Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS21010 and ABZR87_RS21015 are separated by 73 nucleotides ABZR87_RS21015 and ABZR87_RS21020 are separated by 34 nucleotides
ABZR87_RS21010: ABZR87_RS21010 - carbonic anhydrase, at 1,099,182 to 1,099,841
_RS21010
ABZR87_RS21015: ABZR87_RS21015 - TIGR01777 family oxidoreductase, at 1,099,915 to 1,100,847
_RS21015
ABZR87_RS21020: ABZR87_RS21020 - cryptochrome/photolyase family protein, at 1,100,882 to 1,102,423
_RS21020
Position (kb)
1099
1100
1101 Strain fitness (log2 ratio)
-2
-1
0
1 at 1098.930 kb on + strand at 1098.931 kb on - strand at 1098.932 kb on + strand at 1098.932 kb on + strand at 1098.932 kb on + strand at 1098.971 kb on + strand at 1099.049 kb on + strand at 1099.050 kb on - strand at 1099.113 kb on + strand at 1099.227 kb on + strand at 1099.228 kb on - strand at 1099.228 kb on - strand at 1099.241 kb on - strand at 1099.390 kb on - strand, within ABZR87_RS21010 at 1099.390 kb on - strand, within ABZR87_RS21010 at 1099.589 kb on + strand, within ABZR87_RS21010 at 1099.590 kb on - strand, within ABZR87_RS21010 at 1099.590 kb on - strand, within ABZR87_RS21010 at 1099.590 kb on - strand, within ABZR87_RS21010 at 1099.725 kb on + strand, within ABZR87_RS21010 at 1099.725 kb on + strand, within ABZR87_RS21010 at 1099.725 kb on + strand, within ABZR87_RS21010 at 1099.726 kb on - strand, within ABZR87_RS21010 at 1099.726 kb on - strand, within ABZR87_RS21010 at 1099.726 kb on - strand, within ABZR87_RS21010 at 1099.883 kb on + strand at 1100.087 kb on - strand, within ABZR87_RS21015 at 1100.218 kb on + strand, within ABZR87_RS21015 at 1100.368 kb on + strand, within ABZR87_RS21015 at 1100.499 kb on - strand, within ABZR87_RS21015 at 1100.599 kb on + strand, within ABZR87_RS21015 at 1100.599 kb on + strand, within ABZR87_RS21015 at 1100.599 kb on + strand, within ABZR87_RS21015 at 1100.599 kb on + strand, within ABZR87_RS21015 at 1100.600 kb on - strand, within ABZR87_RS21015 at 1100.600 kb on - strand, within ABZR87_RS21015 at 1100.600 kb on - strand, within ABZR87_RS21015 at 1100.600 kb on - strand, within ABZR87_RS21015 at 1100.600 kb on - strand, within ABZR87_RS21015 at 1100.600 kb on - strand, within ABZR87_RS21015 at 1100.751 kb on + strand, within ABZR87_RS21015 at 1100.752 kb on - strand, within ABZR87_RS21015 at 1100.864 kb on + strand at 1100.864 kb on + strand at 1100.865 kb on - strand at 1100.885 kb on + strand at 1100.886 kb on - strand at 1101.033 kb on + strand at 1101.033 kb on + strand at 1101.045 kb on + strand, within ABZR87_RS21020 at 1101.045 kb on + strand, within ABZR87_RS21020 at 1101.045 kb on + strand, within ABZR87_RS21020 at 1101.046 kb on - strand, within ABZR87_RS21020 at 1101.046 kb on - strand, within ABZR87_RS21020 at 1101.046 kb on - strand, within ABZR87_RS21020 at 1101.046 kb on - strand, within ABZR87_RS21020 at 1101.102 kb on + strand, within ABZR87_RS21020 at 1101.103 kb on - strand, within ABZR87_RS21020 at 1101.123 kb on + strand, within ABZR87_RS21020 at 1101.141 kb on + strand, within ABZR87_RS21020 at 1101.141 kb on + strand, within ABZR87_RS21020 at 1101.141 kb on + strand, within ABZR87_RS21020 at 1101.141 kb on + strand, within ABZR87_RS21020 at 1101.141 kb on + strand, within ABZR87_RS21020 at 1101.142 kb on - strand, within ABZR87_RS21020 