Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21755 and AO353_21760 are separated by 144 nucleotides AO353_21760 and AO353_21765 are separated by 19 nucleotides
AO353_21755: AO353_21755 - histidine kinase, at 4,767,485 to 4,770,022
_21755
AO353_21760: AO353_21760 - twitching motility protein PilT, at 4,770,167 to 4,771,285
_21760
AO353_21765: AO353_21765 - acetoacetyl-CoA synthetase, at 4,771,305 to 4,773,260
_21765
Position (kb)
4770
4771
4772 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4769.209 kb on - strand, within AO353_21755 at 4769.209 kb on - strand, within AO353_21755 at 4769.277 kb on + strand, within AO353_21755 at 4769.278 kb on - strand, within AO353_21755 at 4769.278 kb on - strand, within AO353_21755 at 4769.355 kb on + strand, within AO353_21755 at 4769.356 kb on - strand, within AO353_21755 at 4769.428 kb on + strand, within AO353_21755 at 4769.428 kb on + strand, within AO353_21755 at 4769.640 kb on + strand, within AO353_21755 at 4769.641 kb on - strand, within AO353_21755 at 4769.707 kb on - strand, within AO353_21755 at 4769.707 kb on - strand, within AO353_21755 at 4769.726 kb on + strand, within AO353_21755 at 4769.726 kb on + strand, within AO353_21755 at 4769.738 kb on - strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.844 kb on + strand at 4769.844 kb on + strand at 4769.844 kb on + strand at 4769.845 kb on - strand at 4769.845 kb on - strand at 4770.049 kb on + strand at 4770.049 kb on + strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.053 kb on + strand at 4770.053 kb on + strand at 4770.053 kb on + strand at 4770.054 kb on - strand at 4770.054 kb on - strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.074 kb on + strand at 4770.074 kb on + strand at 4770.074 kb on + strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.186 kb on + strand at 4770.187 kb on - strand at 4770.187 kb on - strand at 4770.187 kb on - strand at 4770.187 kb on - strand at 4770.571 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.658 kb on + strand, within AO353_21760 at 4770.658 kb on + strand, within AO353_21760 at 4770.658 kb on + strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.664 kb on + strand, within AO353_21760 at 4771.045 kb on - strand, within AO353_21760 at 4771.117 kb on + strand, within AO353_21760 at 4771.192 kb on + strand at 4771.306 kb on + strand at 4771.371 kb on - strand at 4771.443 kb on + strand at 4771.443 kb on + strand at 4771.444 kb on - strand at 4771.444 kb on - strand at 4771.444 kb on - strand at 4771.444 kb on - strand at 4771.444 kb on - strand at 4771.445 kb on + strand at 4771.446 kb on - strand at 4771.491 kb on - strand at 4771.621 kb on - strand, within AO353_21765 at 4771.648 kb on + strand at 4771.648 kb on + strand, within AO353_21765 at 4771.649 kb on - strand, within AO353_21765 at 4771.649 kb on - strand, within AO353_21765 at 4771.671 kb on + strand, within AO353_21765 at 4771.689 kb on + strand, within AO353_21765 at 4771.690 kb on - strand, within AO353_21765 at 4771.690 kb on - strand, within AO353_21765 at 4771.745 kb on - strand, within AO353_21765 at 4771.745 kb on - strand, within AO353_21765 at 4771.745 kb on - strand, within AO353_21765 at 4771.783 kb on + strand, within AO353_21765 at 4771.784 kb on - strand, within AO353_21765 at 4772.053 kb on + strand, within AO353_21765 at 4772.053 kb on + strand, within AO353_21765 at 4772.054 kb on - strand, within AO353_21765 at 4772.054 kb on - strand, within AO353_21765 at 4772.054 kb on - strand, within AO353_21765 at 4772.059 kb on + strand, within AO353_21765 at 4772.059 kb on + strand, within AO353_21765 at 4772.059 kb on + strand, within AO353_21765 at 4772.255 kb on - strand, within AO353_21765 at 4772.255 kb on - strand, within AO353_21765
