Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20185 and AO353_20190 are separated by 147 nucleotides AO353_20190 and AO353_20195 are separated by 53 nucleotides AO353_20195 and AO353_20200 are separated by 101 nucleotides AO353_20200 and AO353_20205 are separated by 272 nucleotides
AO353_20185: AO353_20185 - DNA-binding protein, at 4,435,949 to 4,438,345
_20185
AO353_20190: AO353_20190 - DNA-binding protein HU, at 4,438,493 to 4,438,765
_20190
AO353_20195: AO353_20195 - tRNA-Asp, at 4,438,819 to 4,438,895
_20195
AO353_20200: AO353_20200 - peptidylprolyl isomerase, at 4,438,997 to 4,440,856
_20200
AO353_20205: AO353_20205 - hypothetical protein, at 4,441,129 to 4,442,013
_20205
Position (kb)
4438
4439
4440
4441 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4438.054 kb on + strand, within AO353_20185 at 4438.054 kb on + strand, within AO353_20185 at 4438.287 kb on + strand at 4438.287 kb on + strand at 4438.321 kb on + strand at 4438.343 kb on + strand at 4438.343 kb on + strand at 4438.343 kb on + strand at 4438.343 kb on + strand at 4438.346 kb on + strand at 4438.346 kb on + strand at 4438.346 kb on + strand at 4438.346 kb on + strand at 4438.346 kb on + strand at 4438.346 kb on + strand at 4438.346 kb on + strand at 4438.346 kb on + strand at 4438.350 kb on + strand at 4438.350 kb on + strand at 4438.350 kb on + strand at 4438.350 kb on + strand at 4438.382 kb on + strand at 4438.382 kb on + strand at 4438.394 kb on + strand at 4438.408 kb on + strand at 4438.408 kb on + strand at 4438.408 kb on + strand at 4438.408 kb on + strand at 4438.408 kb on + strand at 4438.418 kb on + strand at 4438.473 kb on + strand at 4438.479 kb on + strand at 4438.489 kb on + strand at 4438.763 kb on + strand at 4438.763 kb on + strand at 4438.933 kb on + strand at 4439.108 kb on - strand at 4439.108 kb on - strand at 4439.116 kb on + strand at 4439.116 kb on + strand at 4439.429 kb on + strand, within AO353_20200 at 4439.429 kb on + strand, within AO353_20200 at 4439.633 kb on + strand, within AO353_20200 at 4439.633 kb on + strand, within AO353_20200 at 4439.634 kb on - strand, within AO353_20200 at 4439.636 kb on + strand, within AO353_20200 at 4439.637 kb on - strand, within AO353_20200 at 4439.979 kb on - strand, within AO353_20200 at 4440.005 kb on + strand, within AO353_20200 at 4440.005 kb on + strand, within AO353_20200 at 4440.005 kb on + strand, within AO353_20200 at 4440.852 kb on - strand at 4440.873 kb on + strand at 4440.980 kb on - strand at 4441.035 kb on + strand at 4441.036 kb on - strand at 4441.050 kb on + strand at 4441.050 kb on + strand at 4441.061 kb on - strand at 4441.061 kb on - strand at 4441.097 kb on + strand at 4441.097 kb on + strand at 4441.097 kb on + strand at 4441.098 kb on - strand at 4441.098 kb on - strand at 4441.172 kb on + strand at 4441.194 kb on + strand at 4441.194 kb on + strand at 4441.194 kb on + strand at 4441.194 kb on + strand at 4441.194 kb on + strand at 4441.194 kb on + strand at 4441.195 kb on - strand at 4441.195 kb on - strand at 4441.195 kb on - strand at 4441.195 kb on - strand at 4441.195 kb on - strand at 4441.195 kb on - strand at 4441.195 kb on - strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.213 kb on + strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.214 kb on - strand at 4441.258 kb on + strand at 4441.259 kb on - strand, within AO353_20205 at 4441.259 kb on - strand, within AO353_20205 at 4441.259 kb on - strand, within