Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23545 and AO353_23550 are separated by 15 nucleotides AO353_23550 and AO353_23555 are separated by 119 nucleotides AO353_23555 and AO353_23560 are separated by 334 nucleotides
AO353_23545: AO353_23545 - NADH oxidase, at 5,156,203 to 5,157,216
_23545
AO353_23550: AO353_23550 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase, at 5,157,232 to 5,158,005
_23550
AO353_23555: AO353_23555 - DNA polymerase III subunit epsilon, at 5,158,125 to 5,158,883
_23555
AO353_23560: AO353_23560 - lysine decarboxylase, at 5,159,218 to 5,161,473
_23560
Position (kb)
5158
5159 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5157.184 kb on + strand at 5157.185 kb on - strand at 5157.187 kb on + strand at 5157.215 kb on - strand at 5157.241 kb on + strand at 5157.241 kb on + strand at 5157.242 kb on - strand at 5157.242 kb on - strand at 5157.242 kb on - strand at 5157.242 kb on - strand at 5157.306 kb on + strand at 5157.307 kb on - strand at 5157.424 kb on + strand, within AO353_23550 at 5157.480 kb on + strand at 5157.481 kb on - strand, within AO353_23550 at 5157.481 kb on - strand, within AO353_23550 at 5157.481 kb on - strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.482 kb on + strand, within AO353_23550 at 5157.483 kb on - strand, within AO353_23550 at 5157.483 kb on - strand, within AO353_23550 at 5157.483 kb on - strand, within AO353_23550 at 5157.533 kb on - strand, within AO353_23550 at 5157.686 kb on - strand, within AO353_23550 at 5157.958 kb on + strand at 5157.958 kb on + strand at 5157.958 kb on + strand at 5157.958 kb on + strand at 5157.958 kb on + strand at 5157.959 kb on - strand at 5158.077 kb on + strand at 5158.881 kb on + strand at 5158.881 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.046 kb on + strand at 5159.166 kb on - strand at 5159.176 kb on + strand at 5159.176 kb on + strand at 5159.187 kb on + strand at 5159.188 kb on - strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.221 kb on + strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.222 kb on - strand at 5159.223 kb on + strand at 5159.223 kb on + strand at 5159.224 kb on - strand at 5159.246 kb on + strand at 5159.246 kb on + strand at 5159.246 kb on + strand at 5159.247 kb on - strand at 5159.247 kb on - strand at 5159.353 kb on + strand at 5159.353 kb on + strand at 5159.353 kb on + strand at 5159.444 kb on + strand, within AO353_23560 at 5159.584 kb on + strand, within AO353_23560 at 5159.585 kb on - strand, within AO353_23560 at 5159.585 kb on - strand, within AO353_23560 at 5159.585 kb on - strand, within AO353_23560 at 5159.585 kb on - strand, within AO353_23560 at 5159.585 kb on - strand, within AO353_23560 at 5159.585 kb on - strand, within AO353_23560 at 5159.585 kb on - strand, within AO353_23560 at 5159.707 kb on + strand, within AO353_23560 at 5159.707 kb on + strand, within AO353_23560 at 5159.707 kb on + strand, within AO353_23560 at 5159.708 kb on - strand, within AO353_23560 at 5159.708 kb on - strand, within AO353_23560 at 5159.708 kb on - strand, within AO353_23560 at 5159.708 kb on - strand, within AO353_23560 at 5159.708 kb on - strand, within AO353_23560 at 5159.708 kb on - strand, within AO353_23560 at 5159.746 kb on + strand, within AO353_23560 at 5159.763 kb on - strand, within AO353_23560 at 5159.797 kb on - strand, within AO353_23560 at 5159.797 kb on - strand, within AO353_23560 at 5159.797 kb on - strand, within AO353_23560 at 5159.797 kb on - strand, within AO353_23560
