Experiment: Ionizing radiation, 126.196 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09215 and AO353_09220 are separated by 7 nucleotides AO353_09220 and AO353_09225 are separated by 133 nucleotides
AO353_09215: AO353_09215 - peptide ABC transporter substrate-binding protein, at 2,022,503 to 2,024,089
_09215
AO353_09220: AO353_09220 - hypothetical protein, at 2,024,097 to 2,024,771
_09220
AO353_09225: AO353_09225 - phosphopantothenoylcysteine decarboxylase, at 2,024,905 to 2,026,113
_09225
Position (kb)
2024
2025 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2023.157 kb on + strand, within AO353_09215 at 2023.157 kb on + strand, within AO353_09215 at 2023.157 kb on + strand, within AO353_09215 at 2023.158 kb on - strand, within AO353_09215 at 2023.158 kb on - strand, within AO353_09215 at 2023.158 kb on - strand, within AO353_09215 at 2023.158 kb on - strand, within AO353_09215 at 2023.175 kb on + strand, within AO353_09215 at 2023.175 kb on + strand, within AO353_09215 at 2023.176 kb on - strand, within AO353_09215 at 2023.176 kb on - strand, within AO353_09215 at 2023.176 kb on - strand, within AO353_09215 at 2023.176 kb on - strand, within AO353_09215 at 2023.176 kb on - strand, within AO353_09215 at 2023.339 kb on + strand, within AO353_09215 at 2023.339 kb on + strand, within AO353_09215 at 2023.339 kb on + strand, within AO353_09215 at 2023.340 kb on - strand, within AO353_09215 at 2023.340 kb on - strand, within AO353_09215 at 2023.340 kb on - strand, within AO353_09215 at 2023.340 kb on - strand, within AO353_09215 at 2023.445 kb on + strand, within AO353_09215 at 2023.445 kb on + strand, within AO353_09215 at 2023.445 kb on + strand, within AO353_09215 at 2023.446 kb on - strand, within AO353_09215 at 2023.446 kb on - strand, within AO353_09215 at 2023.446 kb on - strand, within AO353_09215 at 2023.446 kb on - strand, within AO353_09215 at 2023.514 kb on + strand, within AO353_09215 at 2023.514 kb on + strand, within AO353_09215 at 2023.515 kb on - strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.597 kb on + strand, within AO353_09215 at 2023.598 kb on - strand, within AO353_09215 at 2023.598 kb on - strand, within AO353_09215 at 2023.598 kb on - strand, within AO353_09215 at 2023.681 kb on - strand, within AO353_09215 at 2023.681 kb on - strand, within AO353_09215 at 2023.866 kb on - strand, within AO353_09215 at 2023.886 kb on - strand, within AO353_09215 at 2023.891 kb on + strand, within AO353_09215 at 2023.891 kb on + strand, within AO353_09215 at 2023.891 kb on + strand, within AO353_09215 at 2023.892 kb on - strand, within AO353_09215 at 2023.892 kb on - strand, within AO353_09215 at 2023.940 kb on + strand at 2023.940 kb on + strand at 2023.941 kb on - strand at 2023.941 kb on - strand at 2024.007 kb on - strand at 2024.066 kb on + strand at 2024.066 kb on + strand at 2024.087 kb on + strand at 2024.087 kb on + strand at 2024.088 kb