Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21490 and AO353_21495 are separated by 212 nucleotides AO353_21495 and AO353_21500 are separated by 37 nucleotides
AO353_21490: AO353_21490 - 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase, at 4,702,771 to 4,703,886
_21490
AO353_21495: AO353_21495 - short-chain dehydrogenase, at 4,704,099 to 4,704,866
_21495
AO353_21500: AO353_21500 - aminoglycoside phosphotransferase, at 4,704,904 to 4,705,971
_21500
Position (kb)
4704
4705 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4703.114 kb on + strand, within AO353_21490 at 4703.115 kb on - strand, within AO353_21490 at 4703.230 kb on - strand, within AO353_21490 at 4703.230 kb on - strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.498 kb on + strand, within AO353_21490 at 4703.498 kb on + strand, within AO353_21490 at 4703.498 kb on + strand, within AO353_21490 at 4703.499 kb on - strand, within AO353_21490 at 4703.588 kb on + strand, within AO353_21490 at 4703.703 kb on + strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.863 kb on - strand at 4703.904 kb on + strand at 4703.905 kb on - strand at 4703.905 kb on - strand at 4703.905 kb on - strand at 4703.905 kb on - strand at 4704.023 kb on - strand at 4704.023 kb on - strand at 4704.036 kb on + strand at 4704.143 kb on + strand at 4704.143 kb on + strand at 4704.143 kb on + strand at 4704.143 kb on + strand at 4704.144 kb on - strand at 4704.144 kb on - strand at 4704.144 kb on - strand at 4704.145 kb on + strand at 4704.145 kb on + strand at 4704.146 kb on - strand at 4704.169 kb on + strand at 4704.169 kb on + strand at 4704.169 kb on + strand at 4704.170 kb on - strand at 4704.385 kb on + strand, within AO353_21495 at 4704.385 kb on + strand, within AO353_21495 at 4704.386 kb on - strand, within AO353_21495 at 4704.386 kb on - strand, within AO353_21495 at 4704.386 kb on - strand, within AO353_21495 at 4704.623 kb on + strand, within AO353_21495 at 4704.623 kb on + strand, within AO353_21495 at 4704.624 kb on - strand, within AO353_21495 at 4704.624 kb on - strand, within AO353_21495 at 4704.747 kb on + strand, within AO353_21495 at 4704.833 kb on + strand at 4704.834 kb on - strand at 4705.014 kb on - strand, within AO353_21500 at 4705.014 kb on - strand, within AO353_21500 at 4705.014 kb on - strand, within AO353_21500 at 4705.016 kb on + strand, within AO353_21500 at 4705.016 kb on + strand, within AO353_21500 at 4705.016 kb on + strand, within AO353_21500 at 4705.016 kb on + strand, within AO353_21500 at 4705.016 kb on + strand, within AO353_21500 at 4705.016 kb on + strand, within AO353_21500 at 4705.017 kb on - strand, within AO353_21500 at 4705.017 kb on - strand, within AO353_21500 at 4705.055 kb on + strand, within AO353_21500 at 4705.056 kb on - strand, within AO353_21500 at 4705.056 kb on - strand, within AO353_21500 at 4705.061 kb on + strand, within AO353_21500 at 4705.061 kb on + strand, within AO353_21500 at 4705.061 kb on + strand, within AO353_21500 at 4705.061 kb on + strand, within AO353_21500 at 4705.061 kb on + strand, within AO353_21500 at 4705.061 kb on + strand, within AO353_21500 at 4705.061 kb on + strand, within AO353_21500 at 4705.062 kb on - strand, within AO353_21500 at 4705.062 kb on - strand, within AO353_21500 at 4705.062 kb on - strand, within AO353_21500 at 4705.062 kb on - strand at 4705.062 kb on - strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.064 kb on + strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.065 kb on - strand, within