Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28605 and AO353_28610 are separated by 255 nucleotides AO353_28610 and AO353_28615 are separated by 78 nucleotides AO353_28615 and AO353_28620 are separated by 192 nucleotides
AO353_28605: AO353_28605 - phosphatase, at 6,230,955 to 6,231,890
_28605
AO353_28610: AO353_28610 - lysine transporter LysE, at 6,232,146 to 6,232,766
_28610
AO353_28615: AO353_28615 - MFS transporter, at 6,232,845 to 6,234,371
_28615
AO353_28620: AO353_28620 - LysR family transcriptional regulator, at 6,234,564 to 6,235,424
_28620
Position (kb)
6232
6233
6234
6235 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6232.109 kb on + strand at 6232.110 kb on - strand at 6232.139 kb on + strand at 6232.139 kb on + strand at 6232.139 kb on + strand at 6232.139 kb on + strand at 6232.139 kb on + strand at 6232.139 kb on + strand at 6232.140 kb on - strand at 6232.140 kb on - strand at 6232.140 kb on - strand at 6232.140 kb on - strand at 6232.140 kb on - strand at 6232.140 kb on - strand at 6232.151 kb on + strand at 6232.151 kb on + strand at 6232.152 kb on - strand at 6232.152 kb on - strand at 6232.152 kb on - strand at 6232.152 kb on - strand at 6232.152 kb on - strand at 6232.152 kb on - strand at 6232.160 kb on + strand at 6232.160 kb on + strand at 6232.160 kb on + strand at 6232.160 kb on + strand at 6232.161 kb on - strand at 6232.161 kb on - strand at 6232.161 kb on - strand at 6232.161 kb on - strand at 6232.161 kb on - strand at 6232.161 kb on - strand at 6232.161 kb on - strand at 6232.196 kb on - strand at 6232.253 kb on + strand, within AO353_28610 at 6232.253 kb on + strand, within AO353_28610 at 6232.253 kb on + strand, within AO353_28610 at 6232.254 kb on - strand, within AO353_28610 at 6232.254 kb on - strand, within AO353_28610 at 6232.300 kb on + strand, within AO353_28610 at 6232.300 kb on + strand, within AO353_28610 at 6232.301 kb on - strand, within AO353_28610 at 6232.301 kb on - strand, within AO353_28610 at 6232.301 kb on - strand, within AO353_28610 at 6232.301 kb on - strand at 6232.301 kb on - strand, within AO353_28610 at 6232.362 kb on + strand, within AO353_28610 at 6232.362 kb on + strand, within AO353_28610 at 6232.362 kb on + strand, within AO353_28610 at 6232.362 kb on + strand, within AO353_28610 at 6232.363 kb on - strand, within AO353_28610 at 6232.363 kb on - strand, within AO353_28610 at 6232.378 kb on - strand, within AO353_28610 at 6232.393 kb on - strand, within AO353_28610 at 6232.393 kb on - strand, within AO353_28610 at 6232.434 kb on - strand, within AO353_28610 at 6232.434 kb on - strand, within AO353_28610 at 6232.533 kb on + strand, within AO353_28610 at 6232.533 kb on + strand, within AO353_28610 at 6232.534 kb on - strand, within AO353_28610 at 6232.534 kb on - strand, within AO353_28610 at 6232.534 kb on - strand, within AO353_28610 at 6232.534 kb on - strand, within AO353_28610 at 6232.557 kb on - strand, within AO353_28610 at 6232.683 kb on - strand, within AO353_28610 at 6232.775 kb on + strand at 6232.776 