Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21970 and AO353_21975 are separated by 199 nucleotides AO353_21975 and AO353_21980 overlap by 17 nucleotides AO353_21980 and AO353_21985 are separated by 11 nucleotides
AO353_21970: AO353_21970 - nitrite reductase, at 4,812,731 to 4,814,422
_21970
AO353_21975: AO353_21975 - AAA family ATPase, at 4,814,622 to 4,815,425
_21975
AO353_21980: AO353_21980 - cytochrome C oxidase, at 4,815,409 to 4,815,996
_21980
AO353_21985: AO353_21985 - hypothetical protein, at 4,816,008 to 4,816,265
_21985
Position (kb)
4814
4815
4816 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4813.629 kb on + strand, within AO353_21970 at 4813.630 kb on - strand, within AO353_21970 at 4813.647 kb on + strand, within AO353_21970 at 4813.647 kb on + strand, within AO353_21970 at 4813.647 kb on + strand, within AO353_21970 at 4813.647 kb on + strand, within AO353_21970 at 4813.647 kb on + strand, within AO353_21970 at 4813.647 kb on + strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.648 kb on - strand, within AO353_21970 at 4813.807 kb on + strand, within AO353_21970 at 4813.807 kb on + strand, within AO353_21970 at 4813.808 kb on - strand, within AO353_21970 at 4813.828 kb on - strand, within AO353_21970 at 4813.922 kb on + strand, within AO353_21970 at 4813.922 kb on + strand, within AO353_21970 at 4813.923 kb on - strand, within AO353_21970 at 4813.923 kb on - strand, within AO353_21970 at 4813.974 kb on - strand, within AO353_21970 at 4813.974 kb on - strand, within AO353_21970 at 4814.118 kb on + strand, within AO353_21970 at 4814.118 kb on + strand, within AO353_21970 at 4814.118 kb on + strand, within AO353_21970 at 4814.118 kb on + strand, within AO353_21970 at 4814.118 kb on + strand, within AO353_21970 at 4814.119 kb on - strand, within AO353_21970 at 4814.119 kb on - strand, within AO353_21970 at 4814.119 kb on - strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.122 kb on + strand, within AO353_21970 at 4814.123 kb on - strand, within AO353_21970 at 4814.123 kb on - strand, within AO353_21970 at 4814.123 kb on - strand, within AO353_21970 at 4814.123 kb on - strand, within AO353_21970 at 4814.139 kb on + strand, within AO353_21970 at 4814.235 kb on + strand, within AO353_21970 at 4814.235 kb on + strand, within AO353_21970 at 4814.236 kb on - strand, within AO353_21970 at 4814.236 kb on - strand, within AO353_21970 at 4814.236 kb on - strand, within AO353_21970 at 4814.236 kb on - strand, within AO353_21970 at 4814.236 kb on - strand, within AO353_21970 at 4814.236 kb on - strand, within AO353_21970 at 4814.407 kb on + strand at 4814.407 kb on + strand at 4814.408 kb on - strand at 4814.486 kb on + strand at 4814.486 kb on + strand at 4814.502 kb on + strand at 4814.502 kb on + strand at 4814.503 kb on - strand at 4814.583 kb on + strand at 4814.583 kb on + strand at 4814.584 kb on - strand at 4814.664 kb on + strand at 4814.664 kb on + strand at 4814.665 kb on - strand at 4814.665 kb on - strand at 4814.679 kb on - strand at 4814.802 kb on + strand, within AO353_21975 at 4814.827 kb on + strand, within AO353_21975 at 4814.827 kb on + strand, within AO353_21975 at 4814.827 kb on + strand, within AO353_21975 at 4814.828 kb on - strand, within AO353_21975 at 4814.828 kb on - strand, within AO353_21975 at 4814.828 kb on - strand, within AO353_21975 at 4814.921 kb on + strand, within AO353_21975 at 4814.921 kb on + strand, within AO353_21975 at 4814.921 kb on + strand, within AO353_21975 at 4814.922 kb on - strand, within AO353_21975 at 4814.922 kb on - strand, within AO353_21975 at 4814.929 kb on - strand, within AO353_21975 at 4815.066 kb on + strand, within AO353_21975 at 4815.066 kb on + strand, within AO353_21975 at 4815.066 kb on + strand, within AO353_21975 at 4815.066 kb on + strand, within AO353_21975 at 4815.066 kb on + strand, within AO353_21975 at 4815.066 kb on + strand, within AO353_21975 at 4815.067 kb on - strand, within AO353_21975 at 4815.067 kb on - strand, within AO353_21975 at 4815.067 kb on - strand, within AO353_21975 at 4815.580 kb on + strand, within AO353_21980 at 4815.580 kb on + strand, within AO353_21980 at 4815.580 kb on + strand, within AO353_21980 at 4815.581 kb on - strand, within AO353_21980 at 4815.581 kb on - strand, within AO353_21980 at 4815.581 kb on - strand, within AO353_21980 at 4815.581 kb on - strand, within AO353_21980 at 4815.581 kb on - strand, within AO353_21980 at 4815.721 kb on + strand, within AO353_21980 at 4815.721 kb on + strand, within AO353_21980 at 4815.721 kb on + strand, within AO353_21980 at 4815.721 kb on + strand, within AO353_21980 at 4815.722 kb on - strand, within AO353_21980 at 4815.722 kb on - strand, within AO353_21980 at 4815.722 kb on - strand, within AO353_21980 at 4815.739 kb on - strand at 4815.745 kb on + strand, within AO353_21980 at 4815.746 kb on - strand, within AO353_21980 at 4815.802 kb on + strand, within AO353_21980 at 4815.802 kb on + strand, within AO353_21980 at 4815.803 kb on - strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.836 kb on + strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.837 kb on - strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.892 kb on + strand, within AO353_21980 at 4815.893 kb on - strand, within AO353_21980 at 4815.893 kb on - strand, within AO353_21980 at 4815.893 kb on - strand, within AO353_21980 at 4815.893 kb on - strand, within AO353_21980 at 4815.934 kb on + strand, within AO353_21980 at 4815.934 kb on + strand, within AO353_21980 at 4815.935 kb on - strand, within AO353_21980 at 4815.935 kb on - strand, within AO353_21980 at 4815.935 kb on - strand, within AO353_21980 at 4815.935 kb on - strand, within AO353_21980 at 4815.982 kb on + strand at 4815.982 kb on + strand at 4815.983 kb on - strand at 4815.983 kb on - strand at 4815.983 kb