Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03700 and ABZR87_RS03705 are separated by 1 nucleotides ABZR87_RS03705 and ABZR87_RS03710 are separated by 313 nucleotides ABZR87_RS03710 and ABZR87_RS03715 are separated by 91 nucleotides ABZR87_RS03715 and ABZR87_RS03720 are separated by 46 nucleotides
ABZR87_RS03700: ABZR87_RS03700 - RNA polymerase sigma factor, at 770,282 to 770,839
_RS03700
ABZR87_RS03705: ABZR87_RS03705 - DUF2892 domain-containing protein, at 770,841 to 771,050
_RS03705
ABZR87_RS03710: ABZR87_RS03710 - Hsp70 family protein, at 771,364 to 772,617
_RS03710
ABZR87_RS03715: ABZR87_RS03715 - NADPH-dependent FMN reductase, at 772,709 to 773,275
_RS03715
ABZR87_RS03720: ABZR87_RS03720 - hypothetical protein, at 773,322 to 773,690
_RS03720
Position (kb) 771
772
773 Strain fitness (log2 ratio) -2
-1
0
1
2 at 770.399 kb on + strand, within ABZR87_RS03700 at 770.399 kb on + strand, within ABZR87_RS03700 at 770.399 kb on + strand, within ABZR87_RS03700 at 770.399 kb on + strand, within ABZR87_RS03700 at 770.400 kb on - strand, within ABZR87_RS03700 at 770.400 kb on - strand, within ABZR87_RS03700 at 770.400 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.556 kb on + strand, within ABZR87_RS03700 at 770.556 kb on + strand, within ABZR87_RS03700 at 770.556 kb on + strand, within ABZR87_RS03700 at 770.557 kb on - strand, within ABZR87_RS03700 at 770.584 kb on + strand, within ABZR87_RS03700 at 770.585 kb on - strand, within ABZR87_RS03700 at 770.621 kb on + strand, within ABZR87_RS03700 at 770.622 kb on - strand, within ABZR87_RS03700 at 770.622 kb on - strand, within ABZR87_RS03700 at 770.652 kb on - strand, within ABZR87_RS03700 at 770.671 kb on - strand, within ABZR87_RS03700 at 770.747 kb on + strand, within ABZR87_RS03700 at 770.747 kb on + strand, within ABZR87_RS03700 at 770.795 kb on - strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.850 kb on + strand at 770.851 kb on - strand at 770.972 kb on + strand, within ABZR87_RS03705 at 770.973 kb on - strand, within ABZR87_RS03705 at 771.043 kb on + strand at 771.043 kb on + strand at 771.043 kb on + strand at 771.043 kb on + strand at 771.044 kb on - strand at 771.044 kb on - strand at 771.044 kb on - strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.088 kb on + strand at 771.088 kb on + strand at 771.088 kb on + strand at 771.088 kb on + strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.125 kb on + strand at 771.129 kb on + strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.275 kb on + strand at 771.275 kb on + strand at 771.275 kb on + strand at 771.276 kb on - strand at 771.276 kb on - strand at 771.276 kb on - strand at 771.276 kb on - strand at 771.276 kb on - strand at 771.280 kb on + strand at 771.280 kb on + strand at 771.280 kb on + strand at 771.280 kb on + strand at 