kb on - strand at 6232.776 kb on - strand at 6232.806 kb on + strand at 6232.903 kb on - strand at 6232.927 kb on + strand at 6233.025 kb on - strand, within AO353_28615 at 6233.025 kb on - strand, within AO353_28615 at 6233.037 kb on - strand, within AO353_28615 at 6233.082 kb on + strand at 6233.082 kb on + strand, within AO353_28615 at 6233.082 kb on + strand, within AO353_28615 at 6233.082 kb on + strand, within AO353_28615 at 6233.082 kb on + strand, within AO353_28615 at 6233.083 kb on - strand, within AO353_28615 at 6233.083 kb on - strand, within AO353_28615 at 6233.083 kb on - strand, within AO353_28615 at 6233.083 kb on - strand, within AO353_28615 at 6233.083 kb on - strand, within AO353_28615 at 6233.083 kb on - strand, within AO353_28615 at 6233.095 kb on - strand, within AO353_28615 at 6233.108 kb on + strand, within AO353_28615 at 6233.108 kb on + strand, within AO353_28615 at 6233.108 kb on + strand, within AO353_28615 at 6233.109 kb on - strand, within AO353_28615 at 6233.109 kb on - strand, within AO353_28615 at 6233.109 kb on - strand, within AO353_28615 at 6233.162 kb on + strand, within AO353_28615 at 6233.162 kb on + strand, within AO353_28615 at 6233.162 kb on + strand, within AO353_28615 at 6233.163 kb on - strand, within AO353_28615 at 6233.163 kb on - strand, within AO353_28615 at 6233.163 kb on - strand, within AO353_28615 at 6233.163 kb on - strand, within AO353_28615 at 6233.163 kb on - strand, within AO353_28615 at 6233.163 kb on - strand, within AO353_28615 at 6233.229 kb on - strand, within AO353_28615 at 6233.235 kb on - strand, within AO353_28615 at 6233.243 kb on + strand, within AO353_28615 at 6233.352 kb on + strand, within AO353_28615 at 6233.352 kb on + strand, within AO353_28615 at 6233.352 kb on + strand, within AO353_28615 at 6233.352 kb on + strand, within AO353_28615 at 6233.352 kb on + strand, within AO353_28615 at 6233.353 kb on - strand, within AO353_28615 at 6233.353 kb on - strand, within AO353_28615 at 6233.353 kb on - strand, within AO353_28615 at 6233.353 kb on - strand, within AO353_28615 at 6233.353 kb on - strand, within AO353_28615 at 6233.445 kb on - strand, within AO353_28615 at 6233.446 kb on + strand, within AO353_28615 at 6233.446 kb on + strand, within AO353_28615 at 6233.447 kb on - strand, within AO353_28615 at 6233.447 kb on - strand, within AO353_28615 at 6233.515 kb on + strand, within AO353_28615 at 6233.515 kb on + strand, within AO353_28615 at 6233.515 kb on + strand, within AO353_28615 at 6233.516 kb on - strand, within AO353_28615 at 6233.516 kb on - strand, within AO353_28615 at 6233.516 kb on - strand, within AO353_28615 at 6233.516 kb on - strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.762 kb on + strand, within AO353_28615 at 6233.763 kb on - strand, within AO353_28615 at 6233.763 kb on - strand, within AO353_28615 at 6233.763 kb on - strand, within AO353_28615 at 6233.763 kb on - strand, within AO353_28615 at 6233.763 kb on - strand, within AO353_28615 at 6233.892 kb on + strand, within AO353_28615 at 