Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS08780 and ABZR87_RS08785 are separated by 156 nucleotides ABZR87_RS08785 and ABZR87_RS08790 are separated by 6 nucleotides ABZR87_RS08790 and ABZR87_RS08795 are separated by 52 nucleotides
ABZR87_RS08780: ABZR87_RS08780 - TetR/AcrR family transcriptional regulator, at 1,866,309 to 1,867,076
_RS08780
ABZR87_RS08785: ABZR87_RS08785 - YkgJ family cysteine cluster protein, at 1,867,233 to 1,867,490
_RS08785
ABZR87_RS08790: ABZR87_RS08790 - DUF1439 domain-containing protein, at 1,867,497 to 1,868,090
_RS08790
ABZR87_RS08795: ABZR87_RS08795 - undecaprenyl-diphosphate phosphatase, at 1,868,143 to 1,869,024
_RS08795
Position (kb)
1867
1868 Strain fitness (log2 ratio)
-2
-1
0
1 at 1866.276 kb on + strand at 1866.276 kb on + strand at 1866.277 kb on - strand at 1866.277 kb on - strand at 1866.277 kb on - strand at 1866.277 kb on - strand at 1866.444 kb on + strand, within ABZR87_RS08780 at 1866.444 kb on + strand, within ABZR87_RS08780 at 1866.652 kb on + strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.653 kb on - strand, within ABZR87_RS08780 at 1866.655 kb on + strand, within ABZR87_RS08780 at 1866.656 kb on - strand, within ABZR87_RS08780 at 1866.656 kb on - strand, within ABZR87_RS08780 at 1866.656 kb on - strand, within ABZR87_RS08780 at 1866.656 kb on - strand, within ABZR87_RS08780 at 1866.656 kb on - strand, within ABZR87_RS08780 at 1866.656 kb on - strand, within ABZR87_RS08780 at 1866.877 kb on + strand, within ABZR87_RS08780 at 1866.877 kb on + strand, within ABZR87_RS08780 at 1866.878 kb on - strand, within ABZR87_RS08780 at 1866.878 kb on - strand, within ABZR87_RS08780 at 1866.878 kb on - strand, within ABZR87_RS08780 at 1866.878 kb on - strand, within ABZR87_RS08780 at 1866.878 kb on - strand, within ABZR87_RS08780 at 1866.883 kb on + strand, within ABZR87_RS08780 at 1866.884 kb on - strand, within ABZR87_RS08780 at 1866.884 kb on - strand, within ABZR87_RS08780 at 1866.943 kb on + strand, within ABZR87_RS08780 at 1867.058 kb on + strand at 1867.097 kb on - strand at 1867.097 kb on - strand at 1867.115 kb on + strand at 1867.116 kb on - strand at 1867.121 kb on - strand at 1867.361 kb on + strand, within ABZR87_RS08785 at 1867.361 kb on + strand, within ABZR87_RS08785 at 1867.362 kb on - strand, within ABZR87_RS08785 at 1867.626 kb on + strand, within ABZR87_RS08790 at 1867.626 kb on + strand, within ABZR87_RS08790 at 1867.626 kb on + strand, within ABZR87_RS08790 at 1867.627 kb on - strand, within ABZR87_RS08790 at 1867.842 kb on + strand, within ABZR87_RS08790 at 1867.842 kb on + strand, within ABZR87_RS08790 at 1867.842 kb on + strand, within ABZR87_RS08790 at 1867.842 kb on + strand, within ABZR87_RS08790 at 1867.843 kb on - strand, within ABZR87_RS08790 at 1867.843 kb on - strand, within ABZR87_RS08790 at 1867.843 kb on - strand, within ABZR87_RS08790 at 1867.843 kb on - strand, within ABZR87_RS08790 at 1867.843 kb on - strand, within ABZR87_RS08790 at 1867.977 kb on + strand, within ABZR87_RS08790 at 1867.978 kb on - strand, within ABZR87_RS08790 at 1867.986 kb on + strand, within ABZR87_RS08790 at 1867.986 kb on + strand, within ABZR87_RS08790 at 1867.986 kb on + strand, within ABZR87_RS08790 at 1867.986 kb on + strand, within ABZR87_RS08790 at 1867.986 kb on + strand, within