Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28515 and AO353_28520 are separated by 315 nucleotides AO353_28520 and AO353_28525 are separated by 111 nucleotides
AO353_28515: AO353_28515 - malate:quinone oxidoreductase, at 6,212,599 to 6,214,248
_28515
AO353_28520: AO353_28520 - LysR family transcriptional regulator, at 6,214,564 to 6,215,445
_28520
AO353_28525: AO353_28525 - oxidoreductase, at 6,215,557 to 6,216,576
_28525
Position (kb)
6214
6215
6216 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 6213.577 kb on + strand, within AO353_28515 at 6213.986 kb on + strand, within AO353_28515 at 6213.986 kb on + strand, within AO353_28515 at 6213.987 kb on - strand, within AO353_28515 at 6214.112 kb on + strand at 6214.254 kb on - strand at 6214.256 kb on + strand at 6214.256 kb on + strand at 6214.256 kb on + strand at 6214.256 kb on + strand at 6214.257 kb on - strand at 6214.257 kb on - strand at 6214.257 kb on - strand at 6214.257 kb on - strand at 6214.257 kb on - strand at 6214.260 kb on + strand at 6214.260 kb on + strand at 6214.260 kb on + strand at 6214.265 kb on + strand at 6214.265 kb on + strand at 6214.265 kb on + strand at 6214.266 kb on - strand at 6214.281 kb on + strand at 6214.281 kb on + strand at 6214.281 kb on + strand at 6214.282 kb on - strand at 6214.282 kb on - strand at 6214.282 kb on - strand at 6214.282 kb on - strand at 6214.366 kb on - strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.371 kb on + strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.372 kb on - strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.373 kb on + strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.374 kb on - strand at 6214.404 kb on + strand at 6214.405 kb on - strand at 6214.429 kb on - strand at 6214.431 kb on + strand at 6214.431 kb on + strand at 6214.432 kb on - strand at 6214.432 kb on - strand at 6214.462 kb on + strand at 6214.462 kb on + strand at 6214.463 kb on - strand at 6214.463 kb on - strand at 6214.463 kb on - strand at 6214.463 kb on - strand at 6214.463 kb on - strand at 6214.474 kb on + strand at 6214.480 kb on - strand at 6214.525 kb on + strand at 6214.525 kb on + strand at 6214.525 kb on + strand at 6214.526 kb on - strand at 6214.526 kb on - strand at 6214.673 kb on + strand, within AO353_28520 at 6214.673 kb on + strand, within AO353_28520 at 6214.673 kb on + strand, within AO353_28520 at 6214.674 kb on - strand, within AO353_28520 at 6214.674 kb on - strand, within AO353_28520 at 6214.734 kb on + strand, within AO353_28520 at 6214.734 kb on + strand, within AO353_28520 at 6214.882 kb on - strand, within AO353_28520 at 6214.925 kb on + strand, within AO353_28520 at 6214.926 kb on - strand, within AO353_28520 at 6214.950 kb on - strand, within AO353_28520 at 6214.974 kb on - strand, within AO353_28520 at 6215.095 kb on - strand, within AO353_28520 at 6215.095 kb on - strand, within AO353_28520 at 6215.176 kb on + strand, within AO353_28520 at 6215.177 kb on - strand, within AO353_28520 at 6215.177 kb on - strand, within AO353_28520 at 6215.180 kb on - strand, within AO353_28520 