Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24775 and AO353_24780 are separated by 80 nucleotides AO353_24780 and AO353_24785 are separated by 173 nucleotides
AO353_24775: AO353_24775 - ABC transporter substrate-binding protein, at 5,460,988 to 5,462,076
_24775
AO353_24780: AO353_24780 - glutamine synthetase, at 5,462,157 to 5,463,515
_24780
AO353_24785: AO353_24785 - AraC family transcriptional regulator, at 5,463,689 to 5,464,621
_24785
Position (kb) 5462
5463
5464 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5461.208 kb on + strand, within AO353_24775 at 5461.208 kb on + strand, within AO353_24775 at 5461.208 kb on + strand, within AO353_24775 at 5461.208 kb on + strand, within AO353_24775 at 5461.209 kb on - strand, within AO353_24775 at 5461.209 kb on - strand, within AO353_24775 at 5461.209 kb on - strand, within AO353_24775 at 5461.209 kb on - strand, within AO353_24775 at 5461.209 kb on - strand, within AO353_24775 at 5461.209 kb on - strand, within AO353_24775 at 5461.209 kb on - strand, within AO353_24775 at 5461.433 kb on + strand, within AO353_24775 at 5461.434 kb on - strand at 5461.442 kb on + strand, within AO353_24775 at 5461.442 kb on + strand, within AO353_24775 at 5461.443 kb on - strand, within AO353_24775 at 5461.443 kb on - strand, within AO353_24775 at 5461.443 kb on - strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand, within AO353_24775 at 5461.520 kb on + strand at 5461.520 kb on + strand, within AO353_24775 at 5461.521 kb on - strand, within AO353_24775 at 5461.521 kb on - strand, within AO353_24775 at 5461.540 kb on + strand, within AO353_24775 at 5461.697 kb on + strand, within AO353_24775 at 5461.697 kb on + strand, within AO353_24775 at 5461.697 kb on + strand, within AO353_24775 at 5461.697 kb on + strand, within AO353_24775 at 5461.753 kb on - strand, within AO353_24775 at 5461.912 kb on + strand, within AO353_24775 at 5461.913 kb on - strand, within AO353_24775 at 5461.913 kb on - strand, within AO353_24775 at 5461.919 kb on + strand, within AO353_24775 at 5461.919 kb on + strand, within AO353_24775 at 5461.919 kb on + strand, within AO353_24775 at 5461.920 kb on - strand, within AO353_24775 at 5461.974 kb on + strand at 5461.974 kb on + strand at 5461.974 kb on + strand at 5461.975 kb on - strand at 5461.976 kb on + strand at 5461.976 kb on + strand at 5461.976 kb on + strand at 5461.976 kb on + strand at 5461.976 kb on + strand at 5461.977 kb on - strand at 5461.977 kb on - strand at 5461.977 kb on - strand at 5461.977 kb on - strand at 5461.977 kb on - strand at 5461.991 kb on + strand at 5461.991 kb on + strand at 5461.992 kb on - strand at 5461.992 kb on - strand at 5462.068 kb on + strand at 5462.068 kb on + strand at 5462.069 kb on - strand at 5462.269 kb on + strand at 5462.350 kb on + strand, within AO353_24780 at 5462.438 kb on - strand, within AO353_24780 at 5462.627 kb on - strand, within AO353_24780 at 5462.792 kb on + strand, within AO353_24780 at 5462.793 kb on - strand, within AO353_24780 at 5463.085 kb on + strand, within AO353_24780 at 5463.085 kb on + strand, within AO353_24780 at 5463.085 kb on + strand, within AO353_24780 at 5463.085 kb on + strand, within AO353_24780 at 5463.086 kb on - strand, within AO353_24780 at 5463.134 kb on - strand at 5463.134 kb on - strand, within