Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19700 and AO353_19705 overlap by 4 nucleotides AO353_19705 and AO353_19710 overlap by 4 nucleotides
AO353_19700: AO353_19700 - hypothetical protein, at 4,322,538 to 4,324,994
_19700
AO353_19705: AO353_19705 - VWA containing CoxE family protein, at 4,324,991 to 4,326,118
_19705
AO353_19710: AO353_19710 - hypothetical protein, at 4,326,115 to 4,328,181
_19710
Position (kb)
4324
4325
4326
4327 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4324.033 kb on - strand, within AO353_19700 at 4324.080 kb on + strand, within AO353_19700 at 4324.080 kb on + strand, within AO353_19700 at 4324.080 kb on + strand, within AO353_19700 at 4324.080 kb on + strand, within AO353_19700 at 4324.080 kb on + strand, within AO353_19700 at 4324.081 kb on - strand, within AO353_19700 at 4324.371 kb on - strand, within AO353_19700 at 4324.371 kb on - strand, within AO353_19700 at 4324.392 kb on + strand, within AO353_19700 at 4324.392 kb on + strand, within AO353_19700 at 4324.392 kb on + strand, within AO353_19700 at 4324.392 kb on + strand, within AO353_19700 at 4324.392 kb on + strand, within AO353_19700 at 4324.392 kb on + strand, within AO353_19700 at 4324.393 kb on - strand, within AO353_19700 at 4324.506 kb on + strand, within AO353_19700 at 4324.506 kb on + strand, within AO353_19700 at 4324.506 kb on + strand, within AO353_19700 at 4324.507 kb on - strand at 4324.507 kb on - strand, within AO353_19700 at 4324.578 kb on + strand, within AO353_19700 at 4324.579 kb on - strand, within AO353_19700 at 4324.579 kb on - strand, within AO353_19700 at 4324.668 kb on + strand, within AO353_19700 at 4324.668 kb on + strand, within AO353_19700 at 4324.727 kb on - strand, within AO353_19700 at 4324.835 kb on + strand at 4324.835 kb on + strand at 4324.836 kb on - strand at 4324.836 kb on - strand at 4324.836 kb on - strand at 4324.837 kb on + strand at 4324.837 kb on + strand at 4324.837 kb on + strand at 4324.837 kb on + strand at 4324.838 kb on - strand at 4324.838 kb on - strand at 4325.030 kb on + strand at 4325.030 kb on + strand at 4325.031 kb on - strand at 4325.031 kb on - strand at 4325.031 kb on - strand at 4325.031 kb on - strand at 4325.031 kb on - strand at 4325.031 kb on - strand at 4325.031 kb on - strand at 4325.038 kb on + strand at 4325.038 kb on + strand at 4325.039 kb on - strand at 4325.039 kb on - strand at 4325.111 kb on + strand, within AO353_19705 at 4325.111 kb on + strand, within AO353_19705 at 4325.117 kb on + strand, within AO353_19705 at 4325.117 kb on + strand, within AO353_19705 at 4325.129 kb on + strand, within AO353_19705 at 4325.129 kb on + strand, within AO353_19705 at 4325.130 kb on - strand, within AO353_19705 at 4325.145 kb on + strand, within AO353_19705 at 4325.555 kb on + strand, within AO353_19705 at 4325.556 kb on - strand, within AO353_19705 at 4325.556 kb on - strand, within AO353_19705 at 4325.909 kb on + strand, within AO353_19705 at 4325.909 kb on + strand, within AO353_19705 at 4325.909 kb on + strand, within AO353_19705 at 4325.910 kb on - strand, within AO353_19705 at 4325.910 kb on - strand, within AO353_19705 at 4325.910 kb on - strand, within AO353_19705 at 4325.910 kb on - strand, within AO353_19705 at 4325.910 kb on - strand, within AO353_19705 at 4326.018 kb on - strand at 4326.209 kb on - strand at 4326.634 kb on + strand, within AO353_19710 at 4326.634 kb on + strand, within AO353_19710 at 4326.635 kb on - strand, within AO353_19710 at 4326.635 kb on - strand, within AO353_19710 at 4326.635 kb on - strand, within AO353_19710 at 4326.635 kb on - strand, within AO353_19710 at 4326.635 kb on - strand, within AO353_19710 at 4326.635 