Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26420 and AO353_26425 overlap by 1 nucleotides AO353_26425 and AO353_26430 are separated by 81 nucleotides AO353_26430 and AO353_26435 are separated by 37 nucleotides AO353_26435 and AO353_26440 are separated by 171 nucleotides
AO353_26420: AO353_26420 - hypothetical protein, at 5,793,139 to 5,794,128
_26420
AO353_26425: AO353_26425 - exonuclease, at 5,794,128 to 5,794,790
_26425
AO353_26430: AO353_26430 - hypothetical protein, at 5,794,872 to 5,795,198
_26430
AO353_26435: AO353_26435 - hypothetical protein, at 5,795,236 to 5,795,817
_26435
AO353_26440: AO353_26440 - hypothetical protein, at 5,795,989 to 5,796,306
_26440
Position (kb) 5794
5795
5796 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5793.874 kb on - strand, within AO353_26420 at 5793.971 kb on - strand, within AO353_26420 at 5793.971 kb on - strand, within AO353_26420 at 5794.000 kb on - strand, within AO353_26420 at 5794.075 kb on - strand at 5794.126 kb on + strand at 5794.200 kb on - strand, within AO353_26425 at 5794.250 kb on + strand, within AO353_26425 at 5794.250 kb on + strand, within AO353_26425 at 5794.269 kb on + strand at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.336 kb on + strand, within AO353_26425 at 5794.377 kb on + strand, within AO353_26425 at 5794.434 kb on + strand, within AO353_26425 at 5794.435 kb on - strand, within AO353_26425 at 5794.435 kb on - strand, within AO353_26425 at 5794.516 kb on + strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.541 kb on + strand, within AO353_26425 at 5794.541 kb on + strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.650 kb on + strand, within AO353_26425 at 5794.650 kb on + strand, within AO353_26425 at 5794.680 kb on + strand, within AO353_26425 at 5794.680 kb on + strand, within AO353_26425 at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.926 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.015 kb on - strand, within AO353_26430 at 5795.063 kb on + strand, within AO353_26430 at 5795.064 kb on - strand, within AO353_26430 at 5795.073 kb on + strand, within AO353_26430 at 5795.074 kb on - strand at 5795.074 kb on - strand, within AO353_26430 at 5795.074 kb on - strand, within AO353_26430 at 5795.111 kb on + strand, within AO353_26430 at 5795.129 kb on + strand, within AO353_26430 at 5795.129 kb on + strand, within AO353_26430 at 5795.204 kb on + strand at 5795.204 kb on + strand at 5795.204 kb on + strand at 5795.205 kb on - strand at 5795.205 kb on - strand at 5795.205 kb on - strand at 5795.211 kb on + strand at 5795.224 kb on + strand at 5795.224 kb on + strand at 5795.224 kb on + strand at 5795.224 kb on + strand at 5795.225 kb on - strand at 5795.225 kb on - strand at 5795.225 kb on - strand at 5795.225 kb on - strand at 5795.237 kb on + strand at 5795.237 kb on + strand at 5795.238 kb on - strand at 5795.242 kb on - strand at 5795.279 kb on + strand at 5795.279 kb on + strand at 5795.279 kb on + strand at 5795.279 kb on + strand at 5795.280 kb on - strand at 5795.280 kb on - strand at 5795.281 kb on + strand at 5795.281 kb on + strand at 5795.281 kb on + strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.285 kb on + strand at 5795.285 kb on + strand at 5795.285 kb on + strand at 5795.285 kb on + strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.294 kb on + strand at 5795.295 kb on - strand, within AO353_26435 at 5795.297 kb on + strand, within AO353_26435 at 5795.298 kb on - strand, within AO353_26435 at 5795.298 kb on - strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.334 kb on - strand, within AO353_26435 