on - strand at 4815.983 kb on - strand at 4816.007 kb on + strand at 4816.007 kb on + strand at 4816.007 kb on + strand at 4816.007 kb on + strand at 4816.008 kb on - strand at 4816.008 kb on - strand at 4816.057 kb on + strand, within AO353_21985 at 4816.263 kb on + strand at 4816.333 kb on + strand at 4816.333 kb on + strand at 4816.334 kb on - strand at 4816.341 kb on + strand at 4816.341 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,813,629 + AO353_21970 0.53 +2.2 4,813,630 - AO353_21970 0.53 -0.8 4,813,647 + AO353_21970 0.54 -1.2 4,813,647 + AO353_21970 0.54 -1.2 4,813,647 + AO353_21970 0.54 -0.7 4,813,647 + AO353_21970 0.54 -0.6 4,813,647 + AO353_21970 0.54 -1.2 4,813,647 + AO353_21970 0.54 +1.6 4,813,648 - AO353_21970 0.54 -2.5 4,813,648 - AO353_21970 0.54 -0.2 4,813,648 - -0.2 4,813,648 - AO353_21970 0.54 -0.9 4,813,648 - AO353_21970 0.54 -0.3 4,813,648 - AO353_21970 0.54 +1.3 4,813,648 - AO353_21970 0.54 +0.2 4,813,648 - AO353_21970 0.54 +0.8 4,813,648 - AO353_21970 0.54 -2.2 4,813,648 - AO353_21970 0.54 -0.2 4,813,648 - AO353_21970 0.54 -0.4 4,813,648 - AO353_21970 0.54 -1.3 4,813,807 + AO353_21970 0.64 -1.2 4,813,807 + AO353_21970 0.64 +1.5 4,813,808 - AO353_21970 0.64 -1.2 4,813,828 - AO353_21970 0.65 +0.1 4,813,922 + AO353_21970 0.70 +0.3 4,813,922 + AO353_21970 0.70 -1.6 4,813,923 - AO353_21970 0.70 +1.4 4,813,923 - AO353_21970 0.70 -2.2 4,813,974 - AO353_21970 0.73 +0.7 4,813,974 - AO353_21970 0.73 -1.7 4,814,118 + AO353_21970 0.82 +1.4 4,814,118 + AO353_21970 0.82 -0.2 4,814,118 + AO353_21970 0.82 -1.7 4,814,118 + AO353_21970 0.82 -0.2 4,814,118 + AO353_21970 0.82 -0.2 4,814,119 - AO353_21970 0.82 +0.5 4,814,119 - AO353_21970 0.82 -0.4 4,814,119 - AO353_21970 0.82 -1.4 4,814,122 + AO353_21970 0.82 -0.3 4,814,122 + AO353_21970 0.82 +0.8 4,814,122 + AO353_21970 0.82 -1.2 4,814,122 + AO353_21970 0.82 +2.4 4,814,122 + AO353_21970 0.82 +0.9 4,814,122 + AO353_21970 0.82 -0.2 4,814,122 + AO353_21970 0.82 -0.2 4,814,122 + AO353_21970 0.82 -0.2 4,814,122 + AO353_21970 0.82 -0.6 4,814,122 + AO353_21970 0.82 -0.2 4,814,122 + AO353_21970 0.82 -0.0 4,814,123 - AO353_21970 0.82 +1.4 4,814,123 - AO353_21970 0.82 +0.4 4,814,123 - AO353_21970 0.82 -1.0 4,814,123 - AO353_21970 0.82 -1.5 4,814,139 + AO353_21970 0.83 -1.5 4,814,235 + AO353_21970 0.89 +0.0 4,814,235 + AO353_21970 0.89 +0.1 4,814,236 - AO353_21970 0.89 +1.2 4,814,236 - AO353_21970 0.89 +1.4 4,814,236 - AO353_21970 0.89 -1.7 4,814,236 - AO353_21970 0.89 -0.2 4,814,236 - AO353_21970 0.89 -1.0 4,814,236 - AO353_21970 0.89 -0.2 4,814,407 + +2.2 4,814,407 + +0.6 4,814,408 - -0.2 4,814,486 + +1.4 4,814,486 + -0.7 4,814,502 + +2.2 4,814,502 + -0.2 4,814,503 - -0.2 4,814,583 + +0.2 4,814,583 + -1.7 4,814,584 - +0.4 4,814,664 + -0.6 4,814,664 + +0.0 4,814,665 - -0.7 4,814,665 - -0.4 4,814,679 - -2.3 4,814,802 + AO353_21975 0.22 +0.6 4,814,827 + AO353_21975 0.25 +0.8 4,814,827 + AO353_21975 0.25 +0.3 