Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS02910

Experiment: acetate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS02905 and ABZR87_RS02910 are separated by 8 nucleotidesABZR87_RS02910 and ABZR87_RS02915 overlap by 4 nucleotides ABZR87_RS02905: ABZR87_RS02905 - alpha-2-macroglobulin, at 603,300 to 608,084 _RS02905 ABZR87_RS02910: ABZR87_RS02910 - DUF1175 family protein, at 608,093 to 608,797 _RS02910 ABZR87_RS02915: ABZR87_RS02915 - DUF2138 domain-containing protein, at 608,794 to 610,623 _RS02915 Position (kb) 608 609Strain fitness (log2 ratio) -2 -1 0 1at 607.129 kb on + strand, within ABZR87_RS02905at 607.130 kb on - strand, within ABZR87_RS02905at 607.130 kb on - strand, within ABZR87_RS02905at 607.130 kb on - strand, within ABZR87_RS02905at 607.130 kb on - strand, within ABZR87_RS02905at 607.130 kb on - strand, within ABZR87_RS02905at 607.203 kb on + strand, within ABZR87_RS02905at 607.203 kb on + strand, within ABZR87_RS02905at 607.203 kb on + strand, within ABZR87_RS02905at 607.204 kb on - strand, within ABZR87_RS02905at 607.332 kb on - strand, within ABZR87_RS02905at 607.332 kb on - strand, within ABZR87_RS02905at 607.369 kb on + strand, within ABZR87_RS02905at 607.369 kb on + strand, within ABZR87_RS02905at 607.369 kb on + strand, within ABZR87_RS02905at 607.369 kb on + strand, within ABZR87_RS02905at 607.369 kb on + strand, within ABZR87_RS02905at 607.369 kb on + strand, within ABZR87_RS02905at 607.370 kb on - strand, within ABZR87_RS02905at 607.370 kb on - strand, within ABZR87_RS02905at 607.370 kb on - strand, within ABZR87_RS02905at 607.370 kb on - strand, within ABZR87_RS02905at 607.370 kb on - strand, within ABZR87_RS02905at 607.370 kb on - strand, within ABZR87_RS02905at 607.370 kb on - strand, within ABZR87_RS02905at 607.522 kb on + strand, within ABZR87_RS02905at 607.522 kb on + strand, within ABZR87_RS02905at 607.523 kb on - strand, within ABZR87_RS02905at 607.523 kb on - strand, within ABZR87_RS02905at 607.541 kb on - strand, within ABZR87_RS02905at 607.541 kb on - strand, within ABZR87_RS02905at 607.690 kb on + strandat 607.690 kb on + strandat 607.690 kb on + strandat 607.691 kb on - strandat 607.691 kb on - strandat 607.723 kb on + strandat 607.723 kb on + strandat 607.723 kb on + strandat 607.723 kb on + strandat 607.724 kb on - strandat 607.724 kb on - strandat 607.724 kb on - strandat 607.795 kb on + strandat 607.796 kb on - strandat 607.840 kb on + strandat 607.840 kb on + strandat 607.841 kb on - strandat 607.841 kb on - strandat 607.841 kb on - strandat 607.891 kb on + strandat 607.891 kb on + strandat 607.892 kb on - strandat 607.892 kb on - strandat 607.954 kb on - strandat 608.242 kb on - strand, within ABZR87_RS02910at 608.250 kb on + strand, within ABZR87_RS02910at 608.250 kb on + strand, within ABZR87_RS02910at 608.250 kb on + strand, within ABZR87_RS02910at 608.251 kb on - strand, within ABZR87_RS02910at 608.251 kb on - strand, within ABZR87_RS02910at 608.251 kb on - strand, within ABZR87_RS02910at 608.382 kb on + strand, within ABZR87_RS02910at 608.382 kb on + strand, within ABZR87_RS02910at 608.382 kb on + strand, within ABZR87_RS02910at 608.382 kb on + strand, within ABZR87_RS02910at 608.382 kb on + strand, within ABZR87_RS02910at 608.382 kb on + strand, within ABZR87_RS02910at 608.382 kb on + strand, within ABZR87_RS02910at 608.383 kb on - strand, within ABZR87_RS02910at 608.383 kb on - strand, within ABZR87_RS02910at 608.383 kb on - strand, within ABZR87_RS02910at 608.662 kb on + strand, within ABZR87_RS02910at 608.663 kb on - strand, within ABZR87_RS02910at 608.714 kb on + strand, within ABZR87_RS02910at 608.714 kb on + strand, within ABZR87_RS02910at 608.715 kb on - strand, within ABZR87_RS02910at 608.715 kb on - strand, within ABZR87_RS02910at 608.715 kb on - strand, within ABZR87_RS02910at 608.715 kb on - strand, within ABZR87_RS02910at 608.715 kb on - strand, within ABZR87_RS02910at 608.971 kb on + strandat 609.150 kb on + strand, within ABZR87_RS02915at 609.263 kb on + strand, within ABZR87_RS02915at 609.264 kb on - strand, within ABZR87_RS02915at 609.316 kb on - strand, within ABZR87_RS02915at 609.316 kb on - strand, within ABZR87_RS02915at 609.321 kb on - strand, within ABZR87_RS02915at 609.395 kb on + strand, within ABZR87_RS02915at 609.395 kb on + strand, within ABZR87_RS02915at 609.395 kb on + strand, within ABZR87_RS02915at 609.396 kb on - strand, within ABZR87_RS02915at 609.435 kb on - strand, within ABZR87_RS02915at 609.435 kb on - strand, within ABZR87_RS02915at 609.435 kb on - strand, within ABZR87_RS02915at 609.548 kb on + strand, within ABZR87_RS02915at 609.548 kb on + strand, within ABZR87_RS02915