AO353_20205 at 4441.259 kb on - strand, within AO353_20205 at 4441.259 kb on - strand, within AO353_20205 at 4441.259 kb on - strand, within AO353_20205 at 4441.318 kb on + strand, within AO353_20205 at 4441.318 kb on + strand, within AO353_20205 at 4441.319 kb on - strand, within AO353_20205 at 4441.319 kb on - strand, within AO353_20205 at 4441.319 kb on - strand, within AO353_20205 at 4441.319 kb on - strand, within AO353_20205 at 4441.405 kb on - strand, within AO353_20205 at 4441.489 kb on - strand, within AO353_20205 at 4441.603 kb on + strand, within AO353_20205 at 4441.603 kb on + strand, within AO353_20205 at 4441.604 kb on - strand, within AO353_20205 at 4441.665 kb on + strand, within AO353_20205 at 4441.838 kb on + strand, within AO353_20205
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,438,054 + AO353_20185 0.88 -1.7 4,438,054 + AO353_20185 0.88 -0.5 4,438,287 + +0.4 4,438,287 + +1.2 4,438,321 + +0.4 4,438,343 + -0.6 4,438,343 + +1.9 4,438,343 + +0.3 4,438,343 + -1.1 4,438,346 + +0.9 4,438,346 + +1.3 4,438,346 + +0.5 4,438,346 + -0.3 4,438,346 + -0.8 4,438,346 + +1.5 4,438,346 + +0.1 4,438,346 + +0.2 4,438,350 + -1.5 4,438,350 + -1.7 4,438,350 + -1.7 4,438,350 + -0.7 4,438,382 + -0.1 4,438,382 + +1.5 4,438,394 + -0.7 4,438,408 + -0.5 4,438,408 + -1.1 4,438,408 + -0.1 4,438,408 + -0.1 4,438,408 + -0.5 4,438,418 + +2.2 4,438,473 + -0.1 4,438,479 + -1.1 4,438,489 + -1.1 4,438,763 + -2.0 4,438,763 + +0.6 4,438,933 + +0.2 4,439,108 - -1.4 4,439,108 - +0.5 4,439,116 + +0.9 4,439,116 + -0.1 4,439,429 + AO353_20200 0.23 +0.5 4,439,429 + AO353_20200 0.23 +0.5 4,439,633 + AO353_20200 0.34 -1.5 4,439,633 + AO353_20200 0.34 -2.0 4,439,634 - AO353_20200 0.34 +1.5 4,439,636 + AO353_20200 0.34 -1.4 4,439,637 - AO353_20200 0.34 -1.1 4,439,979 - AO353_20200 0.53 +1.7 4,440,005 + AO353_20200 0.54 -2.3 4,440,005 + AO353_20200 0.54 -0.1 4,440,005 + AO353_20200 0.54 +0.2 4,440,852 - +0.9 4,440,873 + -1.7 4,440,980 - -1.3 4,441,035 + +0.3 4,441,036 - +1.6 4,441,050 + -0.6 4,441,050 + +0.9 4,441,061 - +0.1 4,441,061 - +0.9 4,441,097 + +1.5 4,441,097 + -0.1 4,441,097 + -2.4 4,441,098 - -0.4 4,441,098 - +0.3 4,441,172 + -2.1 4,441,194 + -2.1 4,441,194 + +0.4 4,441,194 + -1.1 4,441,194 + -1.1 4,441,194 + +1.5 4,441,194 + +1.9 4,441,195 - -1.2 4,441,195 - +1.2 4,441,195 - -1.4 4,441,195 - +1.2 4,441,195 - -0.1 4,441,195 - +0.4 4,441,195 - -3.1 4,441,213 + +0.6 4,441,213 + -0.1 4,441,213 + -2.4 4,441,213 + +1.9 4,441,213 + -1.3 4,441,213 + +0.5 4,441,213 + -0.1 4,441,213 + +0.4 4,441,213 + +1.5 4,441,213 + +0.5 4,441,213 + +1.2 4,441,213 + -1.7 4,441,213 + +0.5 4,441,214 - -2.4 4,441,214 - -0.7 4,441,214 - +0.2 4,441,214 - -0.7 4,441,214 - +1.1 4,441,214 - -0.1 4,441,214 - -1.1 4,441,214 - +1.5 4,441,214 - -0.5 4,441,258 + +0.9 4,441,259 - AO353_20205 0.15 -0.5 4,441,259 - AO353_20205 0.15 -0.1 4,441,259 - AO353_20205 0.15 +0.9 4,441,259 - AO353_20205 0.15 +1.7 4,441,259 - AO353_20205 0.15 -0.1 4,441,259 - AO353_20205 0.15 +0.8 4,441,318 + AO353_20205 0.21 +1.3 4,441,318 + AO353_20205 0.21 +0.9 4,441,319 - AO353_20205 0.21 -0.8 4,441,319 - AO353_20205 0.21 -1.7 4,441,319 - AO353_20205 0.21 -0.3 4,441,319 - AO353_20205 0.21 +0.5 4,441,405 - AO353_20205 0.31 +3.4 4,441,489 - AO353_20205 0.41 -1.4 4,441,603 + AO353_20205 0.54 -0.1 4,441,603 + AO353_20205 0.54 +0.5 4,441,604 - AO353_20205 0.54 -0.1 4,441,665 + AO353_20205 0.61 -1.1 4,441,838 + AO353_20205 0.80 +1.7
Or see this region's nucleotide sequence