AO353_21500 at 4705.106 kb on + strand, within AO353_21500 at 4705.106 kb on + strand, within AO353_21500 at 4705.107 kb on - strand, within AO353_21500 at 4705.107 kb on - strand at 4705.110 kb on - strand, within AO353_21500 at 4705.205 kb on + strand, within AO353_21500 at 4705.466 kb on + strand, within AO353_21500 at 4705.466 kb on + strand, within AO353_21500 at 4705.467 kb on - strand, within AO353_21500 at 4705.467 kb on - strand, within AO353_21500 at 4705.467 kb on - strand, within AO353_21500 at 4705.483 kb on + strand, within AO353_21500 at 4705.483 kb on + strand, within AO353_21500 at 4705.484 kb on - strand, within AO353_21500 at 4705.484 kb on - strand, within AO353_21500 at 4705.484 kb on - strand, within AO353_21500 at 4705.484 kb on - strand, within AO353_21500 at 4705.508 kb on + strand, within AO353_21500 at 4705.636 kb on + strand, within AO353_21500 at 4705.636 kb on + strand, within AO353_21500 at 4705.636 kb on + strand, within AO353_21500 at 4705.636 kb on + strand, within AO353_21500 at 4705.636 kb on + strand, within AO353_21500 at 4705.636 kb on + strand, within AO353_21500 at 4705.636 kb on + strand, within AO353_21500 at 4705.637 kb on - strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.640 kb on + strand, within AO353_21500 at 4705.641 kb on - strand, within AO353_21500 at 4705.641 kb on - strand, within AO353_21500 at 4705.641 kb on - strand, within AO353_21500 at 4705.641 kb on - strand, within AO353_21500 at 4705.641 kb on - strand, within AO353_21500 at 4705.682 kb on + strand, within AO353_21500 at 4705.682 kb on + strand, within AO353_21500 at 4705.683 kb on - strand, within AO353_21500 at 4705.683 kb on - strand, within AO353_21500 at 4705.789 kb on + strand, within AO353_21500 at 4705.790 kb on - strand, within AO353_21500 at 4705.790 kb on - strand, within AO353_21500 at 4705.823 kb on + strand, within AO353_21500 at 4705.823 kb on + strand, within AO353_21500 at 4705.824 kb on - strand, within AO353_21500 at 4705.824 kb on - strand, within AO353_21500
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,703,114 + AO353_21490 0.31 +0.6 4,703,115 - AO353_21490 0.31 -0.9 4,703,230 - AO353_21490 0.41 +0.6 4,703,230 - AO353_21490 0.41 -0.4 4,703,492 + AO353_21490 0.65 -0.1 4,703,492 + AO353_21490 0.65 +1.3 4,703,492 + AO353_21490 0.65 +0.3 4,703,492 + AO353_21490 0.65 -0.1 4,703,493 - AO353_21490 0.65 +1.1 4,703,493 - AO353_21490 0.65 -0.2 4,703,493 - AO353_21490 0.65 +1.0 4,703,493 - AO353_21490 0.65 +0.7 4,703,498 + AO353_21490 0.65 -0.1 4,703,498 + AO353_21490 0.65 -0.6 4,703,498 + AO353_21490 0.65 +0.5 4,703,499 - AO353_21490 0.65 -0.1 4,703,588 + AO353_21490 0.73 +0.5 4,703,703 + AO353_21490 0.84 +0.9 4,703,704 - AO353_21490 0.84 +0.5 4,703,704 - AO353_21490 0.84 +0.7 4,703,704 - AO353_21490 0.84 +1.5 4,703,704 - AO353_21490 0.84 +1.5 4,703,863 - +0.2 4,703,904 + -0.1 4,703,905 - -1.1 4,703,905 - +1.5 4,703,905 - -0.1 4,703,905 - +1.5 4,704,023 - +1.2 4,704,023 - +0.7 4,704,036 + +0.2 4,704,143 + +0.6 4,704,143 + -2.1 4,704,143 + +0.9 4,704,143 + -2.1 4,704,144 - +0.7 4,704,144 - +0.9 4,704,144 - +0.8 4,704,145 + -0.4 4,704,145 + -0.6 4,704,146 - -0.4 4,704,169 + -0.1 4,704,169 + +0.2 4,704,169 + -0.5 4,704,170 - -1.1 4,704,385 + AO353_21495 0.37 +1.7 4,704,385 + AO353_21495 0.37 +0.6 4,704,386 - AO353_21495 0.37 +0.9 4,704,386 - AO353_21495 0.37 +1.8 4,704,386 - AO353_21495 0.37 +0.6 4,704,623 + AO353_21495 0.68 +0.0 4,704,623 + AO353_21495 0.68 +1.5 4,704,624 - AO353_21495 0.68 +0.2 4,704,624 - AO353_21495 