Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05810

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
1,236,950	+		ABZR87_RS05805	0.36	-0.7
1,236,950	+		ABZR87_RS05805	0.36	-1.0
1,236,951	-		ABZR87_RS05805	0.36	-1.2
1,236,951	-		ABZR87_RS05805	0.36	-0.4
1,236,951	-		ABZR87_RS05805	0.36	-0.5
1,236,951	-		ABZR87_RS05805	0.36	-1.4
1,237,339	+		ABZR87_RS05805	0.63	+1.0
1,237,340	-		ABZR87_RS05805	0.63	+0.9
1,237,340	-		ABZR87_RS05805	0.63	+0.3
1,237,340	-		ABZR87_RS05805	0.63	-1.3
1,237,370	+		ABZR87_RS05805	0.65	+0.6
1,237,370	+		ABZR87_RS05805	0.65	-0.2
1,237,370	+		ABZR87_RS05805	0.65	+0.5
1,237,370	+		ABZR87_RS05805	0.65	-0.0
1,237,370	+		ABZR87_RS05805	0.65	+0.3
1,237,370	+		ABZR87_RS05805	0.65	+0.2
1,237,370	+		ABZR87_RS05805	0.65	+0.2
1,237,370	+		ABZR87_RS05805	0.65	-0.6
1,237,371	-		ABZR87_RS05805	0.65	+0.8
1,237,371	-		ABZR87_RS05805	0.65	+0.7
1,237,371	-		ABZR87_RS05805	0.65	+0.3
1,237,371	-		ABZR87_RS05805	0.65	+1.1
1,237,371	-		ABZR87_RS05805	0.65	+0.2
1,237,371	-		ABZR87_RS05805	0.65	+0.6
1,237,371	-		ABZR87_RS05805	0.65	-0.6
1,237,372	+		ABZR87_RS05805	0.65	+0.2
1,237,372	+		ABZR87_RS05805	0.65	+0.5
1,237,372	+		ABZR87_RS05805	0.65	-0.6
1,237,372	+		ABZR87_RS05805	0.65	+0.8
1,237,373	-		ABZR87_RS05805	0.65	-0.3
1,237,373	-		ABZR87_RS05805	0.65	-1.0
1,237,486	+		ABZR87_RS05805	0.73	-0.9
1,237,486	+		ABZR87_RS05805	0.73	-0.6
1,237,487	-		ABZR87_RS05805	0.73	-0.4
1,237,487	-		ABZR87_RS05805	0.73	-0.5
1,237,487	-		ABZR87_RS05805	0.73	+0.7
1,237,487	-		ABZR87_RS05805	0.73	+0.2
1,237,533	+		ABZR87_RS05805	0.76	-0.8
1,237,534	-		ABZR87_RS05805	0.76	+0.2
1,237,534	-		ABZR87_RS05805	0.76	-0.3
1,237,534	-		ABZR87_RS05805	0.76	+0.0
1,237,534	-		ABZR87_RS05805	0.76	+0.1
1,237,534	-		ABZR87_RS05805	0.76	-0.6
1,237,544	+		ABZR87_RS05805	0.77	-1.0
1,237,544	+		ABZR87_RS05805	0.77	+0.4
1,237,545	-		ABZR87_RS05805	0.77	-0.8
1,237,623	+		ABZR87_RS05805	0.82	+0.2
1,237,624	-		ABZR87_RS05805	0.82	+0.2
1,237,669	-		ABZR87_RS05805	0.85	-0.5
1,237,795	-				-0.7
1,237,795	-				-1.0
1,237,822	-				-0.5
1,237,822	-				+0.9
1,237,845	+				-0.8
1,237,845	+				+0.6
1,237,845	+				-0.3
1,237,846	-				+0.3
1,237,846	-				+0.3
1,237,846	-				+0.3
1,237,875	+				+1.6
1,237,875	+				-0.8
1,237,875	+				-0.5
1,237,875	+				+0.8
1,237,876	-				+0.4
1,237,876	-				+0.4
1,237,876	-				+0.9
1,237,882	-				-0.1
1,237,882	-				-1.3
1,237,882	-				-0.5
1,237,882	-				-0.1
1,237,882	-				-0.8
1,237,963	+				+0.0
1,237,963	+				+0.7
1,237,964	-				+0.1
1,237,964	-				-0.4
1,237,980	+				-0.3
1,237,980	+				+0.3
1,237,980	+				+0.6
