Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS14305 and ABZR87_RS14310 overlap by 4 nucleotides ABZR87_RS14310 and ABZR87_RS14315 are separated by 73 nucleotides ABZR87_RS14315 and ABZR87_RS14320 overlap by 4 nucleotides ABZR87_RS14320 and ABZR87_RS14325 are separated by 181 nucleotides ABZR87_RS14325 and ABZR87_RS14330 are separated by 141 nucleotides
ABZR87_RS14305: ABZR87_RS14305 - acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein, at 3,020,475 to 3,022,355
_RS14305
ABZR87_RS14310: ABZR87_RS14310 - peroxidase-related enzyme, at 3,022,352 to 3,022,942
_RS14310
ABZR87_RS14315: ABZR87_RS14315 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 3,023,016 to 3,025,313
_RS14315
ABZR87_RS14320: ABZR87_RS14320 - (2Fe-2S)-binding protein, at 3,025,310 to 3,025,777
_RS14320
ABZR87_RS14325: ABZR87_RS14325 - tRNA-Ser, at 3,025,959 to 3,026,049
_RS14325
ABZR87_RS14330: ABZR87_RS14330 - hypothetical protein, at 3,026,191 to 3,026,472
_RS14330
Position (kb)
3023
3024
3025
3026 Strain fitness (log2 ratio)
-1
0
1 at 3022.035 kb on + strand, within ABZR87_RS14305 at 3022.036 kb on - strand, within ABZR87_RS14305 at 3022.036 kb on - strand, within ABZR87_RS14305 at 3022.055 kb on + strand, within ABZR87_RS14305 at 3022.496 kb on + strand, within ABZR87_RS14310 at 3022.497 kb on - strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.566 kb on - strand, within ABZR87_RS14310 at 3022.566 kb on - strand, within ABZR87_RS14310 at 3022.566 kb on - strand, within ABZR87_RS14310 at 3022.797 kb on + strand, within ABZR87_RS14310 at 3022.863 kb on + strand, within ABZR87_RS14310 at 3022.863 kb on + strand, within ABZR87_RS14310 at 3023.129 kb on + strand at 3023.611 kb on + strand, within ABZR87_RS14315 at 3023.612 kb on - strand, within ABZR87_RS14315 at 3023.726 kb on - strand, within ABZR87_RS14315 at 3023.869 kb on + strand, within ABZR87_RS14315 at 3023.870 kb on - strand, within ABZR87_RS14315 at 3023.870 kb on - strand, within ABZR87_RS14315 at 3024.172 kb on + strand, within ABZR87_RS14315 at 3024.374 kb on - strand, within ABZR87_RS14315 at 3024.374 kb on - strand, within ABZR87_RS14315 at 3024.436 kb on + strand, within ABZR87_RS14315 at 3024.437 kb on - strand, within ABZR87_RS14315 at 3024.523 kb on + strand, within ABZR87_RS14315 at 3024.523 kb on + strand, within ABZR87_RS14315 at 3024.523 kb on + strand, within ABZR87_RS14315 at 3024.524 kb on - strand, within ABZR87_RS14315 at 3024.524 kb on - strand, within ABZR87_RS14315 at 3024.524 kb on - strand, within ABZR87_RS14315 at 3024.665 kb on + strand, within ABZR87_RS14315 at 3024.988 kb on + strand, within ABZR87_RS14315 at 3024.988 kb on + strand, within ABZR87_RS14315 at 3024.988 kb on + strand, within ABZR87_RS14315 at 3024.989 