Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23120 and AO353_23125 are separated by 21 nucleotides AO353_23125 and AO353_23130 are separated by 16 nucleotides AO353_23130 and AO353_23135 overlap by 4 nucleotides
AO353_23120: AO353_23120 - 3-phenylpropionate dioxygenase, at 5,074,333 to 5,075,367
_23120
AO353_23125: AO353_23125 - hypothetical protein, at 5,075,389 to 5,075,616
_23125
AO353_23130: AO353_23130 - glyoxalase, at 5,075,633 to 5,076,598
_23130
AO353_23135: AO353_23135 - aldehyde dehydrogenase, at 5,076,595 to 5,078,091
_23135
Position (kb)
5075
5076 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5074.526 kb on + strand, within AO353_23120 at 5074.527 kb on - strand, within AO353_23120 at 5074.617 kb on - strand, within AO353_23120 at 5074.794 kb on + strand, within AO353_23120 at 5074.835 kb on + strand, within AO353_23120 at 5074.835 kb on + strand, within AO353_23120 at 5074.835 kb on + strand, within AO353_23120 at 5074.835 kb on + strand, within AO353_23120 at 5074.836 kb on - strand, within AO353_23120 at 5074.875 kb on - strand, within AO353_23120 at 5074.901 kb on + strand, within AO353_23120 at 5074.901 kb on + strand, within AO353_23120 at 5074.991 kb on + strand, within AO353_23120 at 5074.991 kb on + strand, within AO353_23120 at 5074.991 kb on + strand, within AO353_23120 at 5074.991 kb on + strand, within AO353_23120 at 5074.992 kb on - strand, within AO353_23120 at 5075.104 kb on + strand, within AO353_23120 at 5075.105 kb on - strand, within AO353_23120 at 5075.105 kb on - strand, within AO353_23120 at 5075.120 kb on + strand, within AO353_23120 at 5075.241 kb on - strand, within AO353_23120 at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.355 kb on + strand at 5075.356 kb on - strand at 5075.356 kb on - strand at 5075.356 kb on - strand at 5075.356 kb on - strand at 5075.361 kb on + strand at 5075.361 kb on + strand at 5075.362 kb on - strand at 5075.372 kb on + strand at 5075.372 kb on + strand at 5075.372 kb on + strand at 5075.373 kb on - strand at 5075.373 kb on - strand at 5075.373 kb on - strand at 5075.373 kb on - strand at 5075.373 kb on - strand at 5075.376 kb on + strand at 5075.376 kb on + strand at 5075.376 kb on + strand at 5075.418 kb on + strand, within AO353_23125 at 5075.418 kb on + strand, within AO353_23125 at 5075.418 kb on + strand, within AO353_23125 at 5075.418 kb on + strand, within AO353_23125 at 5075.419 kb on - strand, within AO353_23125 at 5075.419 kb on - strand, within AO353_23125 at 5075.419 kb on - strand, within AO353_23125 at 5075.420 kb on + strand, within AO353_23125 at 5075.420 kb on + strand, within AO353_23125 at 5075.420 kb on + strand, within AO353_23125 at 5075.421 kb on - strand, within AO353_23125 at 5075.421 kb on - strand, within AO353_23125 at 5075.597 kb on + strand at 5075.597 kb on + strand at 5075.597 kb on + strand at 5075.598 kb on - strand at 5075.634 kb on + strand at 5075.634 kb on + strand at 5075.635 kb on - strand at 5075.802 kb on + strand, within AO353_23130 at 5075.802 kb on + strand, within AO353_23130 at 5075.802 kb on + strand, within AO353_23130 at 5075.803 kb on - strand, within AO353_23130 at 5075.803 kb on - strand, within AO353_23130 at 5075.803 kb on - strand, within AO353_23130 at 5075.805 kb on + strand, within AO353_23130 at 5075.806 kb on - strand, within AO353_23130 at 5075.928 kb on - strand, within AO353_23130 at 5075.928 kb on - strand, within AO353_23130 at 5076.093 kb on + strand, within AO353_23130 at 5076.094 kb on - strand, within