Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006574

Experiment: Motility_chemotaxis, R2A; outer cut

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE53_006573 and ABIE53_006574 are separated by 72 nucleotidesABIE53_006574 and ABIE53_006575 are separated by 53 nucleotidesABIE53_006575 and ABIE53_006576 are separated by 353 nucleotides ABIE53_006573: ABIE53_006573 - 16S ribosomal RNA, at 1,188,741 to 1,190,273 _006573 ABIE53_006574: ABIE53_006574 - tRNA-Ile, at 1,190,346 to 1,190,422 _006574 ABIE53_006575: ABIE53_006575 - tRNA-Ala, at 1,190,476 to 1,190,551 _006575 ABIE53_006576: ABIE53_006576 - 23S ribosomal RNA, at 1,190,905 to 1,193,787 _006576 Position (kb) 1190 1191Strain fitness (log2 ratio) -1 0 1 2 3at 1190.469 kb on + strandat 1190.469 kb on + strandat 1190.469 kb on + strandat 1190.469 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility_chemotaxis, R2A; outer cut
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1,190,469 + +0.8
1,190,469 + +3.6
1,190,469 + -1.7
1,190,469 + -0.4

Or see this region's nucleotide sequence