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,769,209 - AO353_21755 0.68 +0.4 4,769,209 - AO353_21755 0.68 -0.7 4,769,277 + AO353_21755 0.71 -0.1 4,769,278 - AO353_21755 0.71 -1.5 4,769,278 - AO353_21755 0.71 +0.4 4,769,355 + AO353_21755 0.74 +0.7 4,769,356 - AO353_21755 0.74 +0.9 4,769,428 + AO353_21755 0.77 -0.5 4,769,428 + AO353_21755 0.77 -0.4 4,769,640 + AO353_21755 0.85 -1.0 4,769,641 - AO353_21755 0.85 +0.7 4,769,707 - AO353_21755 0.88 +0.2 4,769,707 - AO353_21755 0.88 +1.4 4,769,726 + AO353_21755 0.88 +0.9 4,769,726 + AO353_21755 0.88 -0.0 4,769,738 - AO353_21755 0.89 +1.6 4,769,739 + AO353_21755 0.89 +0.1 4,769,739 + AO353_21755 0.89 -0.1 4,769,739 + AO353_21755 0.89 -0.6 4,769,739 + AO353_21755 0.89 -1.9 4,769,739 + AO353_21755 0.89 -1.3 4,769,739 + AO353_21755 0.89 +0.0 4,769,739 + AO353_21755 0.89 +0.2 4,769,740 - AO353_21755 0.89 +0.5 4,769,740 - AO353_21755 0.89 -1.4 4,769,740 - AO353_21755 0.89 -0.1 4,769,740 - AO353_21755 0.89 +0.4 4,769,740 - AO353_21755 0.89 +0.3 4,769,844 + +0.1 4,769,844 + +0.4 4,769,844 + +2.0 4,769,845 - -0.1 4,769,845 - +0.7 4,770,049 + +0.6 4,770,049 + +1.1 4,770,050 - +1.2 4,770,050 - +0.3 4,770,050 - -1.1 4,770,050 - +0.4 4,770,050 - +0.5 4,770,053 + +1.3 4,770,053 + -0.2 4,770,053 + +1.9 4,770,054 - +1.1 4,770,054 - +0.8 4,770,071 + -0.9 4,770,071 + -1.1 4,770,071 + -0.4 4,770,071 + -1.1 4,770,071 + -2.5 4,770,071 + -0.4 4,770,071 + -0.1 4,770,071 + -1.1 4,770,071 + -0.1 4,770,071 + -0.6 4,770,072 - -0.6 4,770,072 - -0.7 4,770,072 - -0.1 4,770,072 - -1.1 4,770,072 - -0.6 4,770,072 - +0.1 4,770,072 - -0.1 4,770,074 + -1.4 4,770,074 + +0.1 4,770,074 + +0.1 4,770,075 - +0.4 4,770,075 - -1.1 4,770,075 - -0.6 4,770,075 - -0.3 4,770,075 - -0.1 4,770,075 - -1.5 4,770,186 + -0.1 4,770,187 - -0.6 4,770,187 - -1.1 4,770,187 - +0.9 4,770,187 - +1.5 4,770,571 + AO353_21760 0.36 -1.5 4,770,656 + AO353_21760 0.44 -1.4 4,770,656 + AO353_21760 0.44 -0.6 4,770,656 + AO353_21760 0.44 -0.9 4,770,656 + AO353_21760 0.44 -0.7 4,770,656 + AO353_21760 0.44 -0.1 4,770,656 + AO353_21760 0.44 -1.6 4,770,657 - AO353_21760 0.44 -1.4 4,770,657 - AO353_21760 0.44 +1.9 4,770,657 - AO353_21760 0.44 -0.1 4,770,657 - AO353_21760 0.44 -1.5 4,770,657 - AO353_21760 0.44 -1.1 4,770,657 - AO353_21760 0.44 -2.1 4,770,658 + AO353_21760 0.44 +0.2 4,770,658 + AO353_21760 0.44 -0.8 4,770,658 + AO353_21760 0.44 -2.5 4,770,659 - AO353_21760 0.44 +0.9 4,770,659 - AO353_21760 0.44 +0.4 4,770,659 - AO353_21760 0.44 +0.9 4,770,659 - AO353_21760 0.44 +0.9 4,770,664 + AO353_21760 0.44 +2.4 4,771,045 - AO353_21760 0.78 -0.8 4,771,117 + AO353_21760 0.85 -1.3 4,771,192 + +1.2 4,771,306 + -1.7 4,771,371 - +0.9 4,771,443 + -0.7 4,771,443 + +0.2 4,771,444 - -0.1 4,771,444 - -1.1 4,771,444 - -0.3 4,771,444 - -2.1 4,771,444 - +0.6 4,771,445 + -1.1 4,771,446 - +1.1 4,771,491 - -1.1 4,771,621 - AO353_21765 0.16 -0.5 4,771,648 + -1.1 4,771,648 + AO353_21765 0.18 +1.2 4,771,649 - AO353_21765 0.18 -0.4 4,771,649 - AO353_21765 0.18 -0.1 4,771,671 + AO353_21765 0.19 +1.4 4,771,689 + AO353_21765 0.20 -1.4 4,771,690 - AO353_21765 0.20 +0.9 4,771,690 - AO353_21765 0.20 -0.7 4,771,745 - AO353_21765 0.22 +1.4 4,771,745 - AO353_21765 0.22 -1.0 4,771,745 - AO353_21765 0.22 -0.5 4,771,783 + AO353_21765 0.24 -1.7 4,771,784 - AO353_21765 0.24 +0.0 4,772,053 + AO353_21765 0.38 -0.7 4,772,053 + AO353_21765 0.38 -0.1 4,772,054 - AO353_21765 0.38 +0.0 4,772,054 - AO353_21765 0.38 +0.6 4,772,054 - AO353_21765 0.38 +0.4 4,772,059 + AO353_21765 0.39 -0.3 4,772,059 + AO353_21765 0.39 -3.1 4,772,059 + AO353_21765 0.39 -1.7 4,772,255 - AO353_21765 0.49 +0.7 4,772,255 - AO353_21765 0.49 -1.6
Or see this region's nucleotide sequence