on - strand at 2024.088 kb on - strand at 2024.098 kb on + strand at 2024.098 kb on + strand at 2024.098 kb on + strand at 2024.098 kb on + strand at 2024.098 kb on + strand at 2024.099 kb on - strand at 2024.099 kb on - strand at 2024.099 kb on - strand at 2024.099 kb on - strand at 2024.099 kb on - strand at 2024.099 kb on - strand at 2024.099 kb on - strand at 2024.110 kb on + strand at 2024.161 kb on - strand at 2024.314 kb on + strand, within AO353_09220 at 2024.315 kb on - strand, within AO353_09220 at 2024.349 kb on + strand, within AO353_09220 at 2024.349 kb on + strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.350 kb on - strand, within AO353_09220 at 2024.437 kb on + strand, within AO353_09220 at 2024.437 kb on + strand, within AO353_09220 at 2024.437 kb on + strand, within AO353_09220 at 2024.437 kb on + strand, within AO353_09220 at 2024.438 kb on - strand, within AO353_09220 at 2024.438 kb on - strand, within AO353_09220 at 2024.438 kb on - strand, within AO353_09220 at 2024.438 kb on - strand, within AO353_09220 at 2024.670 kb on + strand, within AO353_09220 at 2024.670 kb on + strand, within AO353_09220 at 2024.671 kb on - strand, within AO353_09220 at 2024.671 kb on - strand, within AO353_09220 at 2024.671 kb on - strand, within AO353_09220 at 2024.671 kb on - strand, within AO353_09220 at 2024.671 kb on - strand, within AO353_09220 at 2024.685 kb on + strand, within AO353_09220 at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.771 kb on + strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.772 kb on - strand at 2024.825 kb on + strand at 2024.825 kb on + strand at 2024.825 kb on + strand at 2024.825 kb on + strand at 2024.825 kb on + strand at 2024.825 kb on + strand at 2024.825 kb on + strand at 2024.876 kb on + strand at 2024.876 kb on + strand at 2024.876 kb on + strand at 2024.876 kb on + strand at 2024.876 kb on + strand at 2024.876 kb on + strand at 2024.876 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 126.196 Gy, remove 2,023,157 + AO353_09215 0.41 -0.9 2,023,157 + AO353_09215 0.41 -0.3 2,023,157 + AO353_09215 0.41 +0.5 2,023,158 - AO353_09215 0.41 +0.3 2,023,158 - AO353_09215 0.41 -0.2 2,023,158 - AO353_09215 0.41 -1.1 2,023,158 - AO353_09215 0.41 +0.8 2,023,175 + AO353_09215 0.42 -1.4 2,023,175 + AO353_09215 0.42 -0.5 2,023,176 - AO353_09215 0.42 +0.9 2,023,176 - AO353_09215 0.42 +1.1 2,023,176 - AO353_09215 0.42 -0.5 2,023,176 - AO353_09215 0.42 +1.9 2,023,176 - AO353_09215 0.42 +1.4 2,023,339 + AO353_09215 0.53 +1.2 2,023,339 + AO353_09215 0.53 +0.2 2,023,339 + AO353_09215 0.53 -1.0 2,023,340 - AO353_09215 0.53 +1.2 2,023,340 - AO353_09215 0.53 -1.2 2,023,340 - AO353_09215 0.53 +1.4 2,023,340 - AO353_09215 0.53 -0.8 2,023,445 + AO353_09215 0.59 -0.8 2,023,445 + AO353_09215 0.59 +0.2 2,023,445 + AO353_09215 0.59 +0.7 2,023,446 - AO353_09215 0.59 +0.2 2,023,446 - AO353_09215 0.59 +2.2 2,023,446 - AO353_09215 0.59 -0.7 