at 5795.359 kb on + strand, within AO353_26435 at 5795.359 kb on + strand, within AO353_26435 at 5795.360 kb on - strand, within AO353_26435 at 5795.365 kb on - strand, within AO353_26435 at 5795.400 kb on + strand, within AO353_26435 at 5795.400 kb on + strand, within AO353_26435 at 5795.400 kb on + strand, within AO353_26435 at 5795.401 kb on - strand, within AO353_26435 at 5795.410 kb on - strand, within AO353_26435 at 5795.434 kb on - strand, within AO353_26435 at 5795.469 kb on + strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.514 kb on + strand, within AO353_26435 at 5795.514 kb on + strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.563 kb on + strand, within AO353_26435 at 5795.564 kb on - strand, within AO353_26435 at 5795.582 kb on - strand, within AO353_26435 at 5795.582 kb on - strand at 5795.582 kb on - strand, within AO353_26435 at 5795.588 kb on - strand, within AO353_26435 at 5795.632 kb on + strand at 5795.632 kb on + strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.635 kb on + strand, within AO353_26435 at 5795.636 kb on - strand, within AO353_26435 at 5795.648 kb on - strand, within AO353_26435 at 5795.738 kb on - strand, within AO353_26435 at 5795.764 kb on - strand at 5795.860 kb on + strand at 5795.902 kb on + strand at 5795.902 kb on + strand at 5795.902 kb on + strand at 5795.940 kb on + strand at 5795.940 kb on + strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.998 kb on + strand at 5795.998 kb on + strand at 5795.999 kb on - strand at 5795.999 kb on - strand at 5796.128 kb on - strand, within AO353_26440 at 5796.139 kb on + strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.150 kb on + strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.154 kb on + strand, within AO353_26440
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 5,793,874 - AO353_26420 0.74 +2.9 5,793,971 - AO353_26420 0.84 +0.4 5,793,971 - AO353_26420 0.84 +0.3 5,794,000 - AO353_26420 0.87 +0.1 5,794,075 - +0.8 5,794,126 + +0.8 5,794,200 - AO353_26425 0.11 +1.1 5,794,250 + AO353_26425 0.18 -0.1 5,794,250 + AO353_26425 0.18 -0.6 5,794,269 + -0.2 5,794,269 + AO353_26425 0.21 -0.2 5,794,269 + AO353_26425 0.21 -1.2 5,794,269 + AO353_26425 0.21 -0.4 5,794,269 + AO353_26425 0.21 +2.3 5,794,269 + AO353_26425 0.21 -0.7 5,794,269 + AO353_26425 0.21 +1.8 5,794,269 + AO353_26425 0.21 -0.5 5,794,269 + AO353_26425 0.21 -0.5 5,794,269 + AO353_26425 0.21 -0.4 5,794,269 + AO353_26425 0.21 +0.8 5,794,269 + AO353_26425 0.21 +1.1 5,794,269 + AO353_26425 0.21 -0.7 5,794,269 + AO353_26425 0.21 -0.2 5,794,270 - AO353_26425 0.21 -0.1 5,794,270 - AO353_26425 0.21 -1.1 5,794,270 - AO353_26425 0.21 -0.2 5,794,270 - AO353_26425 0.21 +0.6 5,794,270 - AO353_26425 0.21 +0.5 5,794,336 + AO353_26425 0.31 +1.0 5,794,377 + AO353_26425 0.38 -0.2 5,794,434 + AO353_26425 0.46 -1.6 5,794,435 - AO353_26425 0.46 -0.5 5,794,435 - AO353_26425 0.46 -0.1 5,794,516 + AO353_26425 0.59 +0.2 5,794,517 - AO353_26425 0.59 -1.8 5,794,517 - AO353_26425 0.59 +1.2 5,794,517 - AO353_26425 0.59 +0.8 5,794,517 - AO353_26425 0.59 -0.4 5,794,517 - AO353_26425 0.59 -0.2 5,794,541 + AO353_26425 0.62 +0.1 5,794,541 + AO353_26425 0.62 +1.3 5,794,542 - AO353_26425 0.62 +0.8 5,794,542 - AO353_26425 0.62 -0.6 5,794,542 - AO353_26425 0.62 -3.4 5,794,542 - AO353_26425 0.62 -0.2 5,794,650 + AO353_26425 0.79 +0.3 5,794,650 + AO353_26425 0.79 -0.5 5,794,680 + AO353_26425 0.83 -1.0 5,794,680 + AO353_26425 0.83 -0.8 5,794,857 + -1.1 5,794,857 + +1.8 5,794,857 + -0.8 5,794,857 + +1.9 5,794,857 + -1.8 5,794,857 + -0.7 5,794,857 + +0.2 5,794,857 + -0.8 5,794,857 + +0.9 5,794,858 - -1.6 