at 6215.343 kb on + strand, within AO353_28520 at 6215.343 kb on + strand, within AO353_28520 at 6215.344 kb on - strand, within AO353_28520 at 6215.408 kb on - strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.447 kb on + strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.448 kb on - strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.521 kb on + strand at 6215.522 kb on - strand at 6215.522 kb on - strand at 6215.522 kb on - strand at 6215.522 kb on - strand at 6215.522 kb on - strand at 6215.522 kb on - strand at 6215.522 kb on - strand at 6215.523 kb on + strand at 6215.523 kb on + strand at 6215.523 kb on + strand at 6215.523 kb on + strand at 6215.523 kb on + strand at 6215.523 kb on + strand at 6215.523 kb on + strand at 6215.524 kb on - strand at 6215.524 kb on - strand at 6215.524 kb on - strand at 6215.524 kb on - strand at 6215.524 kb on - strand at 6215.524 kb on - strand at 6215.527 kb on + strand at 6215.527 kb on + strand at 6215.528 kb on - strand at 6215.528 kb on - strand at 6215.528 kb on - strand at 6215.528 kb on - strand at 6215.528 kb on - strand at 6215.537 kb on - strand at 6215.537 kb on - strand at 6215.545 kb on + strand at 6215.545 kb on + strand at 6215.545 kb on + strand at 6215.546 kb on - strand at 6215.546 kb on - strand at 6215.546 kb on - strand at 6215.546 kb on - strand at 6215.546 kb on - strand at 6215.546 kb on - strand at 6215.565 kb on + strand at 6215.565 kb on + strand at 6215.565 kb on + strand at 6215.565 kb on + strand at 6215.565 kb on + strand at 6215.565 kb on + strand at 6215.566 kb on - strand at 6215.566 kb on - strand at 6215.566 kb on - strand at 6215.800 kb on + strand, within AO353_28525 at 6215.800 kb on + strand, within AO353_28525 at 6215.800 kb on + strand, within AO353_28525 at 6215.800 kb on + strand, within AO353_28525 at 6215.800 kb on + strand, within AO353_28525 at 6215.800 kb on + strand, within AO353_28525 at 6215.800 kb on + strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.801 kb on - strand, within AO353_28525 at 6215.875 kb on + strand, within AO353_28525 at 6215.875 kb on + strand, within AO353_28525 at 6215.875 kb on + strand, within AO353_28525 at 6215.875 kb on + strand, within AO353_28525 at 6215.875 kb on + strand, within AO353_28525 at 6215.875 kb on + strand, within AO353_28525 at 6215.876 kb on - strand, within AO353_28525 at 6215.876 kb on - strand, within AO353_28525 at 6215.876 kb on - strand, within AO353_28525 at 6215.876 kb on - strand, within AO353_28525 at 6216.125 kb on + strand, within AO353_28525 at 6216.125 kb on + strand, within AO353_28525 at 6216.126 kb on - strand, within AO353_28525 at 6216.126 kb on - strand, within AO353_28525 at 6216.126 kb on - strand, within AO353_28525 at 6216.126 kb on - strand, within AO353_28525 at 6216.147 kb on + strand, within AO353_28525 at 6216.147 kb on + strand, within AO353_28525 at 6216.147 kb on + strand, within AO353_28525 at 6216.148 kb on - strand, within AO353_28525 at 6216.148 kb on - strand at 6216.308 kb on + strand, within AO353_28525 at 6216.309 kb on - strand, within AO353_28525 at 6216.355 kb on + strand, within AO353_28525 at 6216.356 kb on - strand, within AO353_28525 at 6216.382 kb on + strand, within AO353_28525 at 6216.382 kb on + strand, within AO353_28525 at 6216.382 kb on + strand, within AO353_28525 at 6216.382 kb on + strand, within AO353_28525 at 6216.383 kb on - strand, within AO353_28525
