Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18660 and AO353_18665 are separated by 110 nucleotides AO353_18665 and AO353_18670 overlap by 1 nucleotides
AO353_18660: AO353_18660 - AAA family ATPase, at 4,105,756 to 4,107,231
_18660
AO353_18665: AO353_18665 - histidine kinase, at 4,107,342 to 4,108,559
_18665
AO353_18670: AO353_18670 - Fis family transcriptional regulator, at 4,108,559 to 4,109,959
_18670
Position (kb)
4107
4108
4109 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4106.537 kb on + strand, within AO353_18660 at 4106.537 kb on + strand, within AO353_18660 at 4106.538 kb on - strand, within AO353_18660 at 4106.538 kb on - strand, within AO353_18660 at 4106.538 kb on - strand, within AO353_18660 at 4106.538 kb on - strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.665 kb on + strand, within AO353_18660 at 4106.666 kb on - strand, within AO353_18660 at 4106.666 kb on - strand, within AO353_18660 at 4106.666 kb on - strand, within AO353_18660 at 4106.666 kb on - strand, within AO353_18660 at 4106.668 kb on + strand, within AO353_18660 at 4106.669 kb on - strand, within AO353_18660 at 4106.725 kb on - strand, within AO353_18660 at 4106.929 kb on + strand, within AO353_18660 at 4106.929 kb on + strand, within AO353_18660 at 4106.929 kb on + strand, within AO353_18660 at 4106.961 kb on + strand, within AO353_18660 at 4106.961 kb on + strand, within AO353_18660 at 4107.064 kb on + strand, within AO353_18660 at 4107.064 kb on + strand, within AO353_18660 at 4107.065 kb on - strand, within AO353_18660 at 4107.159 kb on + strand at 4107.160 kb on - strand at 4107.187 kb on + strand at 4107.187 kb on + strand at 4107.187 kb on + strand at 4107.188 kb on - strand at 4107.188 kb on - strand at 4107.288 kb on + strand at 4107.288 kb on + strand at 4107.312 kb on - strand at 4107.400 kb on + strand at 4107.400 kb on + strand at 4107.400 kb on + strand at 4107.400 kb on + strand at 4107.401 kb on - strand at 4107.477 kb on + strand, within AO353_18665 at 4107.477 kb on + strand, within AO353_18665 at 4107.477 kb on + strand, within AO353_18665 at 4107.477 kb on + strand, within AO353_18665 at 4107.477 kb on + strand, within AO353_18665 at 4107.477 kb on + strand, within AO353_18665 at 4107.477 kb on + strand, within AO353_18665 at 4107.478 kb on - strand, within AO353_18665 at 4107.478 kb on - strand, within AO353_18665 at 4107.478 kb on - strand, within AO353_18665 at 4107.478 kb on - strand, within AO353_18665 at 4107.478 kb on - strand, within AO353_18665 at 4107.834 kb on - strand, within AO353_18665 at 4107.834 kb on - strand, within AO353_18665 at 4107.960 kb on + strand, within AO353_18665 at 4107.960 kb on + strand, within AO353_18665 at 4107.960 kb on + strand, within AO353_18665 at 4107.960 kb on + strand, within AO353_18665 at 4107.960 kb on + strand, within AO353_18665 at 4107.960 kb on + strand, within AO353_18665 at 4107.961 kb on - strand, within