Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10085 and AO353_10090 are separated by 115 nucleotides AO353_10090 and AO353_10095 are separated by 13 nucleotides
AO353_10085: AO353_10085 - pyridoxamine kinase, at 2,209,866 to 2,210,738
_10085
AO353_10090: AO353_10090 - hypothetical protein, at 2,210,854 to 2,211,252
_10090
AO353_10095: AO353_10095 - cobalamin biosynthesis protein CobW, at 2,211,266 to 2,212,237
_10095
Position (kb)
2210
2211
2212 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2209.867 kb on + strand at 2209.867 kb on + strand at 2209.867 kb on + strand at 2209.867 kb on + strand at 2209.867 kb on + strand at 2209.867 kb on + strand at 2209.868 kb on - strand at 2209.868 kb on - strand at 2209.868 kb on - strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.945 kb on + strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2209.946 kb on - strand at 2210.361 kb on + strand, within AO353_10085 at 2210.407 kb on + strand, within AO353_10085 at 2210.407 kb on + strand, within AO353_10085 at 2210.407 kb on + strand, within AO353_10085 at 2210.407 kb on + strand, within AO353_10085 at 2210.407 kb on + strand, within AO353_10085 at 2210.407 kb on + strand, within AO353_10085 at 2210.408 kb on - strand, within AO353_10085 at 2210.408 kb on - strand, within AO353_10085 at 2210.621 kb on + strand, within AO353_10085 at 2210.622 kb on - strand, within AO353_10085 at 2210.729 kb on + strand at 2210.729 kb on + strand at 2210.729 kb on + strand at 2210.729 kb on + strand at 2210.729 kb on + strand at 2210.729 kb on + strand at 2210.729 kb on + strand at 2210.729 kb on + strand at 2210.730 kb on - strand at 2210.730 kb on - strand at 2210.730 kb on - strand at 2210.730 kb on - strand at 2210.730 kb on - strand at 2210.779 kb on + strand at 2210.780 kb on - strand at 2210.780 kb on - strand at 2210.788 kb on - strand at 2210.800 kb on + strand at 2210.800 kb on + strand at 2210.801 kb on - strand at 2210.801 kb on - strand at 2210.822 kb on + strand at 2210.822 kb on + strand at 2210.822 kb on + strand at 2210.822 kb on + strand at 2210.822 kb on + strand at 2210.822 kb on + strand at 2210.822 kb on + strand at 2210.823 kb on - strand at 2210.823 kb on - strand at 2210.823 kb on - strand at 2210.823 kb on - strand at 2210.823 kb on - strand at 2210.823 kb on - strand at 2210.823 kb on - strand at 2210.823 kb on - strand at 2210.830 kb on + strand at 2210.830 kb on + strand at 2210.830 kb on + strand at 2210.830 kb on + strand at 2210.831 kb on - strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.833 kb on + strand at 2210.834 kb on - strand at 2210.834 kb on - strand at 2210.834 kb on - strand at 2210.834 kb on - strand at 2210.834 kb on - strand at 2210.834 kb on - strand at 2210.834 kb on - strand at 2210.871 kb on + strand at 2210.871 kb on + strand at 2210.871 kb on + strand at 2210.871 kb on + strand at 2210.871 kb on + strand at 2210.871 kb on + strand at 2210.872 kb on - strand at 2210.872 kb on - strand at 2211.064 