Experiment: KB with Terpene 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4874 and Psyr_4875 overlap by 4 nucleotides Psyr_4875 and Psyr_4876 are separated by 28 nucleotides Psyr_4876 and Psyr_4877 are separated by 382 nucleotides
Psyr_4874: Psyr_4874 - ABC transporter, at 5,785,839 to 5,786,651
_4874
Psyr_4875: Psyr_4875 - Binding-protein-dependent transport systems inner membrane component, at 5,786,648 to 5,787,445
_4875
Psyr_4876: Psyr_4876 - ABC transporter, substrate-binding protein, aliphatic sulfonate, at 5,787,474 to 5,788,439
_4876
Psyr_4877: Psyr_4877 - 1-Cys peroxiredoxin, at 5,788,822 to 5,789,460
_4877
Position (kb) 5787
5788
5789 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5786.744 kb on + strand, within Psyr_4875 at 5786.751 kb on + strand, within Psyr_4875 at 5786.751 kb on + strand, within Psyr_4875 at 5786.752 kb on - strand, within Psyr_4875 at 5786.752 kb on - strand, within Psyr_4875 at 5786.902 kb on + strand, within Psyr_4875 at 5786.902 kb on + strand, within Psyr_4875 at 5786.902 kb on + strand, within Psyr_4875 at 5786.902 kb on + strand, within Psyr_4875 at 5786.902 kb on + strand, within Psyr_4875 at 5786.902 kb on + strand, within Psyr_4875 at 5786.902 kb on + strand, within Psyr_4875 at 5786.903 kb on - strand, within Psyr_4875 at 5786.903 kb on - strand, within Psyr_4875 at 5786.903 kb on - strand, within Psyr_4875 at 5786.903 kb on - strand, within Psyr_4875 at 5786.903 kb on - strand, within Psyr_4875 at 5786.903 kb on - strand, within Psyr_4875 at 5786.903 kb on - strand, within Psyr_4875 at 5786.961 kb on + strand, within Psyr_4875 at 5786.961 kb on + strand, within Psyr_4875 at 5786.962 kb on - strand, within Psyr_4875 at 5786.962 kb on - strand, within Psyr_4875 at 5786.979 kb on - strand, within Psyr_4875 at 5786.979 kb on - strand, within Psyr_4875 at 5787.012 kb on + strand, within Psyr_4875 at 5787.012 kb on + strand, within Psyr_4875 at 5787.012 kb on + strand, within Psyr_4875 at 5787.012 kb on + strand, within Psyr_4875 at 5787.013 kb on - strand, within Psyr_4875 at 5787.013 kb on - strand, within Psyr_4875 at 5787.024 kb on + strand, within Psyr_4875 at 5787.024 kb on + strand, within Psyr_4875 at 5787.060 kb on - strand, within Psyr_4875 at 5787.060 kb on - strand, within Psyr_4875 at 5787.293 kb on + strand, within Psyr_4875 at 5787.293 kb on + strand, within Psyr_4875 at 5787.294 kb on - strand, within Psyr_4875 at 5787.294 kb on - strand, within Psyr_4875 at 5787.556 kb on + strand at 5787.557 kb on - strand at 5787.557 kb on - strand at 5787.778 kb on + strand, within Psyr_4876 at 5787.779 kb on - strand, within Psyr_4876 at 5787.779 kb on - strand, within Psyr_4876 at 5787.796 kb on + strand, within Psyr_4876 at 5787.797 kb on - strand, within Psyr_4876 at 5787.797 kb on - strand, within Psyr_4876 at 5787.875 kb on - strand, within Psyr_4876 at 5787.959 kb on + strand, within Psyr_4876 at 5787.967 kb on + strand, within Psyr_4876 at 5787.967 kb on + strand, within Psyr_4876 