4,814,827 + AO353_21975 0.25 +1.4 4,814,828 - AO353_21975 0.26 +0.4 4,814,828 - AO353_21975 0.26 +0.6 4,814,828 - AO353_21975 0.26 +0.4 4,814,921 + AO353_21975 0.37 -2.5 4,814,921 + AO353_21975 0.37 +0.2 4,814,921 + AO353_21975 0.37 -1.2 4,814,922 - AO353_21975 0.37 +0.3 4,814,922 - AO353_21975 0.37 -2.0 4,814,929 - AO353_21975 0.38 -0.7 4,815,066 + AO353_21975 0.55 -1.5 4,815,066 + AO353_21975 0.55 -0.2 4,815,066 + AO353_21975 0.55 -0.2 4,815,066 + AO353_21975 0.55 +1.4 4,815,066 + AO353_21975 0.55 +1.3 4,815,066 + AO353_21975 0.55 +1.4 4,815,067 - AO353_21975 0.55 +0.4 4,815,067 - AO353_21975 0.55 +0.4 4,815,067 - AO353_21975 0.55 +0.8 4,815,580 + AO353_21980 0.29 -0.4 4,815,580 + AO353_21980 0.29 +1.3 4,815,580 + AO353_21980 0.29 -0.4 4,815,581 - AO353_21980 0.29 -1.0 4,815,581 - AO353_21980 0.29 +0.2 4,815,581 - AO353_21980 0.29 +1.4 4,815,581 - AO353_21980 0.29 +0.8 4,815,581 - AO353_21980 0.29 -1.2 4,815,721 + AO353_21980 0.53 -2.7 4,815,721 + AO353_21980 0.53 -0.4 4,815,721 + AO353_21980 0.53 +0.8 4,815,721 + AO353_21980 0.53 +0.3 4,815,722 - AO353_21980 0.53 -1.7 4,815,722 - AO353_21980 0.53 -0.7 4,815,722 - AO353_21980 0.53 -1.2 4,815,739 - +1.4 4,815,745 + AO353_21980 0.57 -1.9 4,815,746 - AO353_21980 0.57 -1.0 4,815,802 + AO353_21980 0.67 +0.3 4,815,802 + AO353_21980 0.67 -0.2 4,815,803 - AO353_21980 0.67 +2.2 4,815,836 + AO353_21980 0.73 -1.2 4,815,836 + AO353_21980 0.73 -1.2 4,815,836 + AO353_21980 0.73 -0.7 4,815,836 + AO353_21980 0.73 +1.0 4,815,836 + AO353_21980 0.73 +0.8 4,815,836 + AO353_21980 0.73 -1.2 4,815,836 + AO353_21980 0.73 +0.3 4,815,836 + AO353_21980 0.73 +1.4 4,815,837 - AO353_21980 0.73 -1.2 4,815,837 - AO353_21980 0.73 +2.4 4,815,837 - AO353_21980 0.73 -1.7 4,815,837 - AO353_21980 0.73 -0.9 4,815,837 - AO353_21980 0.73 +0.8 4,815,837 - AO353_21980 0.73 -0.2 4,815,837 - AO353_21980 0.73 -0.6 4,815,837 - AO353_21980 0.73 -1.1 4,815,837 - AO353_21980 0.73 -0.2 4,815,892 + AO353_21980 0.82 -1.2 4,815,892 + AO353_21980 0.82 +0.1 4,815,892 + AO353_21980 0.82 +1.8 4,815,892 + AO353_21980 0.82 +2.2 4,815,892 + AO353_21980 0.82 -0.2 4,815,892 + AO353_21980 0.82 -1.0 4,815,892 + AO353_21980 0.82 +1.6 4,815,892 + AO353_21980 0.82 +1.2 4,815,893 - AO353_21980 0.82 +0.3 4,815,893 - AO353_21980 0.82 -2.5 4,815,893 - AO353_21980 0.82 -0.2 4,815,893 - AO353_21980 0.82 -1.2 4,815,934 + AO353_21980 0.89 +0.2 4,815,934 + AO353_21980 0.89 -1.7 4,815,935 - AO353_21980 0.89 +0.4 4,815,935 - AO353_21980 0.89 +0.6 4,815,935 - AO353_21980 0.89 -0.5 4,815,935 - AO353_21980 0.89 -0.2 4,815,982 + +0.7 4,815,982 + -0.7 4,815,983 - -2.2 4,815,983 - -1.7 4,815,983 - +1.4 4,815,983 - +2.4 4,816,007 + -0.5 4,816,007 + -0.3 4,816,007 + -0.7 4,816,007 + +0.8 4,816,008 - +1.8 4,816,008 - -0.2 4,816,057 + AO353_21985 0.19 +0.3 4,816,263 + +1.7 4,816,333 + -1.4 4,816,333 + +0.6 4,816,334 - -1.9 4,816,341 + +0.8 4,816,341 + -0.2
Or see this region's nucleotide sequence