kb on + strand, within AO353_10090 at 2211.064 kb on + strand, within AO353_10090 at 2211.064 kb on + strand, within AO353_10090 at 2211.065 kb on - strand, within AO353_10090 at 2211.065 kb on - strand, within AO353_10090 at 2211.065 kb on - strand, within AO353_10090 at 2211.065 kb on - strand, within AO353_10090 at 2211.065 kb on - strand, within AO353_10090 at 2211.066 kb on + strand, within AO353_10090 at 2211.066 kb on + strand, within AO353_10090 at 2211.066 kb on + strand, within AO353_10090 at 2211.066 kb on + strand, within AO353_10090 at 2211.067 kb on - strand, within AO353_10090 at 2211.067 kb on - strand, within AO353_10090 at 2211.067 kb on - strand, within AO353_10090 at 2211.067 kb on - strand, within AO353_10090 at 2211.158 kb on - strand, within AO353_10090 at 2211.267 kb on + strand at 2211.267 kb on + strand at 2211.628 kb on + strand, within AO353_10095 at 2211.628 kb on + strand, within AO353_10095 at 2211.629 kb on - strand, within AO353_10095 at 2211.702 kb on + strand, within AO353_10095 at 2211.702 kb on + strand, within AO353_10095 at 2211.702 kb on + strand, within AO353_10095 at 2211.702 kb on + strand, within AO353_10095 at 2211.702 kb on + strand, within AO353_10095 at 2211.702 kb on + strand, within AO353_10095 at 2211.703 kb on - strand, within AO353_10095 at 2211.703 kb on - strand, within AO353_10095 at 2211.884 kb on + strand, within AO353_10095 at 2211.908 kb on + strand, within AO353_10095 at 2211.908 kb on + strand, within AO353_10095 at 2211.908 kb on + strand, within AO353_10095 at 2211.908 kb on + strand, within AO353_10095 at 2211.908 kb on + strand, within AO353_10095 at 2211.908 kb on + strand, within AO353_10095 at 2211.908 kb on + strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2211.909 kb on - strand, within AO353_10095 at 2212.064 kb on - strand, within AO353_10095 at 2212.219 kb on + strand at 2212.219 kb on + strand at 2212.220 kb on - strand at 2212.220 kb on - strand at 2212.220 kb on - strand at 2212.220 kb on - strand at 2212.220 kb on - strand at 2212.220 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 2,209,867 + +0.2 2,209,867 + -0.4 2,209,867 + -0.8 2,209,867 + -0.2 2,209,867 + -1.7 2,209,867 + -1.0 2,209,868 - +0.0 2,209,868 - -0.0 2,209,868 - +1.6 2,209,945 + -0.4 2,209,945 + +0.1 2,209,945 + +0.8 2,209,945 + +0.9 2,209,945 + +1.3 2,209,945 + +2.8 2,209,945 + +0.8 2,209,945 + -0.8 2,209,945 + -0.5 2,209,945 + +0.4 2,209,945 + +0.0 2,209,945 + +0.8 2,209,945 + +0.2 2,209,945 + +0.9 2,209,945 + +0.2 2,209,946 - +1.2 2,209,946 - -0.2 2,209,946 - +1.4 2,209,946 - +0.3 2,209,946 - -2.0 2,209,946 - +0.9 2,209,946 - -2.1 2,209,946 - -1.4 2,209,946 - -0.8 2,209,946 - -0.4 2,209,946 - +1.9 2,209,946 - -0.8 2,210,361 + AO353_10085 0.57 -0.4 2,210,407 + AO353_10085 0.62 +1.2 2,210,407 + AO353_10085 0.62 +0.1 2,210,407 + AO353_10085 0.62 +1.5 2,210,407 + AO353_10085 0.62 -0.2 2,210,407 + AO353_10085 0.62 +3.4 2,210,407 + AO353_10085 0.62 -0.8 2,210,408 - AO353_10085 0.62 -2.1 