771.281 kb on - strand at 771.314 kb on + strand at 771.363 kb on + strand at 771.363 kb on + strand at 771.363 kb on + strand at 771.363 kb on + strand at 771.363 kb on + strand at 771.364 kb on - strand at 771.364 kb on - strand at 771.364 kb on - strand at 771.517 kb on + strand, within ABZR87_RS03710 at 771.517 kb on + strand, within ABZR87_RS03710 at 771.518 kb on - strand, within ABZR87_RS03710 at 771.541 kb on + strand, within ABZR87_RS03710 at 771.541 kb on + strand, within ABZR87_RS03710 at 771.542 kb on - strand, within ABZR87_RS03710 at 771.554 kb on - strand, within ABZR87_RS03710 at 771.839 kb on - strand, within ABZR87_RS03710 at 771.839 kb on - strand, within ABZR87_RS03710 at 771.865 kb on + strand, within ABZR87_RS03710 at 771.865 kb on + strand, within ABZR87_RS03710 at 771.866 kb on - strand, within ABZR87_RS03710 at 771.921 kb on + strand, within ABZR87_RS03710 at 771.922 kb on - strand, within ABZR87_RS03710 at 771.922 kb on - strand, within ABZR87_RS03710 at 772.064 kb on + strand, within ABZR87_RS03710 at 772.117 kb on + strand, within ABZR87_RS03710 at 772.118 kb on - strand, within ABZR87_RS03710 at 772.156 kb on + strand, within ABZR87_RS03710 at 772.156 kb on + strand, within ABZR87_RS03710 at 772.156 kb on + strand, within ABZR87_RS03710 at 772.157 kb on - strand, within ABZR87_RS03710 at 772.157 kb on - strand, within ABZR87_RS03710 at 772.157 kb on - strand, within ABZR87_RS03710 at 772.157 kb on - strand, within ABZR87_RS03710 at 772.157 kb on - strand, within ABZR87_RS03710 at 772.193 kb on - strand, within ABZR87_RS03710 at 772.193 kb on - strand, within ABZR87_RS03710 at 772.193 kb on - strand, within ABZR87_RS03710 at 772.193 kb on - strand, within ABZR87_RS03710 at 772.193 kb on - strand, within ABZR87_RS03710 at 772.193 kb on - strand, within ABZR87_RS03710 at 772.468 kb on - strand, within ABZR87_RS03710 at 772.695 kb on + strand at 772.764 kb on + strand at 772.765 kb on - strand at 772.765 kb on - strand at 772.793 kb on - strand, within ABZR87_RS03715 at 772.806 kb on + strand, within ABZR87_RS03715 at 772.807 kb on - strand, within ABZR87_RS03715 at 772.812 kb on + strand, within ABZR87_RS03715 at 772.812 kb on + strand, within ABZR87_RS03715 at 772.812 kb on + strand, within ABZR87_RS03715 at 772.812 kb on + strand, within ABZR87_RS03715 at 772.812 kb on + strand, within ABZR87_RS03715 at 772.812 kb on + strand, within ABZR87_RS03715 at 772.812 kb on + strand, within ABZR87_RS03715 at 772.813 kb on - strand, within ABZR87_RS03715 at 772.813 kb on - strand, within ABZR87_RS03715 at 772.813 kb on - strand, within ABZR87_RS03715 at 772.924 kb on + strand, within ABZR87_RS03715 at 772.924 kb on + strand, within ABZR87_RS03715 at 772.924 kb on + strand, within ABZR87_RS03715 at 772.924 kb on + strand, within ABZR87_RS03715 at 772.925 