at 5787.967 kb on + strand, within Psyr_4876 at 5787.967 kb on + strand, within Psyr_4876 at 5787.968 kb on - strand, within Psyr_4876 at 5787.968 kb on - strand, within Psyr_4876 at 5787.968 kb on - strand, within Psyr_4876 at 5788.007 kb on - strand, within Psyr_4876 at 5788.025 kb on + strand, within Psyr_4876 at 5788.124 kb on - strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.132 kb on + strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.133 kb on - strand, within Psyr_4876 at 5788.206 kb on + strand, within Psyr_4876 at 5788.206 kb on + strand, within Psyr_4876 at 5788.206 kb on + strand, within Psyr_4876 at 5788.206 kb on + strand, within Psyr_4876 at 5788.207 kb on - strand, within Psyr_4876 at 5788.207 kb on - strand, within Psyr_4876 at 5788.207 kb on - strand, within Psyr_4876 at 5788.327 kb on + strand, within Psyr_4876 at 5788.327 kb on + strand, within Psyr_4876 at 5788.328 kb on - strand, within Psyr_4876 at 5788.328 kb on - strand, within Psyr_4876 at 5788.328 kb on - strand, within Psyr_4876 at 5788.328 kb on - strand, within Psyr_4876 at 5788.328 kb on - strand, within Psyr_4876 at 5788.328 kb on - strand, within Psyr_4876 at 5788.328 kb on - strand, within Psyr_4876 at 5788.439 kb on + strand at 5788.439 kb on + strand at 5788.452 kb on - strand at 5788.455 kb on + strand at 5788.455 kb on + strand at 5788.455 kb on + strand at 5788.455 kb on + strand at 5788.455 kb on + strand at 5788.455 kb on + strand at 5788.455 kb on + strand at 5788.455 kb on + strand at 5788.456 kb on - strand at 5788.456 kb on - strand at 5788.456 kb on - strand at 5788.456 kb on - strand at 5788.456 kb on - strand at 5788.518 kb on - strand at 5788.518 kb on - strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.599 kb on + strand at 5788.600 kb on - strand at 5788.600 kb on - strand at 5788.600 kb on - strand at 5788.600 kb on - strand at 5788.600 kb on - strand at 5788.600 kb on - strand at 5788.600 kb on - strand at 5788.672 kb on + strand at 5788.672 kb on + strand at 5788.673 kb on - strand at 5788.676 kb on + strand at 5788.676 kb on + strand at 5788.677 kb on - strand at 5788.677 kb on - strand at 5788.701 kb on - strand at 5788.744 kb on + strand at 5788.744 kb on + strand at 5788.768 kb on + strand at 5788.769 kb on - strand at 5788.812 kb on - strand at 5788.871 kb on + strand at 5788.871 kb on + strand at 5788.871 kb on + strand at 5788.871 kb on + strand at 5788.872 kb on - strand at 5788.872 kb on - strand at 5788.872 kb on - strand at 5788.930 kb on + strand, within Psyr_4877 at 5788.930 kb on + strand, within Psyr_4877 at 5788.930 kb on + strand, within Psyr_4877 at 5788.930 kb on + strand, within Psyr_4877 at 5788.930 kb on + strand, within Psyr_4877 at 5788.931 kb on - strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.973 kb on + strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5788.974 kb on - strand, within Psyr_4877 at 5789.025 kb on + strand, within Psyr_4877 at 5789.046 kb on - strand, within