Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18740 and AO353_18745 overlap by 1 nucleotides AO353_18745 and AO353_18750 are separated by 24 nucleotides AO353_18750 and AO353_18755 are separated by 3 nucleotides AO353_18755 and AO353_18760 are separated by 3 nucleotides
AO353_18740: AO353_18740 - flagellar assembly protein FliO, at 4,122,212 to 4,122,643
_18740
AO353_18745: AO353_18745 - flagellar biosynthesis protein flip, at 4,122,643 to 4,123,392
_18745
AO353_18750: AO353_18750 - flagellar biosynthetic protein FliQ, at 4,123,417 to 4,123,686
_18750
AO353_18755: AO353_18755 - flagellar biosynthetic protein FliR, at 4,123,690 to 4,124,472
_18755
AO353_18760: AO353_18760 - flagellar biosynthetic protein FlhB, at 4,124,476 to 4,125,615
_18760
Position (kb)
4123
4124 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4122.628 kb on + strand at 4122.628 kb on + strand at 4122.629 kb on - strand at 4122.634 kb on + strand at 4122.634 kb on + strand at 4122.641 kb on + strand at 4122.641 kb on + strand at 4122.641 kb on + strand at 4122.641 kb on + strand at 4122.641 kb on + strand at 4122.641 kb on + strand at 4122.641 kb on + strand at 4122.642 kb on - strand at 4122.642 kb on - strand at 4122.642 kb on - strand at 4122.642 kb on - strand at 4122.642 kb on - strand at 4122.763 kb on + strand, within AO353_18745 at 4122.764 kb on - strand, within AO353_18745 at 4122.997 kb on + strand, within AO353_18745 at 4122.997 kb on + strand, within AO353_18745 at 4122.997 kb on + strand, within AO353_18745 at 4123.390 kb on + strand at 4123.391 kb on - strand at 4123.396 kb on + strand at 4123.396 kb on + strand at 4123.396 kb on + strand at 4123.396 kb on + strand at 4123.396 kb on + strand at 4123.396 kb on + strand at 4123.396 kb on + strand at 4123.396 kb on + strand at 4123.397 kb on - strand at 4123.397 kb on - strand at 4123.397 kb on - strand at 4123.397 kb on - strand at 4123.397 kb on - strand at 4123.397 kb on - strand at 4123.397 kb on - strand at 4123.397 kb on - strand at 4123.436 kb on + strand at 4123.436 kb on + strand at 4123.484 kb on + strand, within AO353_18750 at 4123.625 kb on + strand, within AO353_18750 at 4123.625 kb on + strand, within AO353_18750 at 4123.625 kb on + strand, within AO353_18750 at 4123.626 kb on - strand, within AO353_18750 at 4123.626 kb on - strand, within AO353_18750 at 4123.626 kb on - strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.642 kb on + strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.643 kb on - strand, within AO353_18750 at 4123.657 kb on + strand, within AO353_18750 at 4123.657 kb on + strand, within AO353_18750 at 4123.658 kb on - strand, within AO353_18750 at 4123.658 kb on - strand, within AO353_18750 at 4123.658 kb on - strand, within AO353_18750 at 4123.658 kb on - strand, within AO353_18750 at 4123.685 kb on - strand at 4123.725 kb on + strand at 4123.726 kb on - strand at 4123.818 kb on + strand, within AO353_18755 at 4123.819 kb on - strand, within AO353_18755 at 4123.819 kb on - strand, within AO353_18755 at 4123.829 kb on - strand, within AO353_18755 at 4123.829 kb on - strand, within AO353_18755 at 4123.829 kb on - strand, within AO353_18755 at 4123.829 kb on - strand, within AO353_18755 at 4123.829 kb on - strand, within AO353_18755 at 4123.931 kb on + strand, within AO353_18755 at 4123.931 kb on + strand, within AO353_18755 at 4123.931 kb on + strand, within AO353_18755 at 4123.931 kb on + strand, within AO353_18755 at 4123.931 kb on + strand, within AO353_18755 at 4123.932 kb on - strand, within AO353_18755 at 4123.932 kb on - strand, within AO353_18755 at 