6233.892 kb on + strand, within AO353_28615 at 6233.898 kb on - strand, within AO353_28615 at 6233.910 kb on - strand, within AO353_28615 at 6234.042 kb on - strand, within AO353_28615 at 6234.042 kb on - strand at 6234.042 kb on - strand, within AO353_28615 at 6234.042 kb on - strand, within AO353_28615 at 6234.042 kb on - strand, within AO353_28615 at 6234.042 kb on - strand, within AO353_28615 at 6234.107 kb on + strand, within AO353_28615 at 6234.107 kb on + strand, within AO353_28615 at 6234.108 kb on - strand, within AO353_28615 at 6234.108 kb on - strand, within AO353_28615 at 6234.108 kb on - strand, within AO353_28615 at 6234.169 kb on - strand, within AO353_28615 at 6234.169 kb on - strand, within AO353_28615 at 6234.184 kb on - strand, within AO353_28615 at 6234.187 kb on - strand, within AO353_28615 at 6234.187 kb on - strand, within AO353_28615 at 6234.208 kb on + strand, within AO353_28615 at 6234.208 kb on + strand, within AO353_28615 at 6234.208 kb on + strand, within AO353_28615 at 6234.208 kb on + strand, within AO353_28615 at 6234.209 kb on - strand, within AO353_28615 at 6234.228 kb on + strand at 6234.228 kb on + strand at 6234.228 kb on + strand at 6234.228 kb on + strand at 6234.228 kb on + strand at 6234.228 kb on + strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.229 kb on - strand at 6234.230 kb on + strand at 6234.230 kb on + strand at 6234.231 kb on - strand at 6234.231 kb on - strand at 6234.231 kb on - strand at 6234.231 kb on - strand at 6234.472 kb on + strand at 6234.472 kb on + strand at 6234.473 kb on - strand at 6234.473 kb on - strand at 6234.473 kb on - strand at 6234.523 kb on - strand at 6234.531 kb on - strand at 6234.562 kb on + strand at 6234.562 kb on + strand at 6234.922 kb on + strand, within AO353_28620 at 6234.922 kb on + strand, within AO353_28620 at 6234.923 kb on - strand, within AO353_28620 at 6234.923 kb on - strand, within AO353_28620 at 6234.923 kb on - strand, within AO353_28620 at 6234.923 kb on - strand, within AO353_28620 at 6234.934 kb on + strand, within AO353_28620 at 6234.934 kb on + strand, within AO353_28620 at 6234.934 kb on + strand, within AO353_28620 at 6234.934 kb on + strand, within AO353_28620 at 6234.934 kb on + strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.935 kb on - strand, within AO353_28620 at 6234.949 kb on - strand, within AO353_28620 at 6234.949 kb on - strand, within AO353_28620 at 6235.193 kb on + strand, within AO353_28620 at 6235.193 kb on + strand, within AO353_28620 at 6235.193 kb on + strand, within AO353_28620 at 6235.280 kb on + strand, within AO353_28620 at 6235.281 kb on - strand, within AO353_28620