1,237,981	-				-0.2
1,237,983	+				+1.4
1,237,984	-				-0.1
1,237,984	-				-0.2
1,237,984	-				+0.5
1,238,102	+		ABZR87_RS05810	0.14	+0.6
1,238,102	+		ABZR87_RS05810	0.14	-0.6
1,238,103	-		ABZR87_RS05810	0.14	+0.2
1,238,104	+		ABZR87_RS05810	0.14	+0.6
1,238,104	+		ABZR87_RS05810	0.14	-0.1
1,238,104	+		ABZR87_RS05810	0.14	+0.4
1,238,104	+		ABZR87_RS05810	0.14	+0.7
1,238,104	+		ABZR87_RS05810	0.14	-1.2
1,238,104	+		ABZR87_RS05810	0.14	-0.6
1,238,105	-		ABZR87_RS05810	0.14	-0.2
1,238,105	-		ABZR87_RS05810	0.14	+0.1
1,238,105	-		ABZR87_RS05810	0.14	+0.3
1,238,105	-		ABZR87_RS05810	0.14	-0.1
1,238,105	-		ABZR87_RS05810	0.14	-0.5
1,238,105	-		ABZR87_RS05810	0.14	-0.6
1,238,105	-		ABZR87_RS05810	0.14	-0.1
1,238,105	-		ABZR87_RS05810	0.14	+0.0
1,238,105	-		ABZR87_RS05810	0.14	+0.8
1,238,140	-		ABZR87_RS05810	0.17	+0.5
1,238,140	-		ABZR87_RS05810	0.17	-0.2
1,238,158	+		ABZR87_RS05810	0.18	-0.3
1,238,158	+		ABZR87_RS05810	0.18	+2.3
1,238,703	+		ABZR87_RS05810	0.63	+0.9
1,238,703	+		ABZR87_RS05810	0.63	-0.1
1,238,704	-		ABZR87_RS05810	0.63	+0.6
1,238,810	+		ABZR87_RS05810	0.71	-0.1
1,238,811	-		ABZR87_RS05810	0.71	-2.8
1,238,843	+		ABZR87_RS05810	0.74	-0.7
1,238,843	+		ABZR87_RS05810	0.74	+0.1
1,238,844	-		ABZR87_RS05810	0.74	-1.2
1,238,846	+		ABZR87_RS05810	0.74	-0.4
1,238,898	+		ABZR87_RS05810	0.79	-0.4
1,238,899	-		ABZR87_RS05810	0.79	-0.1
1,238,996	+		ABZR87_RS05810	0.87	-0.5
1,238,996	+		ABZR87_RS05810	0.87	-0.2
1,238,996	+		ABZR87_RS05810	0.87	-0.5
1,238,996	+		ABZR87_RS05810	0.87	-0.1
1,238,997	-		ABZR87_RS05810	0.87	-0.9
1,238,997	-		ABZR87_RS05810	0.87	-0.3
1,238,997	-		ABZR87_RS05810	0.87	+0.9
1,238,997	-		ABZR87_RS05810	0.87	+0.4
1,238,997	-		ABZR87_RS05810	0.87	+1.6
1,238,997	-		ABZR87_RS05810	0.87	-0.1
1,238,997	-		ABZR87_RS05810	0.87	+0.6
1,238,997	-		ABZR87_RS05810	0.87	-0.8
1,238,997	-		ABZR87_RS05810	0.87	+0.4
1,238,997	-		ABZR87_RS05810	0.87	-0.9
1,238,997	-		ABZR87_RS05810	0.87	-0.2
1,238,997	-		ABZR87_RS05810	0.87	-0.7
1,238,997	-		ABZR87_RS05810	0.87	-0.8
1,238,997	-		ABZR87_RS05810	0.87	+0.2
1,239,056	+				+0.5
1,239,057	-				-1.8
1,239,057	-				+0.1
1,239,095	+				-0.8
1,239,096	-				-2.2
1,239,119	+				+0.5
1,239,158	+				-0.2
1,239,158	+				+1.1
1,239,158	+				+0.6
1,239,159	-				-0.5
1,239,193	+				-0.4
1,239,193	+				+0.8
1,239,193	+				+0.1
1,239,193	+				+0.1
1,239,193	+				-0.9
1,239,194	-				-0.5
1,239,194	-				+0.7
1,239,194	-				-0.8
1,239,194	-				-0.7
1,239,194	-				+2.3
1,239,194	-				+0.1
1,239,267	+				+0.7
1,239,272	+				-0.7
1,239,272	+				-0.4
1,239,272	+				-0.4
1,239,273	-				+0.2