kb on - strand, within AO353_19710 at 4326.635 kb on - strand, within AO353_19710 at 4326.636 kb on + strand, within AO353_19710 at 4326.636 kb on + strand, within AO353_19710 at 4326.636 kb on + strand, within AO353_19710 at 4326.637 kb on - strand, within AO353_19710 at 4326.694 kb on + strand, within AO353_19710 at 4326.695 kb on - strand, within AO353_19710 at 4326.898 kb on + strand, within AO353_19710 at 4326.898 kb on + strand, within AO353_19710 at 4326.899 kb on - strand, within AO353_19710 at 4326.899 kb on - strand, within AO353_19710 at 4327.045 kb on + strand, within AO353_19710 at 4327.045 kb on + strand, within AO353_19710 at 4327.045 kb on + strand, within AO353_19710 at 4327.046 kb on - strand, within AO353_19710 at 4327.046 kb on - strand, within AO353_19710
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,324,033 - AO353_19700 0.61 -1.3 4,324,080 + AO353_19700 0.63 +1.1 4,324,080 + AO353_19700 0.63 -0.7 4,324,080 + AO353_19700 0.63 -0.9 4,324,080 + AO353_19700 0.63 -1.1 4,324,080 + AO353_19700 0.63 -0.5 4,324,081 - AO353_19700 0.63 +0.5 4,324,371 - AO353_19700 0.75 -0.1 4,324,371 - AO353_19700 0.75 -0.1 4,324,392 + AO353_19700 0.75 +1.7 4,324,392 + AO353_19700 0.75 -0.1 4,324,392 + AO353_19700 0.75 +1.2 4,324,392 + AO353_19700 0.75 +1.9 4,324,392 + AO353_19700 0.75 -0.4 4,324,392 + AO353_19700 0.75 +0.5 4,324,393 - AO353_19700 0.75 +0.8 4,324,506 + AO353_19700 0.80 -0.6 4,324,506 + AO353_19700 0.80 +1.5 4,324,506 + AO353_19700 0.80 -0.1 4,324,507 - -0.5 4,324,507 - AO353_19700 0.80 -0.1 4,324,578 + AO353_19700 0.83 -0.1 4,324,579 - AO353_19700 0.83 -1.1 4,324,579 - AO353_19700 0.83 -0.3 4,324,668 + AO353_19700 0.87 -0.1 4,324,668 + AO353_19700 0.87 -1.1 4,324,727 - AO353_19700 0.89 -0.8 4,324,835 + -0.3 4,324,835 + -1.1 4,324,836 - +1.8 4,324,836 - -0.5 4,324,836 - -0.1 4,324,837 + -0.1 4,324,837 + +0.9 4,324,837 + -0.5 4,324,837 + +0.8 4,324,838 - +0.7 4,324,838 - +0.4 4,325,030 + -1.4 4,325,030 + -1.7 4,325,031 - +1.5 4,325,031 - -1.9 4,325,031 - -1.7 4,325,031 - -0.6 4,325,031 - +2.7 4,325,031 - -1.3 4,325,031 - -0.6 4,325,038 + +0.9 4,325,038 + -0.3 4,325,039 - -1.1 4,325,039 - -0.5 4,325,111 + AO353_19705 0.11 +0.9 4,325,111 + AO353_19705 0.11 +0.7 4,325,117 + AO353_19705 0.11 +1.1 4,325,117 + AO353_19705 0.11 +1.8 4,325,129 + AO353_19705 0.12 -0.7 4,325,129 + AO353_19705 0.12 -1.1 4,325,130 - AO353_19705 0.12 +0.1 4,325,145 + AO353_19705 0.14 -0.4 4,325,555 + AO353_19705 0.50 +0.7 4,325,556 - AO353_19705 0.50 -1.4 4,325,556 - AO353_19705 0.50 +0.8 4,325,909 + AO353_19705 0.81 -0.1 4,325,909 + AO353_19705 0.81 +0.9 4,325,909 + AO353_19705 0.81 +0.7 4,325,910 - AO353_19705 0.81 +0.8 4,325,910 - AO353_19705 0.81 +0.8 4,325,910 - AO353_19705 0.81 -1.4 4,325,910 - AO353_19705 0.81 -0.9 4,325,910 - AO353_19705 0.81 +0.5 4,326,018 - -1.9 4,326,209 - -1.9 4,326,634 + AO353_19710 0.25 -0.1 4,326,634 + AO353_19710 0.25 -1.7 4,326,635 - AO353_19710 0.25 +1.1 4,326,635 - AO353_19710 0.25 +0.5 4,326,635 - AO353_19710 0.25 -2.4 4,326,635 - AO353_19710 0.25 +0.3 4,326,635 - AO353_19710 0.25 +0.9 4,326,635 - AO353_19710 0.25 -0.1 4,326,635 - AO353_19710 0.25 -0.4 4,326,636 + AO353_19710 0.25 +0.6 4,326,636 + AO353_19710 0.25 -0.6 4,326,636 + AO353_19710 0.25 +0.3 4,326,637 - AO353_19710 0.25 +3.5 4,326,694 + AO353_19710 0.28 +0.0 4,326,695 - AO353_19710 0.28 +0.1 4,326,898 + AO353_19710 0.38 -1.1 4,326,898 + AO353_19710 0.38 +0.5 4,326,899 - AO353_19710 0.38 -2.1 4,326,899 - AO353_19710 0.38 +2.1 4,327,045 + AO353_19710 0.45 -0.7 4,327,045 + AO353_19710 0.45 -0.4 4,327,045 + AO353_19710 0.45 +1.0 4,327,046 - AO353_19710 0.45 -1.1 4,327,046 - AO353_19710 0.45 -0.1
Or see this region's nucleotide sequence