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 6,232,109 + +0.7 6,232,110 - -1.0 6,232,139 + -0.2 6,232,139 + -1.7 6,232,139 + -0.2 6,232,139 + +0.4 6,232,139 + -1.2 6,232,139 + +0.3 6,232,140 - +0.0 6,232,140 - +0.8 6,232,140 - -0.4 6,232,140 - +2.0 6,232,140 - -0.5 6,232,140 - +0.2 6,232,151 + -1.2 6,232,151 + -1.6 6,232,152 - -1.2 6,232,152 - -0.9 6,232,152 - -0.7 6,232,152 - -0.5 6,232,152 - -0.2 6,232,152 - -0.2 6,232,160 + -0.4 6,232,160 + -2.5 6,232,160 + -0.7 6,232,160 + -0.6 6,232,161 - -1.2 6,232,161 - -0.7 6,232,161 - -0.6 6,232,161 - -2.6 6,232,161 - -0.6 6,232,161 - +1.4 6,232,161 - +0.3 6,232,196 - +0.6 6,232,253 + AO353_28610 0.17 +0.4 6,232,253 + AO353_28610 0.17 +1.4 6,232,253 + AO353_28610 0.17 -0.2 6,232,254 - AO353_28610 0.17 -0.4 6,232,254 - AO353_28610 0.17 -0.2 6,232,300 + AO353_28610 0.25 +0.8 6,232,300 + AO353_28610 0.25 +0.2 6,232,301 - AO353_28610 0.25 +1.4 6,232,301 - AO353_28610 0.25 -1.6 6,232,301 - AO353_28610 0.25 +0.7 6,232,301 - -1.2 6,232,301 - AO353_28610 0.25 +0.4 6,232,362 + AO353_28610 0.35 +1.4 6,232,362 + AO353_28610 0.35 -0.6 6,232,362 + AO353_28610 0.35 -0.2 6,232,362 + AO353_28610 0.35 -1.2 6,232,363 - AO353_28610 0.35 +0.5 6,232,363 - AO353_28610 0.35 -0.2 6,232,378 - AO353_28610 0.37 +0.6 6,232,393 - AO353_28610 0.40 +0.3 6,232,393 - AO353_28610 0.40 +0.6 6,232,434 - AO353_28610 0.46 +0.3 6,232,434 - AO353_28610 0.46 -2.2 6,232,533 + AO353_28610 0.62 -0.2 6,232,533 + AO353_28610 0.62 -0.1 6,232,534 - AO353_28610 0.62 -0.2 6,232,534 - AO353_28610 0.62 -0.9 6,232,534 - AO353_28610 0.62 -0.2 6,232,534 - AO353_28610 0.62 +0.0 6,232,557 - AO353_28610 0.66 +1.4 6,232,683 - AO353_28610 0.86 +2.2 6,232,775 + -1.2 6,232,776 - +0.0 6,232,776 - +1.4 6,232,806 + -0.8 6,232,903 - -0.8 6,232,927 + +1.8 6,233,025 - AO353_28615 0.12 -0.6 6,233,025 - AO353_28615 0.12 -0.5 6,233,037 - AO353_28615 0.13 +0.8 6,233,082 + +1.6 6,233,082 + AO353_28615 0.16 -1.0 6,233,082 + AO353_28615 0.16 -0.2 6,233,082 + AO353_28615 0.16 +2.0 6,233,082 + AO353_28615 0.16 +1.4 6,233,083 - AO353_28615 0.16 -1.0 6,233,083 - AO353_28615 0.16 +0.8 6,233,083 - AO353_28615 0.16 +1.2 6,233,083 - AO353_28615 0.16 -0.6 6,233,083 - AO353_28615 0.16 -0.6 6,233,083 - AO353_28615 0.16 -0.7 6,233,095 - AO353_28615 0.16 -0.4 6,233,108 + AO353_28615 0.17 +0.2 6,233,108 + AO353_28615 0.17 +0.3 6,233,108 + AO353_28615 0.17 +0.1 6,233,109 - AO353_28615 0.17 -1.2 6,233,109 - AO353_28615 0.17 +0.3 6,233,109 - AO353_28615 0.17 +0.4 6,233,162 + AO353_28615 0.21 -1.2 6,233,162 + AO353_28615 0.21 +2.2 6,233,162 + AO353_28615 0.21 +0.6 6,233,163 - AO353_28615 0.21 +0.3 6,233,163 - AO353_28615 0.21 -0.4 6,233,163 - AO353_28615 0.21 -0.4 6,233,163 - AO353_28615 0.21 -0.5 6,233,163 - AO353_28615 0.21 -0.6 6,233,163 - AO353_28615 0.21 +2.2 6,233,229 - AO353_28615 0.25 -1.4 6,233,235 - AO353_28615 0.26 -0.7 6,233,243 + AO353_28615 0.26 +0.4 6,233,352 + AO353_28615 0.33 -0.5 6,233,352 + AO353_28615 0.33 +1.0 6,233,352 + AO353_28615 0.33 -1.2 6,233,352 + AO353_28615 0.33 -0.2 6,233,352 + AO353_28615 0.33 -0.4 6,233,353 - AO353_28615 0.33 +1.2 6,233,353 - AO353_28615 0.33 -0.2 6,233,353 - AO353_28615 0.33 +0.3 6,233,353 - AO353_28615 0.33 +2.8 6,233,353 - AO353_28615 0.33 +2.5 6,233,445 - AO353_28615 0.39 -1.0 6,233,446 + AO353_28615 0.39 +1.0 6,233,446 + AO353_28615 0.39 +1.7 6,233,447 - AO353_28615 0.39 -1.9 6,233,447 - AO353_28615 0.39 -1.2 6,233,515 + AO353_28615 0.44 +1.6 6,233,515 + AO353_28615 0.44 -1.2 6,233,515 + AO353_28615 0.44 +2.2 6,233,516 - AO353_28615 0.44 +0.8 6,233,516 - AO353_28615 0.44 -1.0 6,233,516 - AO353_28615 0.44 -0.2 6,233,516 - AO353_28615 0.44 +0.2 6,233,762 + AO353_28615 0.60 +1.1 6,233,762 + AO353_28615 0.60 -0.8 6,233,762 + AO353_28615 0.60 -1.0 6,233,762 + AO353_28615 0.60 +0.0 6,233,762 + AO353_28615 0.60 +0.6 6,233,762 + AO353_28615 0.60 +1.8 6,233,762 + AO353_28615 0.60 -0.7 6,233,762 + AO353_28615 0.60 -0.6 6,233,762 + AO353_28615 0.60 -1.4 6,233,762 + AO353_28615 0.60 +0.4 6,233,763 - AO353_28615 0.60 +0.6 6,233,763 - AO353_28615 0.60 +1.3 6,233,763 - AO353_28615 0.60 -0.8 6,233,763 - AO353_28615 0.60 +0.1 6,233,763 - AO353_28615 0.60 +2.6 6,233,892 + AO353_28615 0.69 +0.4 6,233,892 + AO353_28615 0.69 -0.7 6,233,898 - AO353_28615 0.69 +0.8 6,233,910 - AO353_28615 0.70 -0.7 6,234,042 - AO353_28615 0.78 -0.3 6,234,042 - -0.2 6,234,042 - AO353_28615 0.78 +1.0 6,234,042 - AO353_28615 0.78 +1.8 6,234,042 - AO353_28615 0.78 -0.2 6,234,042 - AO353_28615 0.78 +1.1 6,234,107 + AO353_28615 0.83 -2.2 6,234,107 + AO353_28615 0.83 -0.2 6,234,108 - AO353_28615 0.83 -0.9 6,234,108 - AO353_28615 0.83 +0.7 6,234,108 - AO353_28615 0.83 +1.3 6,234,169 - AO353_28615 0.87 +1.4 6,234,169 - AO353_28615 0.87 -0.0 6,234,184 - AO353_28615 0.88 +2.6 6,234,187 - AO353_28615 0.88 -0.2 6,234,187 - AO353_28615 0.88 +0.0 6,234,208 + AO353_28615 0.89 +0.6 6,234,208 + AO353_28615 0.89 +0.4 6,234,208 + AO353_28615 0.89 +0.5 6,234,208 + AO353_28615 0.89 -1.0 6,234,209 - AO353_28615 0.89 -0.7 6,234,228 + -0.7 6,234,228 + -1.2 6,234,228 + -0.2 6,234,228 + +2.4 6,234,228 + +1.2 6,234,228 + -0.3 6,234,229 - -1.3 6,234,229 - +1.6 6,234,229 - +0.6 6,234,229 - -1.2 6,234,229 - +1.0 6,234,229 - +1.2 6,234,229 - +0.7 6,234,229 - +0.2 6,234,229 - -1.7 6,234,230 + -0.4 6,234,230 + -0.6 6,234,231 - -0.9 6,234,231 - -0.7 6,234,231 - +0.3 6,234,231 - -2.2 6,234,472 + +0.2 6,234,472 + +1.2 6,234,473 - +0.3 6,234,473 - -0.6 6,234,473 - +0.1 6,234,523 - -0.2 6,234,531 - -0.9 6,234,562 + -0.6 6,234,562 + -1.7 6,234,922 + AO353_28620 0.42 -1.4 6,234,922 + AO353_28620 0.42 +1.2 6,234,923 - AO353_28620 0.42 -0.6 6,234,923 - AO353_28620 0.42 -1.2 6,234,923 - AO353_28620 0.42 +0.6 6,234,923 - AO353_28620 0.42 -0.2 6,234,934 + AO353_28620 0.43 -0.2 6,234,934 + AO353_28620 0.43 +0.6 6,234,934 + AO353_28620 0.43 +0.4 6,234,934 + AO353_28620 0.43 +1.4 6,234,934 + AO353_28620 0.43 -1.2 6,234,935 - AO353_28620 0.43 -0.2 6,234,935 - AO353_28620 0.43 -1.6 6,234,935 - AO353_28620 0.43 -0.2 6,234,935 - AO353_28620 0.43 +0.5 6,234,935 - AO353_28620 0.43 +0.6 6,234,935 - AO353_28620 0.43 -1.2 6,234,935 - AO353_28620 0.43 +1.2 6,234,935 - AO353_28620 0.43 -0.2 6,234,935 - AO353_28620 0.43 +0.4 6,234,935 - AO353_28620 0.43 -1.7 6,234,949 - AO353_28620 0.45 -1.5 6,234,949 - AO353_28620 0.45 +2.0 6,235,193 + AO353_28620 0.73 -0.9 6,235,193 + AO353_28620 0.73 +0.7 6,235,193 + AO353_28620 0.73 +0.8 6,235,280 + AO353_28620 0.83 +1.0 6,235,281 - AO353_28620 0.83 +0.7
Or see this region's nucleotide sequence