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 5,157,184 + -0.2 5,157,185 - +0.8 5,157,187 + -1.8 5,157,215 - +0.0 5,157,241 + +0.1 5,157,241 + +1.4 5,157,242 - +1.4 5,157,242 - -0.7 5,157,242 - -0.5 5,157,242 - +1.4 5,157,306 + -1.2 5,157,307 - +0.2 5,157,424 + AO353_23550 0.25 +0.2 5,157,480 + +0.4 5,157,481 - AO353_23550 0.32 +2.2 5,157,481 - AO353_23550 0.32 -0.2 5,157,481 - AO353_23550 0.32 +0.8 5,157,482 + AO353_23550 0.32 +1.8 5,157,482 + AO353_23550 0.32 +0.9 5,157,482 + +0.1 5,157,482 + AO353_23550 0.32 -1.2 5,157,482 + AO353_23550 0.32 -0.2 5,157,482 + AO353_23550 0.32 -0.0 5,157,482 + AO353_23550 0.32 +0.0 5,157,482 + AO353_23550 0.32 -0.2 5,157,482 + AO353_23550 0.32 -0.0 5,157,482 + AO353_23550 0.32 +1.4 5,157,483 - AO353_23550 0.32 +0.8 5,157,483 - AO353_23550 0.32 +1.7 5,157,483 - AO353_23550 0.32 -0.2 5,157,533 - AO353_23550 0.39 +0.2 5,157,686 - AO353_23550 0.59 +0.2 5,157,958 + +0.2 5,157,958 + +1.5 5,157,958 + -0.8 5,157,958 + -0.2 5,157,958 + -0.2 5,157,959 - -0.2 5,158,077 + -1.2 5,158,881 + +0.8 5,158,881 + +0.5 5,159,046 + -0.2 5,159,046 + -1.2 5,159,046 + -2.0 5,159,046 + -1.0 5,159,046 + +2.4 5,159,046 + +0.2 5,159,046 + -0.8 5,159,046 + +0.6 5,159,046 + +0.6 5,159,046 + -0.5 5,159,046 + +0.2 5,159,166 - -2.5 5,159,176 + -1.0 5,159,176 + +0.4 5,159,187 + +0.3 5,159,188 - +1.1 5,159,221 + +1.4 5,159,221 + +0.4 5,159,221 + +0.0 5,159,221 + +1.6 5,159,221 + -1.0 5,159,221 + +1.6 5,159,221 + -0.2 5,159,221 + -0.8 5,159,221 + -0.6 5,159,222 - +0.9 5,159,222 - +0.0 5,159,222 - -0.6 5,159,222 - +0.6 5,159,222 - -0.5 5,159,222 - +1.1 5,159,222 - -0.4 5,159,222 - +0.4 5,159,222 - -0.4 5,159,223 + +1.6 5,159,223 + +0.6 5,159,224 - -0.2 5,159,246 + +0.6 5,159,246 + +0.6 5,159,246 + -0.4 5,159,247 - +0.8 5,159,247 - -0.8 5,159,353 + +0.7 5,159,353 + +0.6 5,159,353 + -1.2 5,159,444 + AO353_23560 0.10 +0.0 5,159,584 + AO353_23560 0.16 +0.3 5,159,585 - AO353_23560 0.16 +0.8 5,159,585 - AO353_23560 0.16 +0.7 5,159,585 - AO353_23560 0.16 -1.2 5,159,585 - AO353_23560 0.16 -0.5 5,159,585 - AO353_23560 0.16 -0.7 5,159,585 - AO353_23560 0.16 +0.5 5,159,585 - AO353_23560 0.16 +0.8 5,159,707 + AO353_23560 0.22 -0.2 5,159,707 + AO353_23560 0.22 -0.2 5,159,707 + AO353_23560 0.22 +0.8 5,159,708 - AO353_23560 0.22 +1.5 5,159,708 - AO353_23560 0.22 -0.8 5,159,708 - AO353_23560 0.22 -1.1 5,159,708 - AO353_23560 0.22 -0.2 5,159,708 - AO353_23560 0.22 -0.2 5,159,708 - AO353_23560 0.22 -1.1 5,159,746 + AO353_23560 0.23 -0.5 5,159,763 - AO353_23560 0.24 -1.2 5,159,797 - AO353_23560 0.26 +0.0 5,159,797 - AO353_23560 0.26 -1.6 5,159,797 - AO353_23560 0.26 -2.2 5,159,797 - AO353_23560 0.26 +0.8
Or see this region's nucleotide sequence