kb on - strand, within ABZR87_RS03715 at 772.925 kb on - strand, within ABZR87_RS03715 at 772.925 kb on - strand, within ABZR87_RS03715 at 772.925 kb on - strand, within ABZR87_RS03715 at 772.925 kb on - strand, within ABZR87_RS03715 at 772.925 kb on - strand, within ABZR87_RS03715 at 772.941 kb on - strand, within ABZR87_RS03715 at 772.941 kb on - strand, within ABZR87_RS03715 at 773.323 kb on + strand at 773.323 kb on + strand at 773.324 kb on - strand at 773.324 kb on - strand at 773.324 kb on - strand at 773.324 kb on - strand at 773.333 kb on - strand at 773.333 kb on - strand at 773.346 kb on + strand at 773.347 kb on - strand at 773.355 kb on + strand at 773.355 kb on + strand at 773.355 kb on + strand at 773.355 kb on + strand at 773.355 kb on + strand at 773.355 kb on + strand at 773.355 kb on + strand at 773.356 kb on - strand at 773.356 kb on - strand at 773.356 kb on - strand at 773.356 kb on - strand at 773.356 kb on - strand at 773.358 kb on + strand at 773.358 kb on + strand at 773.358 kb on + strand at 773.358 kb on + strand at 773.358 kb on + strand at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.359 kb on - strand, within ABZR87_RS03720 at 773.406 kb on + strand, within ABZR87_RS03720 at 773.406 kb on + strand, within ABZR87_RS03720 at 773.406 kb on + strand, within ABZR87_RS03720 at 773.406 kb on + strand, within ABZR87_RS03720 at 773.407 kb on - strand, within ABZR87_RS03720 at 773.410 kb on + strand, within ABZR87_RS03720 at 773.410 kb on + strand, within ABZR87_RS03720 at 773.411 kb on - strand, within ABZR87_RS03720 at 773.411 kb on - strand, within ABZR87_RS03720 at 773.411 kb on - strand, within ABZR87_RS03720 at 773.411 kb on - strand, within ABZR87_RS03720 at 773.429 kb on + strand, within ABZR87_RS03720 at 773.429 kb on + strand, within ABZR87_RS03720 at 773.441 kb on + strand, within ABZR87_RS03720 at 773.441 kb on + strand, within ABZR87_RS03720 at 773.441 kb on + strand, within ABZR87_RS03720 at 773.578 kb on + strand, within ABZR87_RS03720 at 773.582 kb on + strand, within ABZR87_RS03720 at 773.582 kb on + strand, within ABZR87_RS03720
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 770,399 + ABZR87_RS03700 0.21 -0.3 770,399 + ABZR87_RS03700 0.21 +1.9 770,399 + ABZR87_RS03700 0.21 -0.2 770,399 + ABZR87_RS03700 0.21 +0.1 770,400 - ABZR87_RS03700 0.21 -0.8 770,400 - ABZR87_RS03700 0.21 -0.5 770,400 - ABZR87_RS03700 0.21 -0.3 770,464 - ABZR87_RS03700 0.33 +0.3 770,464 - ABZR87_RS03700 0.33 -0.2 770,464 - ABZR87_RS03700 0.33 +1.5 770,464 - ABZR87_RS03700 0.33 +0.9 770,464 - ABZR87_RS03700 0.33 -1.3 770,464 - ABZR87_RS03700 0.33 -0.1 770,464 - ABZR87_RS03700 0.33 -0.6 770,556 + ABZR87_RS03700 0.49 +0.5 770,556 + ABZR87_RS03700 0.49 +0.4 770,556 + ABZR87_RS03700 0.49 -0.1 770,557 - ABZR87_RS03700 0.49 +0.1 770,584 + ABZR87_RS03700 