0.68 -3.1 4,704,747 + AO353_21495 0.84 -1.0 4,704,833 + +2.2 4,704,834 - +0.1 4,705,014 - AO353_21500 0.10 -0.1 4,705,014 - AO353_21500 0.10 +0.7 4,705,014 - AO353_21500 0.10 -1.1 4,705,016 + AO353_21500 0.10 +1.1 4,705,016 + AO353_21500 0.10 -0.4 4,705,016 + AO353_21500 0.10 +0.6 4,705,016 + AO353_21500 0.10 +0.3 4,705,016 + AO353_21500 0.10 -0.5 4,705,016 + AO353_21500 0.10 -0.4 4,705,017 - AO353_21500 0.11 -0.1 4,705,017 - AO353_21500 0.11 +0.5 4,705,055 + AO353_21500 0.14 +0.0 4,705,056 - AO353_21500 0.14 +1.9 4,705,056 - AO353_21500 0.14 +1.7 4,705,061 + AO353_21500 0.15 +0.9 4,705,061 + AO353_21500 0.15 -0.1 4,705,061 + AO353_21500 0.15 +1.1 4,705,061 + AO353_21500 0.15 +0.5 4,705,061 + AO353_21500 0.15 -0.1 4,705,061 + AO353_21500 0.15 +1.0 4,705,061 + AO353_21500 0.15 -0.7 4,705,062 - AO353_21500 0.15 +1.3 4,705,062 - AO353_21500 0.15 +2.1 4,705,062 - AO353_21500 0.15 -0.8 4,705,062 - -1.7 4,705,062 - AO353_21500 0.15 -0.1 4,705,064 + AO353_21500 0.15 -1.1 4,705,064 + AO353_21500 0.15 -0.9 4,705,064 + AO353_21500 0.15 +0.9 4,705,064 + AO353_21500 0.15 +0.5 4,705,064 + AO353_21500 0.15 -0.5 4,705,064 + AO353_21500 0.15 +1.1 4,705,064 + AO353_21500 0.15 -1.1 4,705,064 + AO353_21500 0.15 +0.7 4,705,064 + AO353_21500 0.15 -1.9 4,705,064 + AO353_21500 0.15 -0.6 4,705,064 + AO353_21500 0.15 -0.9 4,705,064 + AO353_21500 0.15 +0.5 4,705,065 - AO353_21500 0.15 -1.1 4,705,065 - AO353_21500 0.15 +0.9 4,705,065 - AO353_21500 0.15 -0.5 4,705,065 - AO353_21500 0.15 +0.6 4,705,065 - AO353_21500 0.15 +0.6 4,705,065 - AO353_21500 0.15 +0.5 4,705,065 - AO353_21500 0.15 +0.1 4,705,065 - AO353_21500 0.15 +1.5 4,705,106 + AO353_21500 0.19 -0.7 4,705,106 + AO353_21500 0.19 -0.1 4,705,107 - AO353_21500 0.19 -2.1 4,705,107 - -0.7 4,705,110 - AO353_21500 0.19 +0.5 4,705,205 + AO353_21500 0.28 -0.5 4,705,466 + AO353_21500 0.53 -0.1 4,705,466 + AO353_21500 0.53 -0.1 4,705,467 - AO353_21500 0.53 +0.3 4,705,467 - AO353_21500 0.53 +0.9 4,705,467 - AO353_21500 0.53 +0.0 4,705,483 + AO353_21500 0.54 -0.1 4,705,483 + AO353_21500 0.54 +0.6 4,705,484 - AO353_21500 0.54 +0.5 4,705,484 - AO353_21500 0.54 -2.0 4,705,484 - AO353_21500 0.54 +0.5 4,705,484 - AO353_21500 0.54 +1.2 4,705,508 + AO353_21500 0.57 +0.1 4,705,636 + AO353_21500 0.69 -1.1 4,705,636 + AO353_21500 0.69 -0.6 4,705,636 + AO353_21500 0.69 -1.7 4,705,636 + AO353_21500 0.69 -0.4 4,705,636 + AO353_21500 0.69 -0.1 4,705,636 + AO353_21500 0.69 -1.4 4,705,636 + AO353_21500 0.69 +1.1 4,705,637 - AO353_21500 0.69 +0.3 4,705,640 + AO353_21500 0.69 -0.1 4,705,640 + AO353_21500 0.69 -0.1 4,705,640 + AO353_21500 0.69 -0.1 4,705,640 + AO353_21500 0.69 +0.0 4,705,640 + AO353_21500 0.69 -1.3 4,705,640 + AO353_21500 0.69 +0.3 4,705,640 + AO353_21500 0.69 -1.3 4,705,640 + AO353_21500 0.69 -0.1 4,705,640 + AO353_21500 0.69 -0.7 4,705,640 + AO353_21500 0.69 -0.1 4,705,640 + AO353_21500 0.69 -0.1 4,705,640 + AO353_21500 0.69 -0.5 4,705,640 + AO353_21500 0.69 +1.1 4,705,641 - AO353_21500 0.69 +0.5 4,705,641 - AO353_21500 0.69 +0.9 4,705,641 - AO353_21500 0.69 -0.1 4,705,641 - AO353_21500 0.69 +0.8 4,705,641 - AO353_21500 0.69 +1.1 4,705,682 + AO353_21500 0.73 -0.1 4,705,682 + AO353_21500 0.73 -1.5 4,705,683 - AO353_21500 0.73 -1.3 4,705,683 - AO353_21500 0.73 +0.6 4,705,789 + AO353_21500 0.83 -0.3 4,705,790 - AO353_21500 0.83 -1.1 4,705,790 - AO353_21500 0.83 +0.7 4,705,823 + AO353_21500 0.86 -2.7 4,705,823 + AO353_21500 0.86 -1.7 4,705,824 - AO353_21500 0.86 +0.1 4,705,824 - AO353_21500 0.86 -0.1
Or see this region's nucleotide sequence