Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24075 and AO353_24080 are separated by 219 nucleotides AO353_24080 and AO353_24085 overlap by 4 nucleotides
AO353_24075: AO353_24075 - RND transporter, at 5,296,608 to 5,298,068
_24075
AO353_24080: AO353_24080 - hypothetical protein, at 5,298,288 to 5,299,397
_24080
AO353_24085: AO353_24085 - multidrug transporter, at 5,299,394 to 5,302,531
_24085
Position (kb)
5298
5299
5300 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5297.392 kb on + strand, within AO353_24075 at 5297.392 kb on + strand, within AO353_24075 at 5297.392 kb on + strand, within AO353_24075 at 5297.392 kb on + strand, within AO353_24075 at 5297.416 kb on + strand, within AO353_24075 at 5297.417 kb on - strand, within AO353_24075 at 5297.436 kb on + strand, within AO353_24075 at 5297.457 kb on - strand, within AO353_24075 at 5297.457 kb on - strand, within AO353_24075 at 5297.509 kb on + strand, within AO353_24075 at 5297.509 kb on + strand, within AO353_24075 at 5297.509 kb on + strand, within AO353_24075 at 5297.509 kb on + strand, within AO353_24075 at 5297.509 kb on + strand, within AO353_24075 at 5297.509 kb on + strand, within AO353_24075 at 5297.510 kb on - strand, within AO353_24075 at 5297.510 kb on - strand, within AO353_24075 at 5297.510 kb on - strand, within AO353_24075 at 5297.510 kb on - strand, within AO353_24075 at 5297.510 kb on - strand, within AO353_24075 at 5297.625 kb on + strand, within AO353_24075 at 5297.625 kb on + strand, within AO353_24075 at 5297.625 kb on + strand, within AO353_24075 at 5297.625 kb on + strand, within AO353_24075 at 5297.625 kb on + strand, within AO353_24075 at 5297.626 kb on - strand, within AO353_24075 at 5297.626 kb on - strand, within AO353_24075 at 5297.657 kb on - strand, within AO353_24075 at 5297.729 kb on - strand, within AO353_24075 at 5297.729 kb on - strand, within AO353_24075 at 5297.769 kb on + strand, within AO353_24075 at 5297.769 kb on + strand, within AO353_24075 at 5297.769 kb on + strand, within AO353_24075 at 5297.770 kb on - strand, within AO353_24075 at 5297.770 kb on - strand, within AO353_24075 at 5297.962 kb on + strand at 5297.963 kb on - strand at 5297.963 kb on - strand at 5298.074 kb on + strand at 5298.145 kb on + strand at 5298.145 kb on + strand at 5298.145 kb on + strand at 5298.146 kb on - strand at 5298.146 kb on - strand at 5298.146 kb on - strand at 5298.166 kb on - strand at 5298.166 kb on - strand at 5298.166 kb on - strand at 5298.187 kb on + strand at 5298.188 kb on - strand at 5298.188 kb on - strand at 5298.188 kb on - strand at 5298.188 kb on - strand at 5298.273 kb on + strand at 5298.277 kb on + strand at 5298.277 kb on + strand at 5298.277 kb on + strand at 5298.278 kb on - strand at 5298.278 kb on - strand at 5298.287 kb on + strand at 5298.288 kb on - strand at 5298.288 kb on - strand at 5298.455 kb on - strand, within AO353_24080 at 5298.455 kb on - strand, within AO353_24080 at 5298.455 kb on - strand, within AO353_24080 at 5298.702 kb on + strand, within AO353_24080 at 5298.702 kb on + strand, within AO353_24080 at 5298.823 kb on + strand, within AO353_24080 at 5298.972 kb on + strand, within AO353_24080 at 5298.980 kb on + strand, within AO353_24080 at 5298.981 kb on - strand, within AO353_24080 at 5298.995 kb on + strand, within AO353_24080 at 5298.996 kb on - strand, within AO353_24080 at 5298.996 kb on - strand, within AO353_24080 at 5299.035 kb on - strand, within AO353_24080 at 5299.060 kb on - strand, within AO353_24080 at 5299.094 kb on - strand, within AO353_24080 at 5299.153 kb on + strand, within AO353_24080 at 5299.154 kb on - strand, within AO353_24080 at 5299.154 kb on - strand, within AO353_24080 at 5299.309 kb on + strand at 5299.309 kb on + strand at 5299.310 kb on - strand at 5299.310 kb on - strand at 5299.310 kb on - strand at 5299.310 kb on - strand at 5299.310 kb on - strand at 5299.310 kb on - strand at 5299.310 kb on - strand at 5299.597 kb on - strand at 5299.655 kb on + strand at 5299.655 kb on + strand at 5299.656 kb on - strand at 5299.656 kb on - strand at 5299.656 kb on - strand at 5299.733 kb on + strand, within AO353_24085 at 5299.733 kb on + strand, within AO353_24085 at 5299.733 kb on + strand, within AO353_24085 at 5299.733 kb on + strand, within AO353_24085 at 5299.734 kb on - strand, within AO353_24085 at 5299.744 kb on + strand, within AO353_24085 at 5299.875 kb on + strand, within AO353_24085 at 5299.875 kb on + strand, within AO353_24085 at 5299.939 kb on + strand, within AO353_24085 at 5299.939 kb on + strand, within AO353_24085 at 5299.939 kb on + strand, within AO353_24085 at 5299.940 kb on - strand, within AO353_24085 at 5299.940 kb on - strand, within AO353_24085 at 5300.202 kb on - strand, within AO353_24085 at 5300.230 kb on + strand, within AO353_24085 at 5300.230 kb on + strand, within AO353_24085 at 5300.231 kb on - strand, within AO353_24085 at 5300.382 kb on + strand, within AO353_24085 at 5300.382 kb on + strand, within AO353_24085 at 5300.382 kb on + strand, within AO353_24085 at 5300.383 kb on - strand, within AO353_24085 at 5300.383 kb on - strand, within AO353_24085 at 5300.387 kb on - strand, within AO353_24085 at 5300.387 kb on - strand, within AO353_24085 at 5300.387 kb on - strand, within AO353_24085 at 5300.387 kb on - strand, within AO353_24085 at 5300.387 kb on - strand, within AO353_24085
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 5,297,392 + AO353_24075 0.54 +1.0 5,297,392 + AO353_24075 0.54 +0.4 5,297,392 + AO353_24075 0.54 -2.2 5,297,392 + AO353_24075 0.54 +0.0 5,297,416 + AO353_24075 0.55 -0.2 5,297,417 - AO353_24075 0.55 +1.9 5,297,436 + AO353_24075 0.57 +2.1 5,297,457 - AO353_24075 0.58 +1.9 5,297,457 - AO353_24075 0.58 +1.4 5,297,509 + AO353_24075 0.62 +0.4 5,297,509 + AO353_24075 0.62 -0.9 5,297,509 + AO353_24075 0.62 +1.8 5,297,509 + AO353_24075 0.62 -1.8 5,297,509 + AO353_24075 0.62 -0.2 5,297,509 + AO353_24075 0.62 +0.2 5,297,510 - AO353_24075 0.62 -2.2 5,297,510 - AO353_24075 0.62 +0.3 5,297,510 - AO353_24075 0.62 -1.8 5,297,510 - AO353_24075 0.62 +0.9 5,297,510 - AO353_24075 0.62 -0.7 5,297,625 + AO353_24075 0.70 +0.6 5,297,625 + AO353_24075 0.70 -2.8 5,297,625 + AO353_24075 0.70 +1.6 5,297,625 + AO353_24075 0.70 +0.2 5,297,625 + AO353_24075 0.70 +1.4 5,297,626 - AO353_24075 0.70 -1.2 5,297,626 - AO353_24075 0.70 +1.4 5,297,657 - AO353_24075 0.72 +0.8 5,297,729 - AO353_24075 0.77 -0.5 5,297,729 - AO353_24075 0.77 -0.5 5,297,769 + AO353_24075 0.79 -0.0 5,297,769 + AO353_24075 0.79 +1.2 5,297,769 + AO353_24075 0.79 -0.2 5,297,770 - AO353_24075 0.80 +0.2 5,297,770 - AO353_24075 0.80 +1.2 5,297,962 + +0.0 5,297,963 - +0.1 5,297,963 - +0.7 5,298,074 + -0.2 5,298,145 + +0.2 5,298,145 + +1.4 5,298,145 + +0.8 5,298,146 - -0.6 5,298,146 - +1.4 5,298,146 - -0.0 5,298,166 - +2.4 5,298,166 - +0.6 5,298,166 - -0.5 5,298,187 + +0.9 5,298,188 - +1.2 5,298,188 - -1.2 5,298,188 - -0.2 5,298,188 - +0.5 5,298,273 + -1.2 5,298,277 + +0.2 5,298,277 + -0.2 5,298,277 + +0.5 5,298,278 - -1.0 5,298,278 - -0.3 5,298,287 + -1.2 5,298,288 - +0.5 5,298,288 - -2.0 5,298,455 - AO353_24080 0.15 -1.4 5,298,455 - AO353_24080 0.15 +0.8 5,298,455 - AO353_24080 0.15 +0.4 5,298,702 + AO353_24080 0.37 -1.8 5,298,702 + AO353_24080 0.37 +1.2 5,298,823 + AO353_24080 0.48 -1.8 5,298,972 + AO353_24080 0.62 -2.2 5,298,980 + AO353_24080 0.62 -0.5 5,298,981 - AO353_24080 0.62 +1.8 5,298,995 + AO353_24080 0.64 -0.1 5,298,996 - AO353_24080 0.64 -0.2 5,298,996 - AO353_24080 0.64 +0.8 5,299,035 - AO353_24080 0.67 +1.6 5,299,060 - AO353_24080 0.70 +1.1 5,299,094 - AO353_24080 0.73 +0.1 5,299,153 + AO353_24080 0.78 +1.1 5,299,154 - AO353_24080 0.78 +0.5 5,299,154 - AO353_24080 0.78 +0.8 5,299,309 + -0.7 5,299,309 + +0.8 5,299,310 - -1.2 5,299,310 - -1.9 5,299,310 - +0.6 5,299,310 - -1.8 5,299,310 - -0.2 5,299,310 - +0.8 5,299,310 - -0.6 5,299,597 - +0.1 5,299,655 + +0.2 5,299,655 + -0.4 5,299,656 - -0.8 5,299,656 - +0.9 5,299,656 - -0.9 5,299,733 + AO353_24085 0.11 +0.2 5,299,733 + AO353_24085 0.11 -0.2 5,299,733 + AO353_24085 0.11 -0.2 5,299,733 + AO353_24085 0.11 -2.2 5,299,734 - AO353_24085 0.11 -0.2 5,299,744 + AO353_24085 0.11 -0.2 5,299,875 + AO353_24085 0.15 +0.2 5,299,875 + AO353_24085 0.15 +1.6 5,299,939 + AO353_24085 0.17 +1.0 5,299,939 + AO353_24085 0.17 -2.2 5,299,939 + AO353_24085 0.17 +1.0 5,299,940 - AO353_24085 0.17 -1.0 5,299,940 - AO353_24085 0.17 +0.2 5,300,202 - AO353_24085 0.26 +1.0 5,300,230 + AO353_24085 0.27 +1.6 5,300,230 + AO353_24085 0.27 +0.4 5,300,231 - AO353_24085 0.27 +0.6 5,300,382 + AO353_24085 0.31 -1.2 5,300,382 + AO353_24085 0.31 +0.2 5,300,382 + AO353_24085 0.31 -0.7 5,300,383 - AO353_24085 0.32 -1.0 5,300,383 - AO353_24085 0.32 +1.0 5,300,387 - AO353_24085 0.32 -2.1 5,300,387 - AO353_24085 0.32 +0.8 5,300,387 - AO353_24085 0.32 -0.6 5,300,387 - AO353_24085 0.32 -0.7 5,300,387 - AO353_24085 0.32 -0.2
Or see this region's nucleotide sequence