Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21485 and AO353_21490 are separated by 28 nucleotides AO353_21490 and AO353_21495 are separated by 212 nucleotides
AO353_21485: AO353_21485 - pyridine nucleotide-disulfide oxidoreductase, at 4,701,315 to 4,702,742
_21485
AO353_21490: AO353_21490 - 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase, at 4,702,771 to 4,703,886
_21490
AO353_21495: AO353_21495 - short-chain dehydrogenase, at 4,704,099 to 4,704,866
_21495
Position (kb)
4702
4703
4704 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4701.784 kb on + strand, within AO353_21485 at 4701.784 kb on + strand, within AO353_21485 at 4701.785 kb on - strand, within AO353_21485 at 4701.785 kb on - strand, within AO353_21485 at 4702.498 kb on - strand, within AO353_21485 at 4702.555 kb on + strand, within AO353_21485 at 4702.556 kb on - strand, within AO353_21485 at 4702.727 kb on - strand at 4702.727 kb on - strand at 4702.785 kb on + strand at 4702.934 kb on + strand, within AO353_21490 at 4702.935 kb on - strand, within AO353_21490 at 4703.038 kb on + strand, within AO353_21490 at 4703.039 kb on - strand, within AO353_21490 at 4703.039 kb on - strand, within AO353_21490 at 4703.039 kb on - strand, within AO353_21490 at 4703.114 kb on + strand, within AO353_21490 at 4703.115 kb on - strand, within AO353_21490 at 4703.230 kb on - strand, within AO353_21490 at 4703.230 kb on - strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.492 kb on + strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.493 kb on - strand, within AO353_21490 at 4703.498 kb on + strand, within AO353_21490 at 4703.498 kb on + strand, within AO353_21490 at 4703.498 kb on + strand, within AO353_21490 at 4703.499 kb on - strand, within AO353_21490 at 4703.588 kb on + strand, within AO353_21490 at 4703.703 kb on + strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.704 kb on - strand, within AO353_21490 at 4703.863 kb on - strand at 4703.904 kb on + strand at 4703.905 kb on - strand at 4703.905 kb on - strand at 4703.905 kb on - strand at 4703.905 kb on - strand at 4704.023 kb on - strand at 4704.023 kb on - strand at 4704.036 kb on + strand at 4704.143 kb on + strand at 4704.143 kb on + strand at 4704.143 kb on + strand at 4704.143 kb on + strand at 4704.144 kb on - strand at 4704.144 kb on - strand at 4704.144 kb on - strand at 4704.145 kb on + strand at 4704.145 kb on + strand at 4704.146 kb on - strand at 4704.169 kb on + strand at 4704.169 kb on + strand at 4704.169 kb on + strand at 4704.170 kb on - strand at 4704.385 kb on + strand, within AO353_21495 at 4704.385 kb on + strand, within AO353_21495 at 4704.386 kb on - strand, within AO353_21495 at 4704.386 kb on - strand, within AO353_21495 at 4704.386 kb on - strand, within AO353_21495 at 4704.623 kb on + strand, within AO353_21495 at 4704.623 kb on + strand, within AO353_21495 at 4704.624 kb on - strand, within AO353_21495 at 4704.624 kb on - strand, within AO353_21495 at 4704.747 kb on + strand, within AO353_21495 at 4704.833 kb on + strand at 4704.834 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,701,784 + AO353_21485 0.33 +0.5 4,701,784 + AO353_21485 0.33 +0.9 4,701,785 - AO353_21485 0.33 -1.5 4,701,785 - AO353_21485 0.33 -0.9 4,702,498 - AO353_21485 0.83 -0.8 4,702,555 + AO353_21485 0.87 -1.4 4,702,556 - AO353_21485 0.87 -0.7 4,702,727 - -0.8 4,702,727 - -0.5 4,702,785 + -1.7 4,702,934 + AO353_21490 0.15 +0.6 4,702,935 - AO353_21490 0.15 +0.1 4,703,038 + AO353_21490 0.24 +0.2 4,703,039 - AO353_21490 0.24 -0.5 4,703,039 - AO353_21490 0.24 +0.1 4,703,039 - AO353_21490 0.24 +1.5 4,703,114 + AO353_21490 0.31 +0.6 4,703,115 - AO353_21490 0.31 -0.9 4,703,230 - AO353_21490 0.41 +0.6 4,703,230 - AO353_21490 0.41 -0.4 4,703,492 + AO353_21490 0.65 -0.1 4,703,492 + AO353_21490 0.65 +1.3 4,703,492 + AO353_21490 0.65 +0.3 4,703,492 + AO353_21490 0.65 -0.1 4,703,493 - AO353_21490 0.65 +1.1 4,703,493 - AO353_21490 0.65 -0.2 4,703,493 - AO353_21490 0.65 +1.0 4,703,493 - AO353_21490 0.65 +0.7 4,703,498 + AO353_21490 0.65 -0.1 4,703,498 + AO353_21490 0.65 -0.6 4,703,498 + AO353_21490 0.65 +0.5 4,703,499 - AO353_21490 0.65 -0.1 4,703,588 + AO353_21490 0.73 +0.5 4,703,703 + AO353_21490 0.84 +0.9 4,703,704 - AO353_21490 0.84 +0.5 4,703,704 - AO353_21490 0.84 +0.7 4,703,704 - AO353_21490 0.84 +1.5 4,703,704 - AO353_21490 0.84 +1.5 4,703,863 - +0.2 4,703,904 + -0.1 4,703,905 - -1.1 4,703,905 - +1.5 4,703,905 - -0.1 4,703,905 - +1.5 4,704,023 - +1.2 4,704,023 - +0.7 4,704,036 + +0.2 4,704,143 + +0.6 4,704,143 + -2.1 4,704,143 + +0.9 4,704,143 + -2.1 4,704,144 - +0.7 4,704,144 - +0.9 4,704,144 - +0.8 4,704,145 + -0.4 4,704,145 + -0.6 4,704,146 - -0.4 4,704,169 + -0.1 4,704,169 + +0.2 4,704,169 + -0.5 4,704,170 - -1.1 4,704,385 + AO353_21495 0.37 +1.7 4,704,385 + AO353_21495 0.37 +0.6 4,704,386 - AO353_21495 0.37 +0.9 4,704,386 - AO353_21495 0.37 +1.8 4,704,386 - AO353_21495 0.37 +0.6 4,704,623 + AO353_21495 0.68 +0.0 4,704,623 + AO353_21495 0.68 +1.5 4,704,624 - AO353_21495 0.68 +0.2 4,704,624 - AO353_21495 0.68 -3.1 4,704,747 + AO353_21495 0.84 -1.0 4,704,833 + +2.2 4,704,834 - +0.1
Or see this region's nucleotide sequence