4123.932 kb on - strand, within AO353_18755 at 4124.249 kb on + strand, within AO353_18755 at 4124.250 kb on - strand, within AO353_18755 at 4124.250 kb on - strand, within AO353_18755 at 4124.331 kb on + strand, within AO353_18755 at 4124.332 kb on - strand, within AO353_18755 at 4124.332 kb on - strand, within AO353_18755 at 4124.413 kb on + strand at 4124.454 kb on + strand at 4124.455 kb on - strand at 4124.455 kb on - strand at 4124.580 kb on + strand at 4124.580 kb on + strand at 4124.580 kb on + strand at 4124.581 kb on - strand at 4124.581 kb on - strand at 4124.581 kb on - strand at 4124.581 kb on - strand at 4124.581 kb on - strand at 4124.623 kb on + strand, within AO353_18760
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,122,628 + -0.4 4,122,628 + -0.3 4,122,629 - -1.1 4,122,634 + -0.4 4,122,634 + +0.4 4,122,641 + +0.3 4,122,641 + -1.1 4,122,641 + +0.1 4,122,641 + -0.6 4,122,641 + -1.1 4,122,641 + -1.6 4,122,641 + +3.4 4,122,642 - -0.1 4,122,642 - -0.6 4,122,642 - -0.5 4,122,642 - -1.2 4,122,642 - -1.6 4,122,763 + AO353_18745 0.16 -3.2 4,122,764 - AO353_18745 0.16 -0.1 4,122,997 + AO353_18745 0.47 -3.1 4,122,997 + AO353_18745 0.47 -2.9 4,122,997 + AO353_18745 0.47 -0.5 4,123,390 + -0.1 4,123,391 - -0.1 4,123,396 + +0.7 4,123,396 + +0.3 4,123,396 + +1.5 4,123,396 + -0.1 4,123,396 + -0.8 4,123,396 + -1.1 4,123,396 + -0.9 4,123,396 + -0.1 4,123,397 - +0.4 4,123,397 - +1.5 4,123,397 - +0.9 4,123,397 - -0.2 4,123,397 - -2.3 4,123,397 - +0.7 4,123,397 - -0.1 4,123,397 - -0.7 4,123,436 + -1.1 4,123,436 + +1.1 4,123,484 + AO353_18750 0.25 +0.4 4,123,625 + AO353_18750 0.77 +1.5 4,123,625 + AO353_18750 0.77 +0.5 4,123,625 + AO353_18750 0.77 -0.6 4,123,626 - AO353_18750 0.77 -1.9 4,123,626 - AO353_18750 0.77 +0.9 4,123,626 - AO353_18750 0.77 -1.1 4,123,642 + AO353_18750 0.83 +1.1 4,123,642 + AO353_18750 0.83 -1.1 4,123,642 + AO353_18750 0.83 -0.1 4,123,642 + AO353_18750 0.83 +0.9 4,123,642 + AO353_18750 0.83 +1.9 4,123,642 + AO353_18750 0.83 -0.6 4,123,642 + AO353_18750 0.83 -0.6 4,123,642 + AO353_18750 0.83 +1.2 4,123,643 - AO353_18750 0.84 -0.1 4,123,643 - AO353_18750 0.84 -0.4 4,123,643 - AO353_18750 0.84 +1.3 4,123,643 - AO353_18750 0.84 -3.5 4,123,643 - AO353_18750 0.84 -2.6 4,123,643 - AO353_18750 0.84 -0.4 4,123,643 - AO353_18750 0.84 -0.6 4,123,643 - AO353_18750 0.84 +0.9 4,123,657 + AO353_18750 0.89 +0.8 4,123,657 + AO353_18750 0.89 +0.7 4,123,658 - AO353_18750 0.89 +1.5 4,123,658 - AO353_18750 0.89 +0.8 4,123,658 - AO353_18750 0.89 +1.9 4,123,658 - AO353_18750 0.89 +0.7 4,123,685 - +0.6 4,123,725 + -0.5 4,123,726 - +0.8 4,123,818 + AO353_18755 0.16 +0.4 4,123,819 - AO353_18755 0.16 -0.1 4,123,819 - AO353_18755 0.16 -0.1 4,123,829 - AO353_18755 0.18 -0.5 4,123,829 - AO353_18755 0.18 +0.1 4,123,829 - AO353_18755 0.18 -1.6 4,123,829 - AO353_18755 0.18 -0.3 4,123,829 - AO353_18755 0.18 -0.1 4,123,931 + AO353_18755 0.31 -0.8 4,123,931 + AO353_18755 0.31 +0.2 4,123,931 + AO353_18755 0.31 -0.6 4,123,931 + AO353_18755 0.31 -0.1 4,123,931 + AO353_18755 0.31 -0.7 4,123,932 - AO353_18755 0.31 -0.1 4,123,932 - AO353_18755 0.31 +1.9 4,123,932 - AO353_18755 0.31 +0.4 4,124,249 + AO353_18755 0.71 -0.8 4,124,250 - AO353_18755 0.72 -0.1 4,124,250 - AO353_18755 0.72 -1.1 4,124,331 + AO353_18755 0.82 +0.4 4,124,332 - AO353_18755 0.82 -1.2 4,124,332 - AO353_18755 0.82 -0.1 4,124,413 + -0.1 4,124,454 + -1.9 4,124,455 - -1.1 4,124,455 - -2.1 4,124,580 + -1.6 4,124,580 + +1.4 4,124,580 + +0.5 4,124,581 - -1.1 4,124,581 - +0.4 4,124,581 - +0.6 4,124,581 - +0.4 4,124,581 - +0.3 4,124,623 + AO353_18760 0.13 -1.1
Or see this region's nucleotide sequence