1,239,273	-				-0.3
1,239,273	-				+0.4
1,239,276	+				-0.0
1,239,277	-				-0.1
1,239,296	+				-2.8
1,239,296	+				-0.7
1,239,296	+				-0.8
1,239,296	+				-0.4
1,239,296	+				+0.2
1,239,296	+				+1.2
1,239,296	+				+0.2
1,239,296	+				+0.1
1,239,296	+				+0.5
1,239,297	-				+1.9
1,239,297	-				+0.1
1,239,297	-				+0.2
1,239,297	-				-0.5
1,239,297	-				+0.6
1,239,297	-				-0.4
1,239,297	-				+0.3
1,239,297	-				+1.8
1,239,297	-				-0.2
1,239,297	-				+0.0
1,239,478	+		ABZR87_RS05815	0.23	-0.5
1,239,478	+		ABZR87_RS05815	0.23	+0.4
1,239,478	+		ABZR87_RS05815	0.23	+0.2
1,239,478	+		ABZR87_RS05815	0.23	+0.5
1,239,479	-		ABZR87_RS05815	0.23	+0.3
1,239,479	-		ABZR87_RS05815	0.23	+0.6
1,239,479	-		ABZR87_RS05815	0.23	+0.9
1,239,479	-		ABZR87_RS05815	0.23	+1.2
1,239,479	-		ABZR87_RS05815	0.23	+0.2
1,239,514	+		ABZR87_RS05815	0.28	+0.4
1,239,514	+		ABZR87_RS05815	0.28	-0.4
1,239,515	-		ABZR87_RS05815	0.28	+0.3
1,239,548	+		ABZR87_RS05815	0.33	+0.7
1,239,549	-		ABZR87_RS05815	0.33	-0.8
1,239,549	-		ABZR87_RS05815	0.33	-1.3
1,239,549	-		ABZR87_RS05815	0.33	+0.7
1,239,596	+		ABZR87_RS05815	0.39	-0.7
1,239,596	+		ABZR87_RS05815	0.39	-0.6
1,239,736	+		ABZR87_RS05815	0.58	-0.6
1,239,736	+		ABZR87_RS05815	0.58	+0.8
1,239,737	-		ABZR87_RS05815	0.58	-0.4
1,239,737	-		ABZR87_RS05815	0.58	+0.3
1,239,737	-		ABZR87_RS05815	0.58	-0.8
1,239,791	+		ABZR87_RS05815	0.66	+0.5
1,239,791	+		ABZR87_RS05815	0.66	+1.1
1,239,792	-		ABZR87_RS05815	0.66	+0.9
1,239,799	-		ABZR87_RS05815	0.67	+1.3
1,239,799	-		ABZR87_RS05815	0.67	+1.0
1,239,799	-		ABZR87_RS05815	0.67	-0.0
1,239,810	-		ABZR87_RS05815	0.68	-0.5
1,239,810	-		ABZR87_RS05815	0.68	-0.4
1,239,828	+		ABZR87_RS05815	0.71	-0.3
1,239,828	+		ABZR87_RS05815	0.71	+1.2
1,240,002	+				-0.5
1,240,002	+				+0.0
1,240,002	+				+0.5
1,240,003	-				-0.3
1,240,003	-				-0.5
1,240,003	-				-0.6
1,240,028	-				+0.5
1,240,028	-				+1.2
1,240,041	+				-1.0
1,240,041	+				+0.5
1,240,041	+				+0.3
1,240,042	-				+0.5
1,240,042	-				-0.3
1,240,042	-				-0.8
1,240,068	+				+0.9
1,240,068	+				+0.2
1,240,068	+				-0.3
1,240,068	+				-0.3
1,240,068	+				-0.6
1,240,068	+				+0.2
1,240,068	+				+1.5
1,240,069	-				+0.4
1,240,069	-				+1.3
1,240,069	-				+0.4
1,240,069	-				-0.4
1,240,069	-				-0.7
1,240,145	+				+1.7
1,240,146	-				+0.4
1,240,148	+				+0.4
1,240,148	+				-0.2
1,240,148	+				-1.0
1,240,148	+				+0.5
1,240,148	+				-0.8
1,240,148	+				+0.7
1,240,148	+				-0.1
1,240,148	+				-0.1
1,240,149	-				+0.6
1,240,149	-				+0.2
1,240,149	-				+0.4
1,240,149	-				+0.1
1,240,149	-				+0.6
1,240,149	-				+0.4