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Per-strain Table

Position Strand Gene LocusTag Fraction acetate (C)
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607,129 + ABZR87_RS02905 0.80 +0.4
607,130 - ABZR87_RS02905 0.80 -1.0
607,130 - ABZR87_RS02905 0.80 -0.3
607,130 - ABZR87_RS02905 0.80 -1.6
607,130 - ABZR87_RS02905 0.80 -0.5
607,130 - ABZR87_RS02905 0.80 +1.1
607,203 + ABZR87_RS02905 0.82 -0.8
607,203 + ABZR87_RS02905 0.82 -0.7
607,203 + ABZR87_RS02905 0.82 -0.1
607,204 - ABZR87_RS02905 0.82 -0.2
607,332 - ABZR87_RS02905 0.84 -0.7
607,332 - ABZR87_RS02905 0.84 -0.8
607,369 + ABZR87_RS02905 0.85 +0.3
607,369 + ABZR87_RS02905 0.85 -1.1
607,369 + ABZR87_RS02905 0.85 -2.4
607,369 + ABZR87_RS02905 0.85 -0.7
607,369 + ABZR87_RS02905 0.85 +0.3
607,369 + ABZR87_RS02905 0.85 -1.4
607,370 - ABZR87_RS02905 0.85 -2.7
607,370 - ABZR87_RS02905 0.85 -0.5
607,370 - ABZR87_RS02905 0.85 +0.3
607,370 - ABZR87_RS02905 0.85 +0.7
607,370 - ABZR87_RS02905 0.85 -0.4
607,370 - ABZR87_RS02905 0.85 +0.7
607,370 - ABZR87_RS02905 0.85 +0.5
607,522 + ABZR87_RS02905 0.88 +0.5
607,522 + ABZR87_RS02905 0.88 -2.4
607,523 - ABZR87_RS02905 0.88 -0.2
607,523 - ABZR87_RS02905 0.88 -0.4
607,541 - ABZR87_RS02905 0.89 -0.0
607,541 - ABZR87_RS02905 0.89 -0.6
607,690 + -0.7
607,690 + -1.3
607,690 + -0.5
607,691 - -0.5
607,691 - +0.4
607,723 + -1.0
607,723 + +0.2
607,723 + -0.4
607,723 + -0.1
607,724 - +0.5
607,724 - -0.6
607,724 - +0.8
607,795 + -0.3
607,796 - -1.0
607,840 + +0.4
607,840 + +1.2
607,841 - -0.7
607,841 - +1.6
607,841 - +0.8
607,891 + -1.2
607,891 + +0.4
607,892 - -0.5
607,892 - +0.4
607,954 - +0.7
608,242 - ABZR87_RS02910 0.21 +0.9
608,250 + ABZR87_RS02910 0.22 -0.4
608,250 + ABZR87_RS02910 0.22 +0.7
608,250 + ABZR87_RS02910 0.22 +0.1
608,251 - ABZR87_RS02910 0.22 +1.0
608,251 - ABZR87_RS02910 0.22 -1.1
608,251 - ABZR87_RS02910 0.22 +0.6
608,382 + ABZR87_RS02910 0.41 +0.5
608,382 + ABZR87_RS02910 0.41 -0.4
608,382 + ABZR87_RS02910 0.41 +0.8
608,382 + ABZR87_RS02910 0.41 -0.2
608,382 + ABZR87_RS02910 0.41 -0.4
608,382 + ABZR87_RS02910 0.41 +0.5
608,382 + ABZR87_RS02910 0.41 -0.2
608,383 - ABZR87_RS02910 0.41 +1.1
608,383 - ABZR87_RS02910 0.41 -2.2
608,383 - ABZR87_RS02910 0.41 -0.9
608,662 + ABZR87_RS02910 0.81 -0.2
608,663 - ABZR87_RS02910 0.81 -1.1
608,714 + ABZR87_RS02910 0.88 -0.0
608,714 + ABZR87_RS02910 0.88 -0.6
608,715 - ABZR87_RS02910 0.88 +0.3
608,715 - ABZR87_RS02910 0.88 -0.8
608,715 - ABZR87_RS02910 0.88 -0.2
608,715 - ABZR87_RS02910 0.88 -0.1
608,715 - ABZR87_RS02910 0.88 +0.3
608,971 + -0.7
609,150 + ABZR87_RS02915 0.19 -0.2
609,263 + ABZR87_RS02915 0.26 -0.3
609,264 - ABZR87_RS02915 0.26 -0.1
609,316 - ABZR87_RS02915 0.29 +0.3
609,316 - ABZR87_RS02915 0.29 -0.3
609,321 - ABZR87_RS02915 0.29 +0.2
609,395 + ABZR87_RS02915 0.33 +0.4
609,395 + ABZR87_RS02915 0.33 -0.2
609,395 + ABZR87_RS02915 0.33 -0.1
609,396 - ABZR87_RS02915 0.33 +0.0
609,435 - ABZR87_RS02915 0.35 -0.4
609,435 - ABZR87_RS02915 0.35 -0.8
609,435 - ABZR87_RS02915 0.35 +0.2
609,548 + ABZR87_RS02915 0.41 -1.3
609,548 + ABZR87_RS02915 0.41 -2.3

Or see this region's nucleotide sequence