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 6,213,577 + AO353_28515 0.59 +1.2 6,213,986 + AO353_28515 0.84 +0.0 6,213,986 + AO353_28515 0.84 -0.2 6,213,987 - AO353_28515 0.84 +0.4 6,214,112 + -0.2 6,214,254 - +0.3 6,214,256 + -1.7 6,214,256 + -0.2 6,214,256 + +1.6 6,214,256 + -0.7 6,214,257 - +0.5 6,214,257 - +1.4 6,214,257 - -0.9 6,214,257 - +1.6 6,214,257 - -0.2 6,214,260 + +0.8 6,214,260 + -1.9 6,214,260 + +2.3 6,214,265 + +0.4 6,214,265 + +1.0 6,214,265 + -1.7 6,214,266 - -1.2 6,214,281 + +0.3 6,214,281 + -1.2 6,214,281 + +0.4 6,214,282 - -1.7 6,214,282 - +2.4 6,214,282 - -1.7 6,214,282 - +0.1 6,214,366 - -2.5 6,214,371 + -1.7 6,214,371 + +0.5 6,214,371 + -0.7 6,214,371 + +1.6 6,214,371 + +0.6 6,214,371 + +2.2 6,214,371 + -1.2 6,214,371 + +1.4 6,214,371 + +0.2 6,214,371 + +0.6 6,214,371 + +0.8 6,214,371 + +1.2 6,214,371 + +0.4 6,214,371 + -0.7 6,214,371 + +0.0 6,214,371 + -1.7 6,214,372 - -0.8 6,214,372 - +0.8 6,214,372 - -0.2 6,214,372 - -0.2 6,214,372 - -0.2 6,214,372 - -0.2 6,214,372 - -0.9 6,214,372 - -1.0 6,214,372 - -0.4 6,214,372 - -0.2 6,214,372 - +0.2 6,214,372 - +0.6 6,214,372 - -1.5 6,214,372 - +0.5 6,214,372 - +2.3 6,214,372 - +0.8 6,214,372 - +1.4 6,214,372 - +1.4 6,214,372 - -0.9 6,214,372 - -0.8 6,214,372 - -0.2 6,214,372 - -0.4 6,214,372 - -0.6 6,214,372 - -0.2 6,214,372 - +0.0 6,214,372 - +0.2 6,214,373 + +0.8 6,214,373 + -2.5 6,214,373 + -0.6 6,214,373 + -0.2 6,214,373 + +0.2 6,214,373 + -0.5 6,214,373 + +1.1 6,214,373 + -0.2 6,214,373 + -2.7 6,214,373 + +2.2 6,214,374 - +0.3 6,214,374 - -0.9 6,214,374 - -0.5 6,214,374 - +0.5 6,214,374 - +0.0 6,214,374 - -0.6 6,214,374 - -0.7 6,214,374 - +1.8 6,214,374 - -0.2 6,214,374 - +0.2 6,214,374 - +0.4 6,214,374 - +0.5 6,214,374 - -0.4 6,214,404 + +0.3 6,214,405 - -2.2 6,214,429 - +1.4 6,214,431 + -1.2 6,214,431 + -0.7 6,214,432 - -0.9 6,214,432 - +0.3 6,214,462 + +0.0 6,214,462 + +0.2 6,214,463 - +0.3 6,214,463 - +0.2 6,214,463 - +0.3 6,214,463 - -0.6 6,214,463 - +0.2 6,214,474 + -0.4 6,214,480 - -0.8 6,214,525 + -0.2 6,214,525 + -1.2 6,214,525 + -0.2 6,214,526 - +0.4 6,214,526 - +2.6 6,214,673 + AO353_28520 0.12 +0.8 6,214,673 + AO353_28520 0.12 -0.2 6,214,673 + AO353_28520 0.12 -1.6 6,214,674 - AO353_28520 0.12 -3.0 6,214,674 - AO353_28520 0.12 +0.5 6,214,734 + AO353_28520 0.19 +0.8 6,214,734 + AO353_28520 0.19 +0.8 6,214,882 - AO353_28520 0.36 +1.7 6,214,925 + AO353_28520 0.41 +0.5 6,214,926 - AO353_28520 0.41 -0.5 6,214,950 - AO353_28520 0.44 -1.2 6,214,974 - AO353_28520 0.46 -0.2 6,215,095 - AO353_28520 0.60 -1.1 6,215,095 - AO353_28520 0.60 +0.1 6,215,176 + AO353_28520 0.69 +2.6 6,215,177 - AO353_28520 0.70 +1.2 6,215,177 - AO353_28520 0.70 -0.2 6,215,180 - AO353_28520 0.70 +0.8 6,215,343 + AO353_28520 0.88 +1.6 6,215,343 + AO353_28520 0.88 +1.0 6,215,344 - AO353_28520 0.88 -0.6 6,215,408 - +2.8 6,215,447 + -1.2 6,215,447 + +0.8 6,215,447 + -1.2 6,215,447 + +0.8 6,215,447 + -0.5 6,215,447 + +1.1 6,215,447 + -0.7 6,215,447 + -0.2 6,215,447 + +0.8 6,215,447 + -0.4 6,215,447 + -0.2 6,215,447 + +0.8 6,215,448 - +0.2 6,215,448 - -0.5 6,215,448 - +1.1 6,215,448 - -0.2 6,215,448 - +1.3 6,215,448 - +0.6 6,215,448 - +0.2 6,215,448 - +1.4 6,215,448 - -0.6 6,215,448 - +1.0 6,215,448 - -0.2 6,215,448 - -0.0 6,215,448 - +0.6 6,215,448 - -0.6 6,215,448 - -0.2 6,215,448 - -1.2 6,215,448 - +0.4 6,215,448 - +1.1 6,215,521 + +0.9 6,215,521 + +0.6 6,215,521 + -0.2 6,215,521 + +0.8 6,215,521 + +1.6 6,215,521 + -0.9 6,215,521 + +1.4 6,215,521 + +0.5 6,215,521 + +0.8 6,215,522 - +0.3 6,215,522 - -0.6 6,215,522 - -2.5 6,215,522 - +0.3 6,215,522 - +1.6 6,215,522 - +0.4 6,215,522 - +1.4 6,215,523 + +0.1 6,215,523 + +0.2 6,215,523 + -1.2 6,215,523 + -0.2 6,215,523 + -2.3 6,215,523 + -0.2 6,215,523 + -0.2 6,215,524 - -1.7 6,215,524 - +2.6 6,215,524 - -0.4 6,215,524 - +0.2 6,215,524 - -1.9 6,215,524 - -0.4 6,215,527 + +1.0 6,215,527 + -0.6 6,215,528 - -0.2 6,215,528 - +0.2 6,215,528 - -1.5 6,215,528 - +0.7 6,215,528 - -0.8 6,215,537 - +0.1 6,215,537 - -0.6 6,215,545 + +1.8 6,215,545 + -1.2 6,215,545 + -0.6 6,215,546 - +0.8 6,215,546 - +0.2 6,215,546 - +0.6 6,215,546 - -0.9 6,215,546 - -0.8 6,215,546 - -0.7 6,215,565 + -1.7 6,215,565 + -1.7 6,215,565 + +2.3 6,215,565 + -0.5 6,215,565 + -1.2 6,215,565 + -3.2 6,215,566 - -2.0 6,215,566 - +0.5 6,215,566 - -1.5 6,215,800 + AO353_28525 0.24 +1.4 6,215,800 + AO353_28525 0.24 +0.5 6,215,800 + AO353_28525 0.24 -0.2 6,215,800 + AO353_28525 0.24 -0.6 6,215,800 + AO353_28525 0.24 -1.2 6,215,800 + AO353_28525 0.24 +0.3 6,215,800 + AO353_28525 0.24 -0.4 6,215,801 - AO353_28525 0.24 -0.2 6,215,801 - AO353_28525 0.24 -1.2 6,215,801 - AO353_28525 0.24 +2.2 6,215,801 - AO353_28525 0.24 -0.4 6,215,801 - AO353_28525 0.24 +0.6 6,215,801 - AO353_28525 0.24 -1.2 6,215,801 - AO353_28525 0.24 -1.4 6,215,801 - AO353_28525 0.24 -1.7 6,215,875 + AO353_28525 0.31 +0.4 6,215,875 + AO353_28525 0.31 +1.4 6,215,875 + AO353_28525 0.31 +0.3 6,215,875 + AO353_28525 0.31 +0.7 6,215,875 + AO353_28525 0.31 -0.2 6,215,875 + AO353_28525 0.31 -1.3 6,215,876 - AO353_28525 0.31 -0.4 6,215,876 - AO353_28525 0.31 +0.1 6,215,876 - AO353_28525 0.31 -0.4 6,215,876 - AO353_28525 0.31 -1.0 6,216,125 + AO353_28525 0.56 -0.7 6,216,125 + AO353_28525 0.56 +0.4 6,216,126 - AO353_28525 0.56 -0.2 6,216,126 - AO353_28525 0.56 +1.1 6,216,126 - AO353_28525 0.56 +0.3 6,216,126 - AO353_28525 0.56 +1.0 6,216,147 + AO353_28525 0.58 -0.0 6,216,147 + AO353_28525 0.58 +1.4 6,216,147 + AO353_28525 0.58 +0.8 6,216,148 - AO353_28525 0.58 +0.3 6,216,148 - +2.4 6,216,308 + AO353_28525 0.74 -0.7 6,216,309 - AO353_28525 0.74 -0.7 6,216,355 + AO353_28525 0.78 +0.8 6,216,356 - AO353_28525 0.78 -1.7 6,216,382 + AO353_28525 0.81 -0.4 6,216,382 + AO353_28525 0.81 -0.2 6,216,382 + AO353_28525 0.81 -0.2 6,216,382 + AO353_28525 0.81 -1.7 6,216,383 - AO353_28525 0.81 +0.4
Or see this region's nucleotide sequence