Psyr_4877 at 5789.049 kb on + strand, within Psyr_4877 at 5789.049 kb on + strand, within Psyr_4877 at 5789.050 kb on - strand, within Psyr_4877 at 5789.050 kb on - strand, within Psyr_4877 at 5789.138 kb on + strand, within Psyr_4877 at 5789.139 kb on - strand, within Psyr_4877 at 5789.139 kb on - strand, within Psyr_4877 at 5789.398 kb on + strand at 5789.398 kb on + strand at 5789.398 kb on + strand at 5789.398 kb on + strand at 5789.398 kb on + strand at 5789.398 kb on + strand at 5789.399 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Terpene 10 mM remove 5,786,744 + Psyr_4875 0.12 +2.5 5,786,751 + Psyr_4875 0.13 +3.0 5,786,751 + Psyr_4875 0.13 -0.1 5,786,752 - Psyr_4875 0.13 -0.4 5,786,752 - Psyr_4875 0.13 -0.8 5,786,902 + Psyr_4875 0.32 -0.9 5,786,902 + Psyr_4875 0.32 +0.3 5,786,902 + Psyr_4875 0.32 -0.2 5,786,902 + Psyr_4875 0.32 -0.3 5,786,902 + Psyr_4875 0.32 -1.5 5,786,902 + Psyr_4875 0.32 +0.6 5,786,902 + Psyr_4875 0.32 -0.0 5,786,903 - Psyr_4875 0.32 +1.4 5,786,903 - Psyr_4875 0.32 -0.1 5,786,903 - Psyr_4875 0.32 +0.5 5,786,903 - Psyr_4875 0.32 -0.0 5,786,903 - Psyr_4875 0.32 -0.1 5,786,903 - Psyr_4875 0.32 +0.4 5,786,903 - Psyr_4875 0.32 -1.4 5,786,961 + Psyr_4875 0.39 +3.2 5,786,961 + Psyr_4875 0.39 +1.2 5,786,962 - Psyr_4875 0.39 +1.2 5,786,962 - Psyr_4875 0.39 -0.2 5,786,979 - Psyr_4875 0.41 -0.3 5,786,979 - Psyr_4875 0.41 +0.9 5,787,012 + Psyr_4875 0.46 +1.8 5,787,012 + Psyr_4875 0.46 -0.9 5,787,012 + Psyr_4875 0.46 +0.4 5,787,012 + Psyr_4875 0.46 -0.7 5,787,013 - Psyr_4875 0.46 -0.4 5,787,013 - Psyr_4875 0.46 +0.1 5,787,024 + Psyr_4875 0.47 +0.8 5,787,024 + Psyr_4875 0.47 +0.4 5,787,060 - Psyr_4875 0.52 -0.2 5,787,060 - Psyr_4875 0.52 -0.3 5,787,293 + Psyr_4875 0.81 -0.6 5,787,293 + Psyr_4875 0.81 +0.2 5,787,294 - Psyr_4875 0.81 -1.1 5,787,294 - Psyr_4875 0.81 -1.7 5,787,556 + -0.9 5,787,557 - +0.6 5,787,557 - +0.3 5,787,778 + Psyr_4876 0.31 +0.4 5,787,779 - Psyr_4876 0.32 +0.7 5,787,779 - Psyr_4876 0.32 +0.1 5,787,796 + Psyr_4876 0.33 +1.4 5,787,797 - Psyr_4876 0.33 -0.3 5,787,797 - Psyr_4876 0.33 -0.0 5,787,875 - Psyr_4876 0.42 -1.2 5,787,959 + Psyr_4876 0.50 +0.7 5,787,967 + Psyr_4876 0.51 -0.3 5,787,967 + Psyr_4876 0.51 -0.8 5,787,967 + Psyr_4876 0.51 +1.2 5,787,967 + Psyr_4876 0.51 +1.0 5,787,968 - Psyr_4876 0.51 +0.4 5,787,968 - Psyr_4876 0.51 +2.8 5,787,968 - Psyr_4876 0.51 +0.4 5,788,007 - Psyr_4876 0.55 +0.7 5,788,025 + Psyr_4876 0.57 -0.7 5,788,124 - Psyr_4876 0.67 +0.4 5,788,132 + Psyr_4876 0.68 -1.9 5,788,132 + Psyr_4876 0.68 +0.7 5,788,132 + Psyr_4876 0.68 -0.3 5,788,132 + Psyr_4876 0.68 +0.3 5,788,132 + Psyr_4876 0.68 +0.4 5,788,132 + Psyr_4876 0.68 -0.8 5,788,132 + Psyr_4876 0.68 -1.0 5,788,132 + Psyr_4876 0.68 -0.6 5,788,132 + Psyr_4876 0.68 +0.7 5,788,132 + Psyr_4876 0.68 -1.8 5,788,132 + Psyr_4876 0.68 +0.7 5,788,132 + Psyr_4876 0.68 -0.4 5,788,132 + Psyr_4876 0.68 +0.3 5,788,132 + Psyr_4876 0.68 +0.1 5,788,132 + Psyr_4876 0.68 -2.0 5,788,132 + Psyr_4876 0.68 +1.2 5,788,133 - Psyr_4876 0.68 +0.9 