ABZR87_RS08790 at 1867.986 kb on + strand, within ABZR87_RS08790 at 1867.987 kb on - strand, within ABZR87_RS08790 at 1867.987 kb on - strand, within ABZR87_RS08790 at 1867.987 kb on - strand, within ABZR87_RS08790 at 1867.987 kb on - strand, within ABZR87_RS08790 at 1868.030 kb on - strand, within ABZR87_RS08790 at 1868.030 kb on - strand, within ABZR87_RS08790 at 1868.030 kb on - strand, within ABZR87_RS08790 at 1868.039 kb on + strand at 1868.137 kb on + strand at 1868.137 kb on + strand at 1868.137 kb on + strand at 1868.138 kb on - strand at 1868.138 kb on - strand at 1868.138 kb on - strand at 1868.220 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,866,276 + +0.0 1,866,276 + +0.9 1,866,277 - -2.4 1,866,277 - -0.1 1,866,277 - +1.4 1,866,277 - +0.1 1,866,444 + ABZR87_RS08780 0.18 +0.5 1,866,444 + ABZR87_RS08780 0.18 -0.5 1,866,652 + ABZR87_RS08780 0.45 +0.3 1,866,653 - ABZR87_RS08780 0.45 +0.3 1,866,653 - ABZR87_RS08780 0.45 +0.2 1,866,653 - ABZR87_RS08780 0.45 +0.2 1,866,653 - ABZR87_RS08780 0.45 -0.3 1,866,653 - ABZR87_RS08780 0.45 +0.1 1,866,653 - ABZR87_RS08780 0.45 +0.4 1,866,653 - ABZR87_RS08780 0.45 -0.4 1,866,653 - ABZR87_RS08780 0.45 +0.2 1,866,653 - ABZR87_RS08780 0.45 -0.4 1,866,655 + ABZR87_RS08780 0.45 -2.2 1,866,656 - ABZR87_RS08780 0.45 -0.6 1,866,656 - ABZR87_RS08780 0.45 -0.2 1,866,656 - ABZR87_RS08780 0.45 +0.7 1,866,656 - ABZR87_RS08780 0.45 -0.1 1,866,656 - ABZR87_RS08780 0.45 -0.4 1,866,656 - ABZR87_RS08780 0.45 -0.8 1,866,877 + ABZR87_RS08780 0.74 -1.2 1,866,877 + ABZR87_RS08780 0.74 -1.1 1,866,878 - ABZR87_RS08780 0.74 -0.9 1,866,878 - ABZR87_RS08780 0.74 -1.1 1,866,878 - ABZR87_RS08780 0.74 -0.0 1,866,878 - ABZR87_RS08780 0.74 -0.9 1,866,878 - ABZR87_RS08780 0.74 +0.6 1,866,883 + ABZR87_RS08780 0.75 +0.1 1,866,884 - ABZR87_RS08780 0.75 -0.2 1,866,884 - ABZR87_RS08780 0.75 -0.1 1,866,943 + ABZR87_RS08780 0.83 -0.6 1,867,058 + -0.3 1,867,097 - -0.5 1,867,097 - -0.0 1,867,115 + +0.4 1,867,116 - +0.3 1,867,121 - +0.7 1,867,361 + ABZR87_RS08785 0.50 +1.0 1,867,361 + ABZR87_RS08785 0.50 +0.1 1,867,362 - ABZR87_RS08785 0.50 -0.3 1,867,626 + ABZR87_RS08790 0.22 -1.9 1,867,626 + ABZR87_RS08790 0.22 -0.0 1,867,626 + ABZR87_RS08790 0.22 -0.0 1,867,627 - ABZR87_RS08790 0.22 -1.8 1,867,842 + ABZR87_RS08790 0.58 -0.0 1,867,842 + ABZR87_RS08790 0.58 -0.4 1,867,842 + ABZR87_RS08790 0.58 +1.6 1,867,842 + ABZR87_RS08790 0.58 +1.2 1,867,843 - ABZR87_RS08790 0.58 +0.3 1,867,843 - ABZR87_RS08790 0.58 -0.7 1,867,843 - ABZR87_RS08790 0.58 -1.9 1,867,843 - ABZR87_RS08790 0.58 +0.2 1,867,843 - ABZR87_RS08790 0.58 -0.1 1,867,977 + ABZR87_RS08790 0.81 +0.6 1,867,978 - ABZR87_RS08790 0.81 -0.1 1,867,986 + ABZR87_RS08790 0.82 +0.1 1,867,986 + ABZR87_RS08790 0.82 +0.0 1,867,986 + ABZR87_RS08790 0.82 -0.4 1,867,986 + ABZR87_RS08790 0.82 -2.6 1,867,986 + ABZR87_RS08790 0.82 -0.3 1,867,986 + ABZR87_RS08790 0.82 -0.2 1,867,987 - ABZR87_RS08790 0.82 -0.2 1,867,987 - ABZR87_RS08790 0.82 +0.4 1,867,987 - ABZR87_RS08790 0.82 +0.1 1,867,987 - ABZR87_RS08790 0.82 -1.3 1,868,030 - ABZR87_RS08790 0.90 -0.1 1,868,030 - ABZR87_RS08790 0.90 -0.4 1,868,030 - ABZR87_RS08790 0.90 -0.2 1,868,039 + +0.0 1,868,137 + +0.4 1,868,137 + +0.4 1,868,137 + +0.3 1,868,138 - +1.2 1,868,138 - +0.5 1,868,138 - +1.6 1,868,220 + +1.0
Or see this region's nucleotide sequence