0.3 6,302,272 + AO353_28990 0.36 -0.2 6,302,272 + AO353_28990 0.36 -0.2 6,302,273 - AO353_28990 0.37 +0.2 6,302,273 - AO353_28990 0.37 -0.2 6,302,273 - AO353_28990 0.37 -0.5 6,302,273 - AO353_28990 0.37 -0.5
Or see this region's nucleotide sequence