2,210,408 - AO353_10085 0.62 +0.2 2,210,621 + AO353_10085 0.86 -0.8 2,210,622 - AO353_10085 0.87 -1.0 2,210,729 + +0.3 2,210,729 + +1.1 2,210,729 + -1.9 2,210,729 + -0.2 2,210,729 + -1.0 2,210,729 + -1.0 2,210,729 + +0.2 2,210,729 + +0.6 2,210,730 - +0.2 2,210,730 - +1.8 2,210,730 - -0.1 2,210,730 - -2.0 2,210,730 - +0.6 2,210,779 + +0.2 2,210,780 - +0.8 2,210,780 - +0.1 2,210,788 - +1.4 2,210,800 + -0.8 2,210,800 + -0.6 2,210,801 - -0.3 2,210,801 - -0.8 2,210,822 + -0.0 2,210,822 + -3.1 2,210,822 + +0.2 2,210,822 + -0.2 2,210,822 + +0.2 2,210,822 + -1.1 2,210,822 + +0.9 2,210,823 - +0.2 2,210,823 - +0.6 2,210,823 - +0.2 2,210,823 - -0.7 2,210,823 - +0.2 2,210,823 - +2.2 2,210,823 - -0.5 2,210,823 - -0.4 2,210,830 + +0.2 2,210,830 + -1.0 2,210,830 + -0.8 2,210,830 + -0.4 2,210,831 - +0.5 2,210,833 + -1.4 2,210,833 + +0.2 2,210,833 + +1.0 2,210,833 + -0.3 2,210,833 + +1.2 2,210,833 + +0.5 2,210,833 + -0.4 2,210,833 + -1.8 2,210,833 + +0.2 2,210,833 + +0.2 2,210,834 - +0.7 2,210,834 - +0.1 2,210,834 - +0.2 2,210,834 - -1.2 2,210,834 - +0.8 2,210,834 - -0.8 2,210,834 - +1.1 2,210,871 + +0.6 2,210,871 + -0.1 2,210,871 + -2.1 2,210,871 + +0.1 2,210,871 + -1.1 2,210,871 + -2.4 2,210,872 - +0.5 2,210,872 - +0.4 2,211,064 + AO353_10090 0.53 +1.1 2,211,064 + AO353_10090 0.53 -0.4 2,211,064 + AO353_10090 0.53 +1.8 2,211,065 - AO353_10090 0.53 +0.0 2,211,065 - AO353_10090 0.53 +0.7 2,211,065 - AO353_10090 0.53 +0.2 2,211,065 - AO353_10090 0.53 +1.1 2,211,065 - AO353_10090 0.53 +0.2 2,211,066 + AO353_10090 0.53 -0.1 2,211,066 + AO353_10090 0.53 +2.7 2,211,066 + AO353_10090 0.53 -0.6 2,211,066 + AO353_10090 0.53 -0.0 2,211,067 - AO353_10090 0.53 -1.8 2,211,067 - AO353_10090 0.53 +0.2 2,211,067 - AO353_10090 0.53 +1.9 2,211,067 - AO353_10090 0.53 +2.4 2,211,158 - AO353_10090 0.76 +0.2 2,211,267 + +1.8 2,211,267 + -0.2 2,211,628 + AO353_10095 0.37 -2.1 2,211,628 + AO353_10095 0.37 -0.3 2,211,629 - AO353_10095 0.37 +0.6 2,211,702 + AO353_10095 0.45 -0.0 2,211,702 + AO353_10095 0.45 -0.2 2,211,702 + AO353_10095 0.45 +1.7 2,211,702 + AO353_10095 0.45 -1.3 2,211,702 + AO353_10095 0.45 -2.6 2,211,702 + AO353_10095 0.45 +0.9 2,211,703 - AO353_10095 0.45 -0.6 2,211,703 - AO353_10095 0.45 +1.7 2,211,884 + AO353_10095 0.64 -0.6 2,211,908 + AO353_10095 0.66 -0.5 2,211,908 + AO353_10095 0.66 +0.5 2,211,908 + AO353_10095 0.66 +1.6 2,211,908 + AO353_10095 0.66 +0.8 2,211,908 + AO353_10095 0.66 +0.6 2,211,908 + AO353_10095 0.66 -0.4 2,211,908 + AO353_10095 0.66 -0.0 2,211,909 - AO353_10095 0.66 -1.7 2,211,909 - AO353_10095 0.66 -1.1 2,211,909 - AO353_10095 0.66 -0.1 2,211,909 - AO353_10095 0.66 +0.2 2,211,909 - AO353_10095 0.66 -1.3 2,211,909 - AO353_10095 0.66 +1.1 2,211,909 - AO353_10095 0.66 -0.2 2,211,909 - AO353_10095 0.66 -0.6 2,211,909 - AO353_10095 0.66 -0.3 2,212,064 - AO353_10095 0.82 +0.7 2,212,219 + -0.6 2,212,219 + +2.2 2,212,220 - +0.2 2,212,220 - -0.8 2,212,220 - +0.5 2,212,220 - -0.6 2,212,220 - -0.4 2,212,220 - +1.3
Or see this region's nucleotide sequence