kb on - strand, within ABZR87_RS14315 at 3024.989 kb on - strand, within ABZR87_RS14315 at 3024.989 kb on - strand, within ABZR87_RS14315 at 3024.989 kb on - strand, within ABZR87_RS14315 at 3025.637 kb on + strand, within ABZR87_RS14320 at 3025.638 kb on - strand, within ABZR87_RS14320 at 3025.638 kb on - strand, within ABZR87_RS14320 at 3025.793 kb on + strand at 3025.825 kb on + strand at 3025.825 kb on + strand at 3025.826 kb on - strand at 3025.826 kb on - strand at 3025.826 kb on - strand at 3025.851 kb on + strand at 3025.852 kb on - strand at 3025.852 kb on - strand at 3025.852 kb on - strand at 3025.925 kb on + strand at 3025.926 kb on - strand at 3025.942 kb on + strand at 3026.235 kb on + strand, within ABZR87_RS14330
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,022,035 + ABZR87_RS14305 0.83 -0.8 3,022,036 - ABZR87_RS14305 0.83 +0.7 3,022,036 - ABZR87_RS14305 0.83 +0.0 3,022,055 + ABZR87_RS14305 0.84 -1.7 3,022,496 + ABZR87_RS14310 0.24 -0.1 3,022,497 - ABZR87_RS14310 0.25 +0.8 3,022,565 + ABZR87_RS14310 0.36 -0.7 3,022,565 + ABZR87_RS14310 0.36 -0.4 3,022,565 + ABZR87_RS14310 0.36 +0.0 3,022,565 + ABZR87_RS14310 0.36 +0.0 3,022,566 - ABZR87_RS14310 0.36 -0.3 3,022,566 - ABZR87_RS14310 0.36 -0.8 3,022,566 - ABZR87_RS14310 0.36 -0.1 3,022,797 + ABZR87_RS14310 0.75 +0.3 3,022,863 + ABZR87_RS14310 0.86 -0.5 3,022,863 + ABZR87_RS14310 0.86 +0.3 3,023,129 + -0.1 3,023,611 + ABZR87_RS14315 0.26 -0.3 3,023,612 - ABZR87_RS14315 0.26 -0.4 3,023,726 - ABZR87_RS14315 0.31 +0.8 3,023,869 + ABZR87_RS14315 0.37 +0.2 3,023,870 - ABZR87_RS14315 0.37 +1.5 3,023,870 - ABZR87_RS14315 0.37 +0.6 3,024,172 + ABZR87_RS14315 0.50 +0.9 3,024,374 - ABZR87_RS14315 0.59 +0.2 3,024,374 - ABZR87_RS14315 0.59 -0.1 3,024,436 + ABZR87_RS14315 0.62 +0.1 3,024,437 - ABZR87_RS14315 0.62 +0.7 3,024,523 + ABZR87_RS14315 0.66 -0.0 3,024,523 + ABZR87_RS14315 0.66 -0.1 3,024,523 + ABZR87_RS14315 0.66 +0.8 3,024,524 - ABZR87_RS14315 0.66 +0.4 3,024,524 - ABZR87_RS14315 0.66 -0.2 3,024,524 - ABZR87_RS14315 0.66 -0.5 3,024,665 + ABZR87_RS14315 0.72 +0.6 3,024,988 + ABZR87_RS14315 0.86 +0.9 3,024,988 + ABZR87_RS14315 0.86 +0.8 3,024,988 + ABZR87_RS14315 0.86 -0.1 3,024,989 - ABZR87_RS14315 0.86 -0.7 3,024,989 - ABZR87_RS14315 0.86 +0.1 3,024,989 - ABZR87_RS14315 0.86 -0.1 3,024,989 - ABZR87_RS14315 0.86 +0.0 3,025,637 + ABZR87_RS14320 0.70 -0.2 3,025,638 - ABZR87_RS14320 0.70 -0.3 3,025,638 - ABZR87_RS14320 0.70 -0.2 3,025,793 + +0.7 3,025,825 + -1.2 3,025,825 + +0.4 3,025,826 - +0.9 3,025,826 - +1.0 3,025,826 - +0.2 3,025,851 + +0.8 3,025,852 - +0.2 3,025,852 - -0.3 3,025,852 - +0.9 3,025,925 + +0.2 3,025,926 - +0.0 3,025,942 + +0.6 3,026,235 + ABZR87_RS14330 0.16 -1.2
Or see this region's nucleotide sequence