AO353_24780 at 5463.250 kb on + strand, within AO353_24780 at 5463.250 kb on + strand, within AO353_24780 at 5463.250 kb on + strand, within AO353_24780 at 5463.250 kb on + strand, within AO353_24780 at 5463.251 kb on - strand, within AO353_24780 at 5463.310 kb on + strand, within AO353_24780 at 5463.310 kb on + strand, within AO353_24780 at 5463.311 kb on - strand, within AO353_24780 at 5463.313 kb on + strand, within AO353_24780 at 5463.313 kb on + strand, within AO353_24780 at 5463.313 kb on + strand, within AO353_24780 at 5463.314 kb on - strand, within AO353_24780 at 5463.314 kb on - strand, within AO353_24780 at 5463.314 kb on - strand, within AO353_24780 at 5463.412 kb on - strand at 5463.515 kb on + strand at 5463.515 kb on + strand at 5463.515 kb on + strand at 5463.516 kb on - strand at 5463.536 kb on + strand at 5463.536 kb on + strand at 5463.536 kb on + strand at 5463.567 kb on + strand at 5463.567 kb on + strand at 5463.567 kb on + strand at 5463.568 kb on - strand at 5463.568 kb on - strand at 5463.607 kb on + strand at 5463.635 kb on + strand at 5463.635 kb on + strand at 5463.635 kb on + strand at 5463.636 kb on - strand at 5463.636 kb on - strand at 5463.644 kb on + strand at 5463.644 kb on + strand at 5463.779 kb on + strand at 5463.941 kb on + strand, within AO353_24785 at 5463.941 kb on + strand, within AO353_24785 at 5463.941 kb on + strand, within AO353_24785 at 5463.941 kb on + strand, within AO353_24785 at 5463.941 kb on + strand, within AO353_24785 at 5463.942 kb on - strand, within AO353_24785 at 5463.942 kb on - strand, within AO353_24785 at 5463.942 kb on - strand, within AO353_24785 at 5463.942 kb on - strand, within AO353_24785 at 5463.942 kb on - strand, within AO353_24785 at 5463.942 kb on - strand, within AO353_24785 at 5463.989 kb on + strand, within AO353_24785 at 5463.989 kb on + strand, within AO353_24785 at 5463.989 kb on + strand, within AO353_24785 at 5463.989 kb on + strand, within AO353_24785 at 5463.990 kb on - strand, within AO353_24785 at 5464.048 kb on - strand, within AO353_24785 at 5464.048 kb on - strand, within AO353_24785 at 5464.048 kb on - strand, within AO353_24785 at 5464.205 kb on - strand, within AO353_24785 at 5464.388 kb on + strand, within AO353_24785 at 5464.388 kb on + strand, within AO353_24785 at 5464.388 kb on + strand, within AO353_24785 at 5464.388 kb on + strand, within AO353_24785 at 5464.389 kb on - strand, within AO353_24785 at 5464.389 kb on - strand, within AO353_24785 at 5464.389 kb on - strand, within AO353_24785
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 5,461,208 + AO353_24775 0.20 +0.1 5,461,208 + AO353_24775 0.20 +0.6 5,461,208 + AO353_24775 0.20 -2.6 5,461,208 + AO353_24775 0.20 -1.2 5,461,209 - AO353_24775 0.20 -0.9 5,461,209 - AO353_24775 0.20 -1.9 5,461,209 - AO353_24775 0.20 +0.3 5,461,209 - AO353_24775 0.20 -0.7 5,461,209 - AO353_24775 0.20 -0.7 5,461,209 - AO353_24775 0.20 +1.1 5,461,209 - AO353_24775 0.20 -0.8 5,461,433 + AO353_24775 0.41 -0.8 5,461,434 - -0.7 5,461,442 + AO353_24775 0.42 -0.2 5,461,442 + AO353_24775 0.42 -1.2 5,461,443 - AO353_24775 0.42 -2.8 5,461,443 - AO353_24775 0.42 -2.2 5,461,443 - AO353_24775 0.42 +0.3 5,461,520 + AO353_24775 0.49 +0.8 5,461,520 + AO353_24775 0.49 -0.2 5,461,520 + AO353_24775 0.49 -0.7 5,461,520 + AO353_24775 