5,788,133 - Psyr_4876 0.68 -1.2 5,788,133 - Psyr_4876 0.68 -0.1 5,788,133 - Psyr_4876 0.68 -0.1 5,788,133 - Psyr_4876 0.68 +0.0 5,788,133 - Psyr_4876 0.68 +2.2 5,788,133 - Psyr_4876 0.68 +1.9 5,788,133 - Psyr_4876 0.68 +0.6 5,788,133 - Psyr_4876 0.68 +1.5 5,788,133 - Psyr_4876 0.68 +1.0 5,788,133 - Psyr_4876 0.68 +1.2 5,788,133 - Psyr_4876 0.68 -0.5 5,788,206 + Psyr_4876 0.76 +1.1 5,788,206 + Psyr_4876 0.76 +0.8 5,788,206 + Psyr_4876 0.76 -1.0 5,788,206 + Psyr_4876 0.76 +0.5 5,788,207 - Psyr_4876 0.76 +1.0 5,788,207 - Psyr_4876 0.76 +0.1 5,788,207 - Psyr_4876 0.76 +0.9 5,788,327 + Psyr_4876 0.88 -0.2 5,788,327 + Psyr_4876 0.88 -1.8 5,788,328 - Psyr_4876 0.88 +0.4 5,788,328 - Psyr_4876 0.88 +1.3 5,788,328 - Psyr_4876 0.88 -0.7 5,788,328 - Psyr_4876 0.88 -1.0 5,788,328 - Psyr_4876 0.88 -1.5 5,788,328 - Psyr_4876 0.88 +0.0 5,788,328 - Psyr_4876 0.88 -0.5 5,788,439 + -1.5 5,788,439 + +0.2 5,788,452 - -0.3 5,788,455 + +0.0 5,788,455 + +0.9 5,788,455 + -0.3 5,788,455 + +0.4 5,788,455 + -0.4 5,788,455 + +0.5 5,788,455 + -0.8 5,788,455 + -1.0 5,788,456 - -1.4 5,788,456 - +0.0 5,788,456 - +0.6 5,788,456 - -0.2 5,788,456 - +0.7 5,788,518 - -0.4 5,788,518 - +0.1 5,788,599 + +0.1 5,788,599 + -0.0 5,788,599 + -1.3 5,788,599 + -0.1 5,788,599 + +1.3 5,788,599 + +1.4 5,788,599 + +1.2 5,788,599 + -0.2 5,788,599 + -0.7 5,788,599 + -0.8 5,788,599 + -0.7 5,788,600 - +0.6 5,788,600 - +0.6 5,788,600 - -1.0 5,788,600 - +0.1 5,788,600 - -0.6 5,788,600 - -0.8 5,788,600 - -0.0 5,788,672 + +0.5 5,788,672 + +0.7 5,788,673 - +2.5 5,788,676 + -0.4 5,788,676 + +0.1 5,788,677 - +0.1 5,788,677 - +2.4 5,788,701 - -0.1 5,788,744 + -1.8 5,788,744 + -0.1 5,788,768 + -0.1 5,788,769 - -0.1 5,788,812 - +0.6 5,788,871 + +0.3 5,788,871 + -0.1 5,788,871 + -0.6 5,788,871 + -0.6 5,788,872 - -0.3 5,788,872 - -0.9 5,788,872 - +0.2 5,788,930 + Psyr_4877 0.17 +2.2 5,788,930 + Psyr_4877 0.17 -0.4 5,788,930 + Psyr_4877 0.17 +2.0 5,788,930 + Psyr_4877 0.17 +0.1 5,788,930 + Psyr_4877 0.17 +0.5 5,788,931 - Psyr_4877 0.17 +0.6 5,788,973 + Psyr_4877 0.24 +0.0 5,788,973 + Psyr_4877 0.24 -0.6 5,788,973 + Psyr_4877 0.24 -1.5 5,788,973 + Psyr_4877 0.24 -0.2 5,788,973 + Psyr_4877 0.24 -0.1 5,788,973 + Psyr_4877 0.24 -0.2 5,788,973 + Psyr_4877 0.24 -0.3 5,788,973 + Psyr_4877 0.24 -0.6 5,788,973 + Psyr_4877 0.24 -0.3 5,788,974 - Psyr_4877 0.24 -0.3 5,788,974 - Psyr_4877 0.24 +1.2 5,788,974 - Psyr_4877 0.24 -0.2 5,788,974 - Psyr_4877 0.24 +1.2 5,788,974 - Psyr_4877 0.24 +1.1 5,788,974 - Psyr_4877 0.24 -0.7 5,788,974 - Psyr_4877 0.24 +2.3 5,788,974 - Psyr_4877 0.24 -1.4 5,789,025 + Psyr_4877 0.32 +0.7 5,789,046 - Psyr_4877 0.35 -0.8 5,789,049 + Psyr_4877 0.36 +0.4 5,789,049 + Psyr_4877 0.36 -1.9 5,789,050 - Psyr_4877 0.36 -1.9 5,789,050 - Psyr_4877 0.36 +1.2 5,789,138 + Psyr_4877 0.49 -1.0 5,789,139 - Psyr_4877 0.50 -1.0 5,789,139 - Psyr_4877 0.50 +3.5 5,789,398 + -0.4 5,789,398 + -2.9 5,789,398 + +0.9 5,789,398 + -1.7 5,789,398 + +0.2 5,789,398 + -0.0 5,789,399 - +0.2
Or see this region's nucleotide sequence