0.54 -0.5 770,585 - ABZR87_RS03700 0.54 -1.3 770,621 + ABZR87_RS03700 0.61 -0.5 770,622 - ABZR87_RS03700 0.61 -0.5 770,622 - ABZR87_RS03700 0.61 +0.8 770,652 - ABZR87_RS03700 0.66 -0.1 770,671 - ABZR87_RS03700 0.70 -0.2 770,747 + ABZR87_RS03700 0.83 +0.1 770,747 + ABZR87_RS03700 0.83 +1.0 770,795 - -1.5 770,815 + +1.3 770,815 + +0.8 770,815 + +0.3 770,815 + +1.7 770,815 + +0.0 770,815 + -0.0 770,815 + -0.4 770,816 - +0.5 770,816 - +0.4 770,816 - -0.2 770,816 - +0.2 770,816 - +0.3 770,850 + +0.0 770,851 - +1.5 770,972 + ABZR87_RS03705 0.62 +1.3 770,973 - ABZR87_RS03705 0.63 +0.5 771,043 + -0.3 771,043 + +0.4 771,043 + -0.0 771,043 + +0.7 771,044 - -0.4 771,044 - -1.0 771,044 - -0.2 771,050 + +0.5 771,050 + +0.7 771,050 + +1.0 771,050 + -0.1 771,050 + +0.7 771,050 + +1.0 771,050 + -0.6 771,050 + +0.5 771,050 + +0.9 771,050 + -0.4 771,051 - -0.6 771,051 - -0.3 771,051 - +1.0 771,051 - -0.9 771,051 - +0.0 771,051 - -0.1 771,051 - +0.2 771,051 - -1.9 771,051 - +1.9 771,051 - +0.5 771,088 + -0.0 771,088 + -0.1 771,088 + +0.3 771,088 + -0.3 771,089 - -0.3 771,089 - +0.2 771,089 - +0.5 771,089 - +0.3 771,089 - +1.0 771,089 - +0.9 771,125 + -0.2 771,129 + +0.4 771,130 - -1.0 771,130 - +0.2 771,130 - -0.3 771,130 - -0.1 771,130 - -1.1 771,152 + +0.0 771,152 + -0.3 771,152 + +0.3 771,152 + +0.4 771,152 + -0.5 771,152 + -0.3 771,152 + +0.1 771,152 + +0.1 771,152 + -0.4 771,152 + +0.4 771,152 + +0.8 771,153 - -0.1 771,153 - -0.1 771,153 - +0.2 771,153 - +0.1 771,153 - +0.5 771,153 - -0.2 771,153 - -0.4 771,153 - -0.2 771,153 - +1.5 771,153 - +0.6 771,153 - -0.9 771,153 - +0.8 771,153 - +0.2 771,153 - -0.2 771,153 - -0.2 771,198 + +0.1 771,198 + +0.7 771,198 + -0.2 771,198 + -2.6 771,198 + -1.0 771,199 - +0.0 771,199 - -0.8 771,199 - +0.0 771,199 - -0.4 771,199 - +0.0 771,199 - +1.5 771,275 + -0.3 771,275 + -0.2 771,275 + -0.2 771,276 - +0.3 771,276 - +0.2 771,276 - +0.1 771,276 - +0.5 771,276 - -1.1 771,280 + +0.2 771,280 + -1.0 771,280 + +0.2 771,280 + +0.3 771,281 - -0.3 771,314 + +0.3 771,363 + -0.4 771,363 + -0.0 771,363 + -0.4 771,363 + -0.9 771,363 + -0.7 771,364 - +0.1 771,364 - +0.8 771,364 - -0.8 771,517 + ABZR87_RS03710 0.12 +0.0 771,517 + ABZR87_RS03710 0.12 +0.3 771,518 - ABZR87_RS03710 0.12 +0.4 771,541 + ABZR87_RS03710 0.14 +0.3 771,541 + ABZR87_RS03710 0.14 -0.6 771,542 - ABZR87_RS03710 0.14 -0.1 771,554 - ABZR87_RS03710 0.15 -1.5 771,839 - ABZR87_RS03710 0.38 +0.1 771,839 - ABZR87_RS03710 0.38 -1.5 771,865 + ABZR87_RS03710 0.40 +0.2 771,865 + ABZR87_RS03710 0.40 -0.2 771,866 - ABZR87_RS03710 0.40 +0.1 771,921 + ABZR87_RS03710 0.44 +0.0 771,922 - ABZR87_RS03710 0.44 +1.0 771,922 - ABZR87_RS03710 0.44 +0.3 772,064 + ABZR87_RS03710 0.56 +0.6 772,117 + ABZR87_RS03710 0.60 +0.3 772,118 - ABZR87_RS03710 0.60 -0.0 772,156 + ABZR87_RS03710 0.63 +1.3 772,156 + ABZR87_RS03710 0.63 -2.2 772,156 + ABZR87_RS03710 0.63 -1.3 772,157 - ABZR87_RS03710 0.63 +0.7 772,157 - ABZR87_RS03710 0.63 +0.3 772,157 - ABZR87_RS03710 0.63 -1.1 772,157 - ABZR87_RS03710 0.63 +0.3 772,157 - ABZR87_RS03710 0.63 +0.3 772,193 - ABZR87_RS03710 0.66 +1.8 772,193 - ABZR87_RS03710 0.66 -0.2 772,193 - ABZR87_RS03710 0.66 -0.2 772,193 - ABZR87_RS03710 0.66 +0.7 772,193 - ABZR87_RS03710 0.66 -1.5 772,193 - ABZR87_RS03710 0.66 +0.6 772,468 - ABZR87_RS03710 0.88 +1.0 772,695 + -0.2 772,764 + -1.3 772,765 - -0.4 772,765 - +0.2 772,793 - ABZR87_RS03715 0.15 -2.0 772,806 + ABZR87_RS03715 0.17 +0.6 772,807 - ABZR87_RS03715 0.17 +0.2 772,812 + ABZR87_RS03715 0.18 +0.2 772,812 + ABZR87_RS03715 0.18 -0.7 772,812 + ABZR87_RS03715 0.18 +0.8 772,812 + ABZR87_RS03715 0.18 +0.1 772,812 + ABZR87_RS03715 0.18 -0.3 772,812 + ABZR87_RS03715 0.18 +0.0 772,812 + ABZR87_RS03715 0.18 -0.0 772,813 - ABZR87_RS03715 0.18 +0.7 772,813 - ABZR87_RS03715 0.18 +2.1 772,813 - ABZR87_RS03715 0.18 -0.2 772,924 + ABZR87_RS03715 0.38 +1.3 772,924 + ABZR87_RS03715 0.38 -1.5 772,924 + ABZR87_RS03715 0.38 -0.2 772,924 + ABZR87_RS03715 0.38 -0.2 772,925 - ABZR87_RS03715 0.38 +0.6 772,925 - ABZR87_RS03715 0.38 +0.5 772,925 - ABZR87_RS03715 0.38 +0.0 772,925 - ABZR87_RS03715 0.38 -1.2 772,925 - ABZR87_RS03715 0.38 +0.5 772,925 - ABZR87_RS03715 0.38 +0.9 772,941 - ABZR87_RS03715 0.41 -1.0 772,941 - ABZR87_RS03715 0.41 +0.3 773,323 + -1.3 773,323 + -0.2 773,324 - +0.5 773,324 - -0.8 773,324 - -0.2 773,324 - -0.2 773,333 - +0.2 773,333 - +0.1 773,346 + -1.0 773,347 - -0.0 773,355 + +0.9 773,355 + +0.2 773,355 + +0.5 773,355 + +0.2 773,355 + +1.1 773,355 + -0.0 773,355 + +0.0 773,356 - -1.0 773,356 - +0.7 773,356 - +0.1 773,356 - -0.4 773,356 - +0.8 773,358 + +0.1 773,358 + -0.2 773,358 + -0.9 773,358 + +0.1 773,358 + +0.7 773,359 - ABZR87_RS03720 0.10 -0.5 773,359 - ABZR87_RS03720 0.10 +0.2 773,359 - ABZR87_RS03720 0.10 +1.7 773,359 - ABZR87_RS03720 0.10 +0.3 773,359 - ABZR87_RS03720 0.10 -0.6 773,359 - ABZR87_RS03720 0.10 +0.9 773,359 - ABZR87_RS03720 0.10 -0.7 773,359 - ABZR87_RS03720 0.10 +0.7 773,359 - ABZR87_RS03720 0.10 +0.1 773,406 + ABZR87_RS03720 0.23 -0.5 773,406 + ABZR87_RS03720 0.23 -1.9 773,406 + ABZR87_RS03720 0.23 +0.3 773,406 + ABZR87_RS03720 0.23 +0.0 773,407 - ABZR87_RS03720 0.23 -2.5 773,410 + ABZR87_RS03720 0.24 -0.9 773,410 + ABZR87_RS03720 0.24 +0.4 773,411 - ABZR87_RS03720 0.24 +0.9 773,411 - ABZR87_RS03720 0.24 -0.1 773,411 - ABZR87_RS03720 0.24 -1.6 773,411 - ABZR87_RS03720 0.24 -0.5 773,429 + ABZR87_RS03720 0.29 -0.1 773,429 + ABZR87_RS03720 0.29 -0.5 773,441 + ABZR87_RS03720 0.32 -0.1 773,441 + ABZR87_RS03720 0.32 -0.1 773,441 + ABZR87_RS03720 0.32 -0.2 773,578 + ABZR87_RS03720 0.69 -0.4 773,582 + ABZR87_RS03720 0.70 +0.1 773,582 + ABZR87_RS03720 0.70 +0.2
Or see this region's nucleotide sequence