Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25960 and AO353_25965 are separated by 246 nucleotides AO353_25965 and AO353_25970 are separated by 11 nucleotides
AO353_25960: AO353_25960 - threonine dehydratase, at 5,721,623 to 5,722,630
_25960
AO353_25965: AO353_25965 - hypothetical protein, at 5,722,877 to 5,723,212
_25965
AO353_25970: AO353_25970 - asparaginase, at 5,723,224 to 5,724,264
_25970
Position (kb)
5722
5723
5724 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5721.896 kb on + strand, within AO353_25960 at 5722.017 kb on + strand, within AO353_25960 at 5722.017 kb on + strand, within AO353_25960 at 5722.017 kb on + strand, within AO353_25960 at 5722.018 kb on - strand, within AO353_25960 at 5722.026 kb on + strand, within AO353_25960 at 5722.026 kb on + strand, within AO353_25960 at 5722.203 kb on + strand, within AO353_25960 at 5722.203 kb on + strand, within AO353_25960 at 5722.204 kb on - strand, within AO353_25960 at 5722.204 kb on - strand, within AO353_25960 at 5722.204 kb on - strand, within AO353_25960 at 5722.425 kb on + strand, within AO353_25960 at 5722.425 kb on + strand, within AO353_25960 at 5722.426 kb on - strand, within AO353_25960 at 5722.549 kb on - strand at 5722.549 kb on - strand at 5722.549 kb on - strand at 5722.578 kb on + strand at 5722.579 kb on - strand at 5722.726 kb on - strand at 5722.741 kb on + strand at 5722.741 kb on + strand at 5722.742 kb on - strand at 5722.742 kb on - strand at 5722.789 kb on - strand at 5722.789 kb on - strand at 5722.925 kb on + strand, within AO353_25965 at 5722.928 kb on - strand, within AO353_25965 at 5723.000 kb on - strand, within AO353_25965 at 5723.025 kb on - strand at 5723.057 kb on + strand, within AO353_25965 at 5723.057 kb on + strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.124 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.151 kb on - strand, within AO353_25965 at 5723.151 kb on - strand, within AO353_25965 at 5723.226 kb on - strand at 5723.226 kb on - strand at 5723.269 kb on + strand at 5723.269 kb on + strand at 5723.269 kb on + strand at 5723.269 kb on + strand at 5723.270 kb on - strand at 5723.270 kb on - strand at 5723.368 kb on + strand, within AO353_25970 at 5723.368 kb on + strand, within AO353_25970 at 5723.369 kb on - strand, within AO353_25970 at 5723.375 kb on + strand, within AO353_25970 at 5723.375 kb on + strand, within AO353_25970 at 5723.376 kb on - strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.448 kb on + strand, within AO353_25970 at 5723.459 kb on + strand, within AO353_25970 at 5723.459 kb on + strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.520 kb on + strand, within AO353_25970 at 5723.521 kb on - strand, within AO353_25970 at 5723.521 kb on - strand at 5723.555 kb on + strand at 5723.555 kb on + strand, within AO353_25970 at 5723.555 kb on + strand, within AO353_25970 at 5723.555 kb on + strand, within AO353_25970 at 5723.556 kb on - strand, within AO353_25970 at 5723.556 kb on - strand, within AO353_25970 at 5723.638 kb on + strand, within AO353_25970 at 5723.639 kb on - strand, within AO353_25970 at 5723.639 kb on - strand, within AO353_25970 at 5723.795 kb on + strand, within AO353_25970 at 5723.850 kb on + strand, within AO353_25970 at 5723.850 kb on + strand at 5724.001 kb on - strand, within AO353_25970 at 5724.018 kb on + strand, within AO353_25970 at 5724.019 kb on - strand, within AO353_25970 at 5724.019 kb on - strand, within AO353_25970 at 5724.019 kb on - strand, within AO353_25970