AO353_23130 at 5076.094 kb on - strand, within AO353_23130 at 5076.168 kb on + strand, within AO353_23130 at 5076.168 kb on + strand, within AO353_23130 at 5076.169 kb on - strand, within AO353_23130 at 5076.169 kb on - strand, within AO353_23130 at 5076.348 kb on + strand, within AO353_23130 at 5076.348 kb on + strand, within AO353_23130 at 5076.349 kb on - strand, within AO353_23130 at 5076.567 kb on + strand at 5076.567 kb on + strand at 5076.567 kb on + strand at 5076.568 kb on - strand at 5076.588 kb on - strand at 5076.598 kb on + strand at 5076.598 kb on + strand at 5076.598 kb on + strand at 5076.598 kb on + strand at 5076.599 kb on - strand at 5076.604 kb on + strand at 5076.604 kb on + strand at 5076.604 kb on + strand at 5076.604 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 5,074,526 + AO353_23120 0.19 +0.1 5,074,527 - AO353_23120 0.19 +0.8 5,074,617 - AO353_23120 0.27 +1.8 5,074,794 + AO353_23120 0.45 -0.8 5,074,835 + AO353_23120 0.49 -0.2 5,074,835 + AO353_23120 0.49 +0.6 5,074,835 + AO353_23120 0.49 +1.8 5,074,835 + AO353_23120 0.49 -0.8 5,074,836 - AO353_23120 0.49 -0.3 5,074,875 - AO353_23120 0.52 +0.2 5,074,901 + AO353_23120 0.55 +0.4 5,074,901 + AO353_23120 0.55 +0.4 5,074,991 + AO353_23120 0.64 -0.2 5,074,991 + AO353_23120 0.64 +0.6 5,074,991 + AO353_23120 0.64 +3.4 5,074,991 + AO353_23120 0.64 +0.8 5,074,992 - AO353_23120 0.64 +1.6 5,075,104 + AO353_23120 0.74 -1.2 5,075,105 - AO353_23120 0.75 +0.5 5,075,105 - AO353_23120 0.75 -0.2 5,075,120 + AO353_23120 0.76 -0.8 5,075,241 - AO353_23120 0.88 +0.0 5,075,355 + -2.1 5,075,355 + +1.0 5,075,355 + -0.2 5,075,355 + +1.8 5,075,355 + -1.8 5,075,355 + +0.0 5,075,355 + +2.4 5,075,355 + +0.8 5,075,355 + +0.2 5,075,355 + +0.3 5,075,356 - -0.6 5,075,356 - -1.2 5,075,356 - -1.5 5,075,356 - -1.5 5,075,361 + +1.4 5,075,361 + +0.2 5,075,362 - -0.7 5,075,372 + -1.2 5,075,372 + +1.4 5,075,372 + +1.1 5,075,373 - -1.8 5,075,373 - +0.0 5,075,373 - -0.8 5,075,373 - -1.5 5,075,373 - +0.2 5,075,376 + +0.8 5,075,376 + +1.3 5,075,376 + +0.6 5,075,418 + AO353_23125 0.13 +1.9 5,075,418 + AO353_23125 0.13 +1.8 5,075,418 + AO353_23125 0.13 +1.7 5,075,418 + AO353_23125 0.13 +0.8 5,075,419 - AO353_23125 0.13 -0.1 5,075,419 - AO353_23125 0.13 +0.1 5,075,419 - AO353_23125 0.13 +2.1 5,075,420 + AO353_23125 0.14 -0.2 5,075,420 + AO353_23125 0.14 -1.8 5,075,420 + AO353_23125 0.14 -0.4 5,075,421 - AO353_23125 0.14 +0.2 5,075,421 - AO353_23125 0.14 +0.7 5,075,597 + -0.2 5,075,597 + -0.8 5,075,597 + +1.1 5,075,598 - +0.5 5,075,634 + -0.8 5,075,634 + -2.2 5,075,635 - +0.0 5,075,802 + AO353_23130 0.17 +0.0 5,075,802 + AO353_23130 0.17 -0.2 5,075,802 + AO353_23130 0.17 -0.0 5,075,803 - AO353_23130 0.18 +1.1 5,075,803 - AO353_23130 0.18 -1.8 5,075,803 - AO353_23130 0.18 -0.4 5,075,805 + AO353_23130 0.18 -0.6 5,075,806 - AO353_23130 0.18 -0.8 5,075,928 - AO353_23130 0.31 +1.7 5,075,928 - AO353_23130 0.31 +0.8 5,076,093 + AO353_23130 0.48 -0.2 5,076,094 - AO353_23130 0.48 +0.2 5,076,094 - AO353_23130 0.48 -0.5 5,076,168 + AO353_23130 0.55 +0.4 5,076,168 + AO353_23130 0.55 -1.2 5,076,169 - AO353_23130 0.55 +2.1 5,076,169 - AO353_23130 0.55 +0.2 5,076,348 + AO353_23130 0.74 -0.2 5,076,348 + AO353_23130 0.74 +0.0 5,076,349 - AO353_23130 0.74 +0.8 5,076,567 + -0.9 5,076,567 + +0.4 5,076,567 + -1.0 5,076,568 - -0.5 5,076,588 - +1.4 5,076,598 + +1.7 5,076,598 + -0.2 5,076,598 + -0.2 5,076,598 + -0.0 5,076,599 - +0.8 5,076,604 + +0.3 5,076,604 + -0.7 5,076,604 + +1.2 5,076,604 + -0.8
Or see this region's nucleotide sequence