0.49 +0.8 5,461,520 + AO353_24775 0.49 -0.8 5,461,520 + AO353_24775 0.49 -0.8 5,461,520 + AO353_24775 0.49 -0.1 5,461,520 + AO353_24775 0.49 -0.9 5,461,520 + AO353_24775 0.49 +1.3 5,461,520 + -2.1 5,461,520 + AO353_24775 0.49 +0.8 5,461,521 - AO353_24775 0.49 +0.9 5,461,521 - AO353_24775 0.49 -0.2 5,461,540 + AO353_24775 0.51 +2.3 5,461,697 + AO353_24775 0.65 -0.0 5,461,697 + AO353_24775 0.65 +1.1 5,461,697 + AO353_24775 0.65 -0.2 5,461,697 + AO353_24775 0.65 -0.6 5,461,753 - AO353_24775 0.70 -0.1 5,461,912 + AO353_24775 0.85 -0.5 5,461,913 - AO353_24775 0.85 +1.3 5,461,913 - AO353_24775 0.85 -1.5 5,461,919 + AO353_24775 0.85 +1.0 5,461,919 + AO353_24775 0.85 +0.8 5,461,919 + AO353_24775 0.85 -2.2 5,461,920 - AO353_24775 0.86 +1.9 5,461,974 + -0.7 5,461,974 + -0.7 5,461,974 + +1.3 5,461,975 - -0.8 5,461,976 + +0.1 5,461,976 + -0.1 5,461,976 + +0.8 5,461,976 + -0.2 5,461,976 + +0.8 5,461,977 - -0.5 5,461,977 - -0.2 5,461,977 - +2.3 5,461,977 - -0.5 5,461,977 - -0.7 5,461,991 + +0.9 5,461,991 + -0.7 5,461,992 - +0.2 5,461,992 - -0.4 5,462,068 + -0.2 5,462,068 + -2.0 5,462,069 - -1.8 5,462,269 + -1.0 5,462,350 + AO353_24780 0.14 +0.2 5,462,438 - AO353_24780 0.21 +0.8 5,462,627 - AO353_24780 0.35 +0.8 5,462,792 + AO353_24780 0.47 -0.4 5,462,793 - AO353_24780 0.47 +1.6 5,463,085 + AO353_24780 0.68 -2.2 5,463,085 + AO353_24780 0.68 -0.7 5,463,085 + AO353_24780 0.68 +0.9 5,463,085 + AO353_24780 0.68 +1.1 5,463,086 - AO353_24780 0.68 -1.2 5,463,134 - -2.2 5,463,134 - AO353_24780 0.72 +0.0 5,463,250 + AO353_24780 0.80 +0.8 5,463,250 + AO353_24780 0.80 +1.5 5,463,250 + AO353_24780 0.80 -1.8 5,463,250 + AO353_24780 0.80 -0.8 5,463,251 - AO353_24780 0.81 +0.5 5,463,310 + AO353_24780 0.85 +0.5 5,463,310 + AO353_24780 0.85 +0.1 5,463,311 - AO353_24780 0.85 -1.0 5,463,313 + AO353_24780 0.85 +0.8 5,463,313 + AO353_24780 0.85 +1.8 5,463,313 + AO353_24780 0.85 -0.2 5,463,314 - AO353_24780 0.85 +0.6 5,463,314 - AO353_24780 0.85 +0.8 5,463,314 - AO353_24780 0.85 +0.3 5,463,412 - -0.8 5,463,515 + +1.0 5,463,515 + -0.3 5,463,515 + -1.3 5,463,516 - +0.7 5,463,536 + +0.7 5,463,536 + -0.3 5,463,536 + -2.8 5,463,567 + -0.3 5,463,567 + +1.6 5,463,567 + +0.0 5,463,568 - -1.3 5,463,568 - -0.3 5,463,607 + +0.9 5,463,635 + -0.8 5,463,635 + +1.7 5,463,635 + -0.1 5,463,636 - -1.0 5,463,636 - -0.5 5,463,644 + -0.3 5,463,644 + +0.1 5,463,779 + -0.4 5,463,941 + AO353_24785 0.27 -0.4 5,463,941 + AO353_24785 0.27 +0.7 5,463,941 + AO353_24785 0.27 +0.7 5,463,941 + AO353_24785 0.27 -0.3 5,463,941 + AO353_24785 0.27 +0.0 5,463,942 - AO353_24785 0.27 -2.3 5,463,942 - AO353_24785 0.27 -0.5 5,463,942 - AO353_24785 0.27 -0.1 5,463,942 - AO353_24785 0.27 -0.6 5,463,942 - AO353_24785 0.27 +0.4 5,463,942 - AO353_24785 0.27 +0.4 5,463,989 + AO353_24785 0.32 +0.5 5,463,989 + AO353_24785 0.32 +0.2 5,463,989 + AO353_24785 0.32 -1.3 5,463,989 + AO353_24785 0.32 +0.8 5,463,990 - AO353_24785 0.32 -0.8 5,464,048 - AO353_24785 0.38 -0.7 5,464,048 - AO353_24785 0.38 -0.5 5,464,048 - AO353_24785 0.38 +1.7 5,464,205 - AO353_24785 0.55 -1.8 5,464,388 + AO353_24785 0.75 +0.3 5,464,388 + AO353_24785 0.75 -0.8 5,464,388 + AO353_24785 0.75 -3.4 5,464,388 + AO353_24785 0.75 -0.3 5,464,389 - AO353_24785 0.75 +0.1 5,464,389 - AO353_24785 0.75 +0.7 5,464,389 - AO353_24785 0.75 +2.1
Or see this region's nucleotide sequence