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 5,721,896 + AO353_25960 0.27 +0.1 5,722,017 + AO353_25960 0.39 +0.5 5,722,017 + AO353_25960 0.39 +0.8 5,722,017 + AO353_25960 0.39 -0.2 5,722,018 - AO353_25960 0.39 -0.6 5,722,026 + AO353_25960 0.40 +0.6 5,722,026 + AO353_25960 0.40 +0.4 5,722,203 + AO353_25960 0.58 +0.8 5,722,203 + AO353_25960 0.58 -0.5 5,722,204 - AO353_25960 0.58 -0.5 5,722,204 - AO353_25960 0.58 +0.2 5,722,204 - AO353_25960 0.58 -2.2 5,722,425 + AO353_25960 0.80 +0.6 5,722,425 + AO353_25960 0.80 +1.8 5,722,426 - AO353_25960 0.80 -0.8 5,722,549 - -0.2 5,722,549 - +0.8 5,722,549 - +0.3 5,722,578 + +2.1 5,722,579 - +1.3 5,722,726 - +0.6 5,722,741 + -0.7 5,722,741 + +2.1 5,722,742 - -0.2 5,722,742 - +0.5 5,722,789 - +1.0 5,722,789 - +0.3 5,722,925 + AO353_25965 0.14 -0.7 5,722,928 - AO353_25965 0.15 +0.2 5,723,000 - AO353_25965 0.37 -1.2 5,723,025 - +1.8 5,723,057 + AO353_25965 0.54 +0.8 5,723,057 + AO353_25965 0.54 -0.2 5,723,058 - AO353_25965 0.54 +1.3 5,723,058 - AO353_25965 0.54 +0.1 5,723,058 - AO353_25965 0.54 -0.4 5,723,058 - AO353_25965 0.54 -0.2 5,723,124 + AO353_25965 0.74 +2.2 5,723,150 + AO353_25965 0.81 +0.6 5,723,150 + AO353_25965 0.81 +0.2 5,723,150 + AO353_25965 0.81 +2.3 5,723,150 + AO353_25965 0.81 +1.2 5,723,150 + AO353_25965 0.81 +1.1 5,723,151 - AO353_25965 0.82 -0.2 5,723,151 - AO353_25965 0.82 +1.1 5,723,226 - +0.6 5,723,226 - -0.2 5,723,269 + -0.5 5,723,269 + +0.3 5,723,269 + +0.1 5,723,269 + +0.5 5,723,270 - -2.6 5,723,270 - -0.8 5,723,368 + AO353_25970 0.14 -1.8 5,723,368 + AO353_25970 0.14 -2.8 5,723,369 - AO353_25970 0.14 +1.3 5,723,375 + AO353_25970 0.15 -0.8 5,723,375 + AO353_25970 0.15 +0.0 5,723,376 - AO353_25970 0.15 -1.1 5,723,446 + AO353_25970 0.21 +0.8 5,723,446 + AO353_25970 0.21 +0.8 5,723,446 + AO353_25970 0.21 -1.1 5,723,446 + AO353_25970 0.21 +0.3 5,723,448 + AO353_25970 0.22 -0.5 5,723,459 + AO353_25970 0.23 -1.4 5,723,459 + AO353_25970 0.23 +1.1 5,723,460 - AO353_25970 0.23 -1.1 5,723,460 - AO353_25970 0.23 +0.2 5,723,460 - AO353_25970 0.23 +0.2 5,723,460 - AO353_25970 0.23 -0.2 5,723,460 - AO353_25970 0.23 +0.6 5,723,520 + AO353_25970 0.28 -2.2 5,723,521 - AO353_25970 0.29 +0.4 5,723,521 - +0.3 5,723,555 + -0.2 5,723,555 + AO353_25970 0.32 -1.8 5,723,555 + AO353_25970 0.32 -1.2 5,723,555 + AO353_25970 0.32 +0.2 5,723,556 - AO353_25970 0.32 +0.5 5,723,556 - AO353_25970 0.32 +1.9 5,723,638 + AO353_25970 0.40 -1.1 5,723,639 - AO353_25970 0.40 +0.2 5,723,639 - AO353_25970 0.40 +1.0 5,723,795 + AO353_25970 0.55 +0.5 5,723,850 + AO353_25970 0.60 -1.6 5,723,850 + -0.2 5,724,001 - AO353_25970 0.75 +0.4 5,724,018 + AO353_25970 0.76 +0.1 5,724,019 - AO353_25970 0.76 -0.2 5,724,019 - AO353_25970 0.76 +0.5 5,724,019 - AO353_25970 0.76 +1.8
Or see this region's nucleotide sequence