AO353_18665 at 4107.961 kb on - strand, within AO353_18665 at 4107.961 kb on - strand, within AO353_18665 at 4107.961 kb on - strand, within AO353_18665 at 4107.961 kb on - strand, within AO353_18665 at 4108.214 kb on + strand, within AO353_18665 at 4108.215 kb on - strand, within AO353_18665 at 4108.215 kb on - strand, within AO353_18665 at 4108.215 kb on - strand, within AO353_18665 at 4108.305 kb on + strand, within AO353_18665 at 4108.305 kb on + strand, within AO353_18665 at 4108.305 kb on + strand, within AO353_18665 at 4108.305 kb on + strand, within AO353_18665 at 4108.306 kb on - strand, within AO353_18665 at 4108.306 kb on - strand, within AO353_18665 at 4108.306 kb on - strand, within AO353_18665 at 4108.306 kb on - strand, within AO353_18665 at 4108.306 kb on - strand, within AO353_18665 at 4108.306 kb on - strand, within AO353_18665 at 4108.404 kb on - strand, within AO353_18665 at 4108.404 kb on - strand, within AO353_18665 at 4108.435 kb on + strand, within AO353_18665 at 4108.435 kb on + strand, within AO353_18665 at 4108.575 kb on + strand at 4108.575 kb on + strand at 4108.575 kb on + strand at 4108.618 kb on + strand at 4108.643 kb on + strand at 4108.643 kb on + strand at 4108.643 kb on + strand at 4108.643 kb on + strand at 4108.644 kb on - strand at 4108.857 kb on - strand, within AO353_18670 at 4108.857 kb on - strand at 4108.857 kb on - strand, within AO353_18670 at 4108.857 kb on - strand, within AO353_18670 at 4109.066 kb on + strand, within AO353_18670 at 4109.067 kb on - strand, within AO353_18670 at 4109.067 kb on - strand, within AO353_18670 at 4109.067 kb on - strand, within AO353_18670 at 4109.188 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.421 kb on - strand, within AO353_18670 at 4109.423 kb on + strand, within AO353_18670 at 4109.521 kb on + strand, within AO353_18670 at 4109.521 kb on + strand, within AO353_18670 at 4109.521 kb on + strand, within AO353_18670 at 4109.522 kb on - strand, within AO353_18670 at 4109.522 kb on - strand, within AO353_18670
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 4,106,537 + AO353_18660 0.53 -0.6 4,106,537 + AO353_18660 0.53 +2.5 4,106,538 - AO353_18660 0.53 +0.2 4,106,538 - AO353_18660 0.53 -0.8 4,106,538 - AO353_18660 0.53 -0.1 4,106,538 - AO353_18660 0.53 +0.4 4,106,665 + AO353_18660 0.62 +1.1 4,106,665 + AO353_18660 0.62 -1.1 4,106,665 + AO353_18660 0.62 +0.4 4,106,665 + AO353_18660 0.62 -0.9 4,106,665 + AO353_18660 0.62 -0.1 4,106,665 + AO353_18660 0.62 -0.9 4,106,665 + AO353_18660 0.62 -0.7 4,106,665 + AO353_18660 0.62 +2.3 4,106,665 + AO353_18660 0.62 -2.6 4,106,665 + AO353_18660 0.62 +2.3 4,106,665 + AO353_18660 0.62 -2.1 4,106,666 - AO353_18660 0.62 +0.4 4,106,666 - AO353_18660 0.62 +0.3 4,106,666 - AO353_18660 0.62 +1.2 4,106,666 - AO353_18660 0.62 -1.1 4,106,668 + AO353_18660 0.62 -1.4 4,106,669 - AO353_18660 0.62 -0.2 4,106,725 - AO353_18660 0.66 +0.4 4,106,929 + AO353_18660 