Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22700 and AO353_22705 overlap by 1 nucleotides AO353_22705 and AO353_22710 are separated by 7 nucleotides AO353_22710 and AO353_22715 overlap by 4 nucleotides
AO353_22700: AO353_22700 - LexA family transcriptional regulator, at 4,970,668 to 4,971,285
_22700
AO353_22705: AO353_22705 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 4,971,285 to 4,971,902
_22705
AO353_22710: AO353_22710 - DNA repair nucleotidyltransferase, at 4,971,910 to 4,973,325
_22710
AO353_22715: AO353_22715 - DNA polymerase, at 4,973,322 to 4,976,399
_22715
Position (kb)
4971
4972
4973
4974 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4971.019 kb on + strand, within AO353_22700 at 4971.208 kb on + strand, within AO353_22700 at 4971.209 kb on - strand, within AO353_22700 at 4971.209 kb on - strand, within AO353_22700 at 4971.543 kb on + strand, within AO353_22705 at 4971.543 kb on + strand, within AO353_22705 at 4971.543 kb on + strand, within AO353_22705 at 4971.543 kb on + strand, within AO353_22705 at 4971.543 kb on + strand, within AO353_22705 at 4971.543 kb on + strand, within AO353_22705 at 4971.543 kb on + strand, within AO353_22705 at 4971.544 kb on - strand, within AO353_22705 at 4971.779 kb on + strand, within AO353_22705 at 4971.835 kb on + strand, within AO353_22705 at 4971.924 kb on + strand at 4971.924 kb on + strand at 4971.925 kb on - strand at 4971.925 kb on - strand at 4971.925 kb on - strand at 4972.123 kb on + strand, within AO353_22710 at 4972.123 kb on + strand, within AO353_22710 at 4972.123 kb on + strand, within AO353_22710 at 4972.367 kb on - strand at 4972.367 kb on - strand, within AO353_22710 at 4972.367 kb on - strand, within AO353_22710 at 4972.367 kb on - strand, within AO353_22710 at 4972.401 kb on - strand, within AO353_22710 at 4972.600 kb on + strand, within AO353_22710 at 4972.601 kb on - strand, within AO353_22710 at 4972.601 kb on - strand, within AO353_22710 at 4973.108 kb on + strand, within AO353_22710 at 4973.108 kb on + strand, within AO353_22710 at 4973.108 kb on + strand, within AO353_22710 at 4973.108 kb on + strand, within AO353_22710 at 4973.108 kb on + strand, within AO353_22710 at 4973.109 kb on - strand, within AO353_22710 at 4973.109 kb on - strand, within AO353_22710 at 4973.109 kb on - strand, within AO353_22710 at 4973.109 kb on - strand, within AO353_22710 at 4973.109 kb on - strand, within AO353_22710 at 4973.109 kb on - strand, within AO353_22710 at 4973.230 kb on + strand at 4973.230 kb on + strand at 4973.230 kb on + strand at 4973.230 kb on + strand at 4973.231 kb on - strand at 4973.233 kb on + strand at 4973.233 kb on + strand at 4973.233 kb on + strand at 4973.233 kb on + strand at 4973.233 kb on + strand at 4973.234 kb on - strand at 4973.234 kb on - strand at 4973.234 kb on - strand at 4973.277 kb on + strand at 4973.277 kb on + strand at 4973.278 kb on - strand at 4973.278 kb on - strand at 4973.278 kb on - strand at 4973.503 kb on + strand at 