5,794,858 - -1.8 5,794,858 - +0.5 5,794,858 - +1.3 5,794,858 - +0.3 5,794,858 - -1.2 5,794,858 - +0.9 5,794,926 + AO353_26430 0.17 -1.2 5,795,014 + AO353_26430 0.43 -0.2 5,795,014 + AO353_26430 0.43 +0.8 5,795,014 + AO353_26430 0.43 -1.2 5,795,014 + AO353_26430 0.43 -0.2 5,795,014 + AO353_26430 0.43 +0.6 5,795,015 - AO353_26430 0.44 -2.2 5,795,063 + AO353_26430 0.58 -1.7 5,795,064 - AO353_26430 0.59 -0.2 5,795,073 + AO353_26430 0.61 -1.8 5,795,074 - +0.8 5,795,074 - AO353_26430 0.62 -1.4 5,795,074 - AO353_26430 0.62 +1.1 5,795,111 + AO353_26430 0.73 -1.8 5,795,129 + AO353_26430 0.79 -0.2 5,795,129 + AO353_26430 0.79 -0.7 5,795,204 + -1.5 5,795,204 + +0.3 5,795,204 + -0.8 5,795,205 - -0.4 5,795,205 - -1.4 5,795,205 - +1.5 5,795,211 + +0.1 5,795,224 + +0.5 5,795,224 + +2.1 5,795,224 + +0.8 5,795,224 + -0.7 5,795,225 - +2.8 5,795,225 - +1.1 5,795,225 - -0.2 5,795,225 - +0.5 5,795,237 + +1.3 5,795,237 + -1.8 5,795,238 - -0.8 5,795,242 - +0.8 5,795,279 + -2.4 5,795,279 + -0.7 5,795,279 + -1.8 5,795,279 + -2.2 5,795,280 - +1.2 5,795,280 - +0.0 5,795,281 + -0.7 5,795,281 + -0.7 5,795,281 + +1.8 5,795,282 - -1.0 5,795,282 - -1.7 5,795,282 - +0.2 5,795,282 - -0.8 5,795,282 - +0.5 5,795,282 - -0.6 5,795,285 + -0.2 5,795,285 + +0.5 5,795,285 + +0.0 5,795,285 + -0.4 5,795,286 - -0.5 5,795,286 - +0.2 5,795,286 - -0.2 5,795,286 - +2.1 5,795,286 - -0.0 5,795,294 + -1.1 5,795,295 - AO353_26435 0.10 -0.1 5,795,297 + AO353_26435 0.10 -1.8 5,795,298 - AO353_26435 0.11 +1.1 5,795,298 - AO353_26435 0.11 -1.7 5,795,333 + AO353_26435 0.17 -0.8 5,795,333 + AO353_26435 0.17 +0.3 5,795,333 + AO353_26435 0.17 -0.2 5,795,333 + AO353_26435 0.17 -1.6 5,795,334 - AO353_26435 0.17 -0.2 5,795,359 + AO353_26435 0.21 +0.2 5,795,359 + AO353_26435 0.21 -2.6 5,795,360 - AO353_26435 0.21 -0.1 5,795,365 - AO353_26435 0.22 +0.8 5,795,400 + AO353_26435 0.28 -1.2 5,795,400 + AO353_26435 0.28 -1.6 5,795,400 + AO353_26435 0.28 -0.9 5,795,401 - AO353_26435 0.28 -0.7 5,795,410 - AO353_26435 0.30 -1.2 5,795,434 - AO353_26435 0.34 -0.7 5,795,469 + AO353_26435 0.40 -0.2 5,795,470 - AO353_26435 0.40 -0.2 5,795,470 - AO353_26435 0.40 +0.0 5,795,470 - AO353_26435 0.40 +0.4 5,795,470 - AO353_26435 0.40 +0.9 5,795,514 + AO353_26435 0.48 -0.7 5,795,514 + AO353_26435 0.48 +1.0 5,795,515 - AO353_26435 0.48 +0.4 5,795,515 - AO353_26435 0.48 -0.6 5,795,515 - AO353_26435 0.48 +0.8 5,795,515 - AO353_26435 0.48 -1.2 5,795,563 + AO353_26435 0.56 -0.1 5,795,564 - AO353_26435 0.56 -1.8 5,795,582 - AO353_26435 0.59 -0.6 5,795,582 - -0.2 5,795,582 - AO353_26435 0.59 -0.2 5,795,588 - AO353_26435 0.60 -0.0 5,795,632 + -2.2 5,795,632 + AO353_26435 0.68 -1.1 5,795,633 - AO353_26435 0.68 -0.2 5,795,633 - AO353_26435 0.68 +2.3 5,795,633 - AO353_26435 0.68 +0.2 5,795,633 - AO353_26435 0.68 -1.6 5,795,633 - AO353_26435 0.68 -3.1 5,795,633 - AO353_26435 0.68 +0.8 5,795,635 + AO353_26435 0.69 +0.3 5,795,636 - AO353_26435 0.69 +1.8 5,795,648 - AO353_26435 0.71 -1.2 5,795,738 - AO353_26435 0.86 +1.4 5,795,764 - +0.5 5,795,860 + +0.2 5,795,902 + +1.6 5,795,902 + +0.8 5,795,902 + -1.1 5,795,940 + -1.5 5,795,940 + -0.2 5,795,941 - -2.0 5,795,941 - -2.1 5,795,941 - -0.8 5,795,941 - -0.6 5,795,998 + +0.3 5,795,998 + -2.8 5,795,999 - +0.0 5,795,999 - -1.8 5,796,128 - AO353_26440 0.44 +0.8 5,796,139 + AO353_26440 0.47 -1.2 5,796,140 - AO353_26440 0.47 +0.9 5,796,140 - AO353_26440 0.47 +0.1 5,796,140 - AO353_26440 0.47 +0.5 5,796,150 + AO353_26440 0.51 -0.7 5,796,151 - AO353_26440 0.51 -0.5 5,796,151 - AO353_26440 0.51 -2.0 5,796,151 - AO353_26440 0.51 +1.3 5,796,154 + AO353_26440 0.52 +1.3
Or see this region's nucleotide sequence