Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS05140 and ABZR87_RS05145 are separated by 142 nucleotides ABZR87_RS05145 and ABZR87_RS05150 are separated by 46 nucleotides ABZR87_RS05150 and ABZR87_RS05155 are separated by 0 nucleotides ABZR87_RS05155 and ABZR87_RS05160 are separated by 29 nucleotides ABZR87_RS05160 and ABZR87_RS05165 are separated by 42 nucleotides
ABZR87_RS05140: ABZR87_RS05140 - ATP-binding protein, at 1,082,156 to 1,083,502
_RS05140
ABZR87_RS05145: ABZR87_RS05145 - copper chaperone PCu(A)C, at 1,083,645 to 1,084,142
_RS05145
ABZR87_RS05150: ABZR87_RS05150 - hypothetical protein, at 1,084,189 to 1,084,410
_RS05150
ABZR87_RS05155: ABZR87_RS05155 - cysteine-rich CWC family protein, at 1,084,411 to 1,084,593
_RS05155
ABZR87_RS05160: ABZR87_RS05160 - zf-HC2 domain-containing protein, at 1,084,623 to 1,084,835
_RS05160
ABZR87_RS05165: ABZR87_RS05165 - sigma-70 family RNA polymerase sigma factor, at 1,084,878 to 1,085,471
_RS05165
Position (kb)
1084
1085 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1083.272 kb on - strand, within ABZR87_RS05140 at 1083.452 kb on + strand at 1083.452 kb on + strand at 1083.453 kb on - strand at 1083.453 kb on - strand at 1083.515 kb on + strand at 1083.515 kb on + strand at 1083.516 kb on - strand at 1083.584 kb on + strand at 1083.584 kb on + strand at 1083.584 kb on + strand at 1083.584 kb on + strand at 1083.584 kb on + strand at 1083.585 kb on - strand at 1083.585 kb on - strand at 1083.585 kb on - strand at 1083.608 kb on + strand at 1083.609 kb on - strand at 1083.963 kb on + strand, within ABZR87_RS05145 at 1084.174 kb on + strand at 1084.174 kb on + strand at 1084.174 kb on + strand at 1084.174 kb on + strand at 1084.174 kb on + strand at 1084.174 kb on + strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.175 kb on - strand at 1084.194 kb on + strand at 1084.195 kb on - strand at 1084.195 kb on - strand at 1084.195 kb on - strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.600 kb on + strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.601 kb on - strand at 1084.811 kb on + strand, within ABZR87_RS05160 at 1084.811 kb on + strand, within ABZR87_RS05160 at 1084.811 kb on + strand, within ABZR87_RS05160 at 1084.812 kb on - strand, within ABZR87_RS05160 at 1084.812 kb on - strand, within ABZR87_RS05160 at 1084.812 kb on - strand, within ABZR87_RS05160 at 1084.851 kb on + strand at 1085.149 kb on + strand, within ABZR87_RS05165 at 1085.149 kb on + strand, within ABZR87_RS05165 at 1085.149 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.305 kb on + strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165 at 1085.306 kb on - strand, within ABZR87_RS05165
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 1,083,272 - ABZR87_RS05140 0.83 -0.8 1,083,452 + -0.1 1,083,452 + +0.3 1,083,453 - -0.1 1,083,453 - +0.2 1,083,515 + +0.5 1,083,515 + -1.1 1,083,516 - +1.2 1,083,584 + -0.1 1,083,584 + +0.9 1,083,584 + -0.0 1,083,584 + +0.5 1,083,584 + +0.7 1,083,585 - +0.4 1,083,585 - -1.2 1,083,585 - -0.4 1,083,608 + -1.0 1,083,609 - +1.2 1,083,963 + ABZR87_RS05145 0.64 -0.7 1,084,174 + -0.1 1,084,174 + +0.3 1,084,174 + -0.4 1,084,174 + -0.2 1,084,174 + -0.2 1,084,174 + +0.2 1,084,175 - +0.4 1,084,175 - -0.6 1,084,175 - +0.1 1,084,175 - -0.2 1,084,175 - +0.2 1,084,175 - -0.2 1,084,175 - -1.4 1,084,175 - +0.6 1,084,175 - -0.4 1,084,175 - -0.4 1,084,175 - -0.2 1,084,194 + -0.7 1,084,195 - -1.1 1,084,195 - +0.1 1,084,195 - -0.0 1,084,600 + +0.0 1,084,600 + -0.1 1,084,600 + +0.4 1,084,600 + +0.2 1,084,600 + +0.0 1,084,600 + -0.2 1,084,600 + +0.2 1,084,600 + -1.7 1,084,600 + -1.7 1,084,600 + -0.1 1,084,600 + -0.3 1,084,600 + +0.3 1,084,600 + -0.0 1,084,601 - +0.1 1,084,601 - +0.5 1,084,601 - -0.1 1,084,601 - +0.4 1,084,601 - +0.2 1,084,601 - -0.4 1,084,601 - +2.0 1,084,601 - -0.7 1,084,601 - -0.1 1,084,601 - -0.1 1,084,601 - -0.1 1,084,601 - -0.2 1,084,811 + ABZR87_RS05160 0.88 -0.7 1,084,811 + ABZR87_RS05160 0.88 +0.4 1,084,811 + ABZR87_RS05160 0.88 -0.7 1,084,812 - ABZR87_RS05160 0.89 -0.0 1,084,812 - ABZR87_RS05160 0.89 +0.6 1,084,812 - ABZR87_RS05160 0.89 -1.8 1,084,851 + -0.2 1,085,149 + ABZR87_RS05165 0.46 +1.1 1,085,149 + ABZR87_RS05165 0.46 +0.1 1,085,149 + ABZR87_RS05165 0.46 -0.1 1,085,305 + ABZR87_RS05165 0.72 -0.3 1,085,305 + ABZR87_RS05165 0.72 -0.2 1,085,305 + ABZR87_RS05165 0.72 +1.0 1,085,305 + ABZR87_RS05165 0.72 -0.4 1,085,305 + ABZR87_RS05165 0.72 +0.4 1,085,305 + ABZR87_RS05165 0.72 +0.4 1,085,305 + ABZR87_RS05165 0.72 -0.8 1,085,305 + ABZR87_RS05165 0.72 +0.5 1,085,305 + ABZR87_RS05165 0.72 -0.8 1,085,305 + ABZR87_RS05165 0.72 +0.5 1,085,306 - ABZR87_RS05165 0.72 +0.0 1,085,306 - ABZR87_RS05165 0.72 +0.1 1,085,306 - ABZR87_RS05165 0.72 +1.2 1,085,306 - ABZR87_RS05165 0.72 -0.6 1,085,306 - ABZR87_RS05165 0.72 +0.1 1,085,306 - ABZR87_RS05165 0.72 +0.6 1,085,306 - ABZR87_RS05165 0.72 +1.2 1,085,306 - ABZR87_RS05165 0.72 -0.1 1,085,306 - ABZR87_RS05165 0.72 +0.0 1,085,306 - ABZR87_RS05165 0.72 +0.4 1,085,306 - ABZR87_RS05165 0.72 -0.9 1,085,306 - ABZR87_RS05165 0.72 -0.7 1,085,306 - ABZR87_RS05165 0.72 +2.2
Or see this region's nucleotide sequence