4973.504 kb on - strand at 4973.504 kb on - strand at 4973.741 kb on + strand, within AO353_22715 at 4974.009 kb on + strand, within AO353_22715 at 4974.056 kb on + strand, within AO353_22715 at 4974.056 kb on + strand, within AO353_22715 at 4974.057 kb on - strand, within AO353_22715 at 4974.057 kb on - strand, within AO353_22715 at 4974.134 kb on - strand, within AO353_22715 at 4974.249 kb on + strand, within AO353_22715 at 4974.249 kb on + strand, within AO353_22715 at 4974.249 kb on + strand, within AO353_22715 at 4974.249 kb on + strand, within AO353_22715 at 4974.250 kb on - strand, within AO353_22715 at 4974.250 kb on - strand, within AO353_22715 at 4974.250 kb on - strand, within AO353_22715 at 4974.250 kb on - strand, within AO353_22715
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,971,019 + AO353_22700 0.57 +0.8 4,971,208 + AO353_22700 0.87 -0.2 4,971,209 - AO353_22700 0.88 -0.7 4,971,209 - AO353_22700 0.88 +0.1 4,971,543 + AO353_22705 0.42 -0.6 4,971,543 + AO353_22705 0.42 -0.2 4,971,543 + AO353_22705 0.42 +1.1 4,971,543 + AO353_22705 0.42 +0.8 4,971,543 + AO353_22705 0.42 +1.1 4,971,543 + AO353_22705 0.42 +1.4 4,971,543 + AO353_22705 0.42 -0.1 4,971,544 - AO353_22705 0.42 -1.4 4,971,779 + AO353_22705 0.80 -0.2 4,971,835 + AO353_22705 0.89 -1.8 4,971,924 + -1.8 4,971,924 + +0.8 4,971,925 - +0.8 4,971,925 - +1.4 4,971,925 - -0.6 4,972,123 + AO353_22710 0.15 +0.0 4,972,123 + AO353_22710 0.15 -2.8 4,972,123 + AO353_22710 0.15 +1.6 4,972,367 - -0.5 4,972,367 - AO353_22710 0.32 +1.4 4,972,367 - AO353_22710 0.32 +0.1 4,972,367 - AO353_22710 0.32 +1.1 4,972,401 - AO353_22710 0.35 -0.9 4,972,600 + AO353_22710 0.49 -0.6 4,972,601 - AO353_22710 0.49 -0.2 4,972,601 - AO353_22710 0.49 -1.4 4,973,108 + AO353_22710 0.85 -1.2 4,973,108 + AO353_22710 0.85 +1.4 4,973,108 + AO353_22710 0.85 +0.0 4,973,108 + AO353_22710 0.85 +0.1 4,973,108 + AO353_22710 0.85 -0.2 4,973,109 - AO353_22710 0.85 -1.5 4,973,109 - AO353_22710 0.85 +0.8 4,973,109 - AO353_22710 0.85 -0.5 4,973,109 - AO353_22710 0.85 +0.4 4,973,109 - AO353_22710 0.85 -1.8 4,973,109 - AO353_22710 0.85 +1.4 4,973,230 + +0.4 4,973,230 + +0.8 4,973,230 + +1.3 4,973,230 + +0.8 4,973,231 - -2.0 4,973,233 + +1.3 4,973,233 + +0.5 4,973,233 + -0.3 4,973,233 + -0.4 4,973,233 + +1.0 4,973,234 - +0.5 4,973,234 - +0.5 4,973,234 - -0.9 4,973,277 + +0.3 4,973,277 + +0.4 4,973,278 - -2.2 4,973,278 - -1.8 4,973,278 - -0.2 4,973,503 + -1.2 4,973,504 - +0.4 4,973,504 - +0.1 4,973,741 + AO353_22715 0.14 -1.8 4,974,009 + AO353_22715 0.22 +1.1 4,974,056 + AO353_22715 0.24 +0.3 4,974,056 + AO353_22715 0.24 -1.2 4,974,057 - AO353_22715 0.24 -0.6 4,974,057 - AO353_22715 0.24 +0.1 4,974,134 - AO353_22715 0.26 -2.4 4,974,249 + AO353_22715 0.30 -0.2 4,974,249 + AO353_22715 0.30 -2.2 4,974,249 + AO353_22715 0.30 -0.2 4,974,249 + AO353_22715 0.30 -0.5 4,974,250 - AO353_22715 0.30 +0.8 4,974,250 - AO353_22715 0.30 -0.2 4,974,250 - AO353_22715 0.30 +0.4 4,974,250 - AO353_22715 0.30 +1.3
Or see this region's nucleotide sequence