2,023,446 - AO353_09215 0.59 +1.8 2,023,514 + AO353_09215 0.64 -1.8 2,023,514 + AO353_09215 0.64 -0.4 2,023,515 - AO353_09215 0.64 -0.2 2,023,597 + AO353_09215 0.69 -0.1 2,023,597 + AO353_09215 0.69 +0.2 2,023,597 + AO353_09215 0.69 -0.0 2,023,597 + AO353_09215 0.69 +0.2 2,023,597 + AO353_09215 0.69 +0.0 2,023,597 + AO353_09215 0.69 -0.7 2,023,597 + AO353_09215 0.69 -0.1 2,023,597 + AO353_09215 0.69 -0.3 2,023,598 - AO353_09215 0.69 -0.0 2,023,598 - AO353_09215 0.69 +0.3 2,023,598 - AO353_09215 0.69 +1.2 2,023,681 - AO353_09215 0.74 -0.1 2,023,681 - AO353_09215 0.74 -0.7 2,023,866 - AO353_09215 0.86 -0.3 2,023,886 - AO353_09215 0.87 -0.4 2,023,891 + AO353_09215 0.87 -0.5 2,023,891 + AO353_09215 0.87 +0.3 2,023,891 + AO353_09215 0.87 -1.0 2,023,892 - AO353_09215 0.88 -0.6 2,023,892 - AO353_09215 0.88 -0.7 2,023,940 + -0.4 2,023,940 + +1.0 2,023,941 - +1.8 2,023,941 - +0.9 2,024,007 - +0.1 2,024,066 + +0.5 2,024,066 + -0.1 2,024,087 + +0.1 2,024,087 + +1.1 2,024,088 - +0.0 2,024,088 - -0.1 2,024,098 + -0.2 2,024,098 + -1.6 2,024,098 + -1.1 2,024,098 + -2.6 2,024,098 + +0.9 2,024,099 - +0.3 2,024,099 - +0.2 2,024,099 - +0.4 2,024,099 - -0.8 2,024,099 - +0.0 2,024,099 - +0.2 2,024,099 - -0.2 2,024,110 + +1.2 2,024,161 - -1.1 2,024,314 + AO353_09220 0.32 +0.4 2,024,315 - AO353_09220 0.32 +0.2 2,024,349 + AO353_09220 0.37 +1.4 2,024,349 + AO353_09220 0.37 -1.0 2,024,350 - AO353_09220 0.37 +1.2 2,024,350 - AO353_09220 0.37 -0.5 2,024,350 - AO353_09220 0.37 +2.0 2,024,350 - AO353_09220 0.37 -0.2 2,024,350 - AO353_09220 0.37 +0.2 2,024,350 - AO353_09220 0.37 -0.4 2,024,350 - AO353_09220 0.37 -1.1 2,024,350 - AO353_09220 0.37 -0.7 2,024,350 - AO353_09220 0.37 -0.6 2,024,350 - AO353_09220 0.37 -0.5 2,024,350 - AO353_09220 0.37 +0.4 2,024,437 + AO353_09220 0.50 +1.4 2,024,437 + AO353_09220 0.50 -1.4 2,024,437 + AO353_09220 0.50 +1.4 2,024,437 + AO353_09220 0.50 +0.2 2,024,438 - AO353_09220 0.51 -1.5 2,024,438 - AO353_09220 0.51 -0.0 2,024,438 - AO353_09220 0.51 +0.6 2,024,438 - AO353_09220 0.51 -2.8 2,024,670 + AO353_09220 0.85 -1.1 2,024,670 + AO353_09220 0.85 -0.5 2,024,671 - AO353_09220 0.85 +0.2 2,024,671 - AO353_09220 0.85 -0.2 2,024,671 - AO353_09220 0.85 +0.7 2,024,671 - AO353_09220 0.85 -0.5 2,024,671 - AO353_09220 0.85 +0.3 2,024,685 + AO353_09220 0.87 +1.2 2,024,771 + -1.6 2,024,771 + +0.2 2,024,771 + +0.0 2,024,771 + +0.7 2,024,771 + +1.2 2,024,771 + +1.2 2,024,771 + -1.1 2,024,771 + -0.7 2,024,771 + +0.6 2,024,771 + +0.6 2,024,771 + -1.4 2,024,772 - -0.3 2,024,772 - +0.9 2,024,772 - -2.4 2,024,772 - +0.2 2,024,772 - -0.4 2,024,772 - -0.1 2,024,772 - -0.7 2,024,772 - +1.4 2,024,772 - +0.3 2,024,772 - +0.5 2,024,825 + -0.4 2,024,825 + +0.0 2,024,825 + -1.0 2,024,825 + +0.2 2,024,825 + +0.5 2,024,825 + -0.8 2,024,825 + -0.6 2,024,876 + -0.4 2,024,876 + -0.5 2,024,876 + -0.7 2,024,876 + +0.6 2,024,876 + -1.5 2,024,876 + -0.9 2,024,876 + +0.2
Or see this region's nucleotide sequence