0.79 +0.9 4,106,929 + AO353_18660 0.79 -0.1 4,106,929 + AO353_18660 0.79 -1.1 4,106,961 + AO353_18660 0.82 +1.4 4,106,961 + AO353_18660 0.82 -1.1 4,107,064 + AO353_18660 0.89 +1.8 4,107,064 + AO353_18660 0.89 -1.6 4,107,065 - AO353_18660 0.89 -0.5 4,107,159 + -0.1 4,107,160 - -1.1 4,107,187 + -1.6 4,107,187 + +0.2 4,107,187 + -0.3 4,107,188 - -1.1 4,107,188 - +0.4 4,107,288 + -0.3 4,107,288 + +1.3 4,107,312 - +0.7 4,107,400 + -0.2 4,107,400 + -0.3 4,107,400 + +1.8 4,107,400 + -0.4 4,107,401 - -0.6 4,107,477 + AO353_18665 0.11 +1.0 4,107,477 + AO353_18665 0.11 +0.7 4,107,477 + AO353_18665 0.11 -1.6 4,107,477 + AO353_18665 0.11 +1.1 4,107,477 + AO353_18665 0.11 -1.6 4,107,477 + AO353_18665 0.11 +0.5 4,107,477 + AO353_18665 0.11 +0.4 4,107,478 - AO353_18665 0.11 -0.1 4,107,478 - AO353_18665 0.11 +0.9 4,107,478 - AO353_18665 0.11 +1.3 4,107,478 - AO353_18665 0.11 -1.9 4,107,478 - AO353_18665 0.11 -0.8 4,107,834 - AO353_18665 0.40 +0.5 4,107,834 - AO353_18665 0.40 +1.3 4,107,960 + AO353_18665 0.51 +1.5 4,107,960 + AO353_18665 0.51 -1.2 4,107,960 + AO353_18665 0.51 +0.5 4,107,960 + AO353_18665 0.51 +0.5 4,107,960 + AO353_18665 0.51 -2.1 4,107,960 + AO353_18665 0.51 -0.4 4,107,961 - AO353_18665 0.51 -0.3 4,107,961 - AO353_18665 0.51 +1.9 4,107,961 - AO353_18665 0.51 +0.7 4,107,961 - AO353_18665 0.51 +0.7 4,107,961 - AO353_18665 0.51 +0.9 4,108,214 + AO353_18665 0.72 +1.5 4,108,215 - AO353_18665 0.72 -0.5 4,108,215 - AO353_18665 0.72 -0.1 4,108,215 - AO353_18665 0.72 +2.3 4,108,305 + AO353_18665 0.79 +0.2 4,108,305 + AO353_18665 0.79 -1.8 4,108,305 + AO353_18665 0.79 -1.4 4,108,305 + AO353_18665 0.79 -1.1 4,108,306 - AO353_18665 0.79 +0.6 4,108,306 - AO353_18665 0.79 -0.5 4,108,306 - AO353_18665 0.79 +0.4 4,108,306 - AO353_18665 0.79 +1.2 4,108,306 - AO353_18665 0.79 +0.7 4,108,306 - AO353_18665 0.79 -1.1 4,108,404 - AO353_18665 0.87 +1.5 4,108,404 - AO353_18665 0.87 +0.2 4,108,435 + AO353_18665 0.90 -0.3 4,108,435 + AO353_18665 0.90 +2.5 4,108,575 + -0.6 4,108,575 + +0.5 4,108,575 + -2.1 4,108,618 + -1.6 4,108,643 + -0.1 4,108,643 + +1.8 4,108,643 + +1.1 4,108,643 + -0.5 4,108,644 - -2.1 4,108,857 - AO353_18670 0.21 -0.1 4,108,857 - +1.5 4,108,857 - AO353_18670 0.21 -1.1 4,108,857 - AO353_18670 0.21 -0.4 4,109,066 + AO353_18670 0.36 -0.1 4,109,067 - AO353_18670 0.36 -1.1 4,109,067 - AO353_18670 0.36 -0.3 4,109,067 - AO353_18670 0.36 -0.1 4,109,188 + AO353_18670 0.45 +0.4 4,109,420 + AO353_18670 0.61 -1.1 4,109,420 + AO353_18670 0.61 +2.3 4,109,420 + AO353_18670 0.61 -1.1 4,109,420 + AO353_18670 0.61 -0.6 4,109,420 + AO353_18670 0.61 +0.4 4,109,420 + AO353_18670 0.61 +0.7 4,109,420 + AO353_18670 0.61 +0.0 4,109,421 - AO353_18670 0.62 +0.3 4,109,423 + AO353_18670 0.62 -0.1 4,109,521 + AO353_18670 0.69 +1.1 4,109,521 + AO353_18670 0.69 -0.2 4,109,521 + AO353_18670 0.69 +0.1 4,109,522 - AO353_18670 0.69 -0.5 4,109,522 - AO353_18670 0.69 +0.2
Or see this region's nucleotide sequence