at 1101.142 kb on - strand, within ABZR87_RS21020 at 1101.194 kb on - strand, within ABZR87_RS21020 at 1101.194 kb on - strand, within ABZR87_RS21020 at 1101.459 kb on + strand, within ABZR87_RS21020 at 1101.460 kb on - strand, within ABZR87_RS21020 at 1101.470 kb on + strand, within ABZR87_RS21020 at 1101.471 kb on - strand, within ABZR87_RS21020 at 1101.471 kb on - strand, within ABZR87_RS21020 at 1101.471 kb on - strand, within ABZR87_RS21020 at 1101.474 kb on + strand, within ABZR87_RS21020 at 1101.474 kb on + strand, within ABZR87_RS21020 at 1101.474 kb on + strand, within ABZR87_RS21020 at 1101.475 kb on - strand, within ABZR87_RS21020 at 1101.544 kb on - strand, within ABZR87_RS21020
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,098,930 + +0.5 1,098,931 - -0.2 1,098,932 + +1.0 1,098,932 + -0.1 1,098,932 + +1.0 1,098,971 + +0.7 1,099,049 + +0.5 1,099,050 - +0.3 1,099,113 + +0.1 1,099,227 + -2.6 1,099,228 - -0.1 1,099,228 - +0.5 1,099,241 - +0.1 1,099,390 - ABZR87_RS21010 0.32 -0.1 1,099,390 - ABZR87_RS21010 0.32 -0.5 1,099,589 + ABZR87_RS21010 0.62 -0.1 1,099,590 - ABZR87_RS21010 0.62 -1.0 1,099,590 - ABZR87_RS21010 0.62 -0.5 1,099,590 - ABZR87_RS21010 0.62 -0.9 1,099,725 + ABZR87_RS21010 0.82 -0.8 1,099,725 + ABZR87_RS21010 0.82 -1.0 1,099,725 + ABZR87_RS21010 0.82 -0.1 1,099,726 - ABZR87_RS21010 0.82 +0.1 1,099,726 - ABZR87_RS21010 0.82 -1.8 1,099,726 - ABZR87_RS21010 0.82 -0.3 1,099,883 + +0.4 1,100,087 - ABZR87_RS21015 0.18 +0.2 1,100,218 + ABZR87_RS21015 0.32 +0.6 1,100,368 + ABZR87_RS21015 0.49 +0.9 1,100,499 - ABZR87_RS21015 0.63 +0.9 1,100,599 + ABZR87_RS21015 0.73 +0.2 1,100,599 + ABZR87_RS21015 0.73 +0.1 1,100,599 + ABZR87_RS21015 0.73 +1.2 1,100,599 + ABZR87_RS21015 0.73 -0.7 1,100,600 - ABZR87_RS21015 0.73 +0.9 1,100,600 - ABZR87_RS21015 0.73 +0.7 1,100,600 - ABZR87_RS21015 0.73 -1.1 1,100,600 - ABZR87_RS21015 0.73 -0.3 1,100,600 - ABZR87_RS21015 0.73 +0.8 1,100,600 - ABZR87_RS21015 0.73 +0.6 1,100,751 + ABZR87_RS21015 0.90 +0.3 1,100,752 - ABZR87_RS21015 0.90 -0.2 1,100,864 + -0.5 1,100,864 + -1.4 1,100,865 - -0.7 1,100,885 + -0.1 1,100,886 - +0.3 1,101,033 + +0.9 1,101,033 + +0.2 1,101,045 + ABZR87_RS21020 0.11 +0.9 1,101,045 + ABZR87_RS21020 0.11 -0.0 1,101,045 + ABZR87_RS21020 0.11 -0.2 1,101,046 - ABZR87_RS21020 0.11 +0.5 1,101,046 - ABZR87_RS21020 0.11 -0.6 1,101,046 - ABZR87_RS21020 0.11 +0.9 1,101,046 - ABZR87_RS21020 0.11 +0.9 1,101,102 + ABZR87_RS21020 0.14 +0.9 1,101,103 - ABZR87_RS21020 0.14 -0.1 1,101,123 + ABZR87_RS21020 0.16 +0.9 1,101,141 + ABZR87_RS21020 0.17 +0.0 1,101,141 + ABZR87_RS21020 0.17 -0.9 1,101,141 + ABZR87_RS21020 0.17 +0.1 1,101,141 + ABZR87_RS21020 0.17 +1.6 1,101,141 + ABZR87_RS21020 0.17 -0.4 1,101,142 - ABZR87_RS21020 0.17 -1.4 1,101,142 - ABZR87_RS21020 0.17 -0.6 1,101,194 - ABZR87_RS21020 0.20 +0.6 1,101,194 - ABZR87_RS21020 0.20 +0.1 1,101,459 + ABZR87_RS21020 0.37 +0.4 1,101,460 - ABZR87_RS21020 0.37 -0.3 1,101,470 + ABZR87_RS21020 0.38 +0.3 1,101,471 - ABZR87_RS21020 0.38 +0.5 1,101,471 - ABZR87_RS21020 0.38 +0.4 1,101,471 - ABZR87_RS21020 0.38 +0.2 1,101,474 + ABZR87_RS21020 0.38 -0.1 1,101,474 + ABZR87_RS21020 0.38 -0.2 1,101,474 + ABZR87_RS21020 0.38 -0.1 1,101,475 - ABZR87_RS21020 0.38 -0.2 1,101,544 - ABZR87_RS21020 0.43 +0.4
Or see this region's nucleotide sequence