Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06625

Experiment: Protocatechuic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Protocatechuic Acid (C)
1,408,336	-				-1.2
1,408,336	-				-1.0
1,408,371	+				+1.9
1,408,372	-				-0.8
1,408,486	+		ABZR87_RS06620	0.31	+0.7
1,408,486	+		ABZR87_RS06620	0.31	-0.8
1,408,486	+		ABZR87_RS06620	0.31	+0.2
1,408,487	-		ABZR87_RS06620	0.32	-1.8
1,408,487	-		ABZR87_RS06620	0.32	-0.6
1,408,487	-		ABZR87_RS06620	0.32	-0.9
1,408,487	-		ABZR87_RS06620	0.32	+0.3
1,408,487	-		ABZR87_RS06620	0.32	+0.8
1,408,505	-		ABZR87_RS06620	0.37	+0.4
1,408,612	+		ABZR87_RS06620	0.69	-0.7
1,408,612	+		ABZR87_RS06620	0.69	-0.5
1,408,612	+		ABZR87_RS06620	0.69	-0.5
1,408,612	+		ABZR87_RS06620	0.69	+0.3
1,408,612	+		ABZR87_RS06620	0.69	-0.7
1,408,613	-		ABZR87_RS06620	0.70	-0.5
1,408,613	-		ABZR87_RS06620	0.70	-0.1
1,408,699	+				+0.9
1,408,699	+				+0.4
1,408,699	+				-0.7
1,408,700	-				+1.6
1,408,750	-				+2.6
1,408,792	+				+0.5
1,408,792	+				+0.4
1,408,792	+				+3.3
1,408,792	+				+0.3
1,408,792	+				-0.1
1,408,792	+				-2.2
1,408,792	+				+0.8
1,408,792	+				-0.6
1,408,792	+				+0.1
1,408,792	+				+2.1
1,408,792	+				+0.1
1,408,792	+				+0.7
1,408,792	+				-0.5
1,408,792	+				+1.7
1,408,792	+				+1.1
1,408,792	+				-0.3
1,408,792	+				+1.6
1,408,792	+				-0.4
1,408,792	+				-1.4
1,408,792	+				-0.1
1,408,793	-				+1.8
1,408,793	-				+0.2
1,408,793	-				+1.4
1,408,793	-				-1.6
1,408,793	-				+0.9
1,408,793	-				+0.5
1,408,793	-				-0.6
1,408,793	-				-1.0
1,408,793	-				-1.8
1,408,793	-				+0.0
1,408,793	-				-0.8
1,408,793	-				+0.1
1,408,793	-				+0.4
1,408,793	-				-2.1
1,408,820	+				+1.2
1,408,820	+				+0.4
1,408,820	+				+0.4
1,408,821	-				+0.5
1,408,822	+				-0.3
1,408,822	+				+0.2
1,408,822	+				+1.0
1,408,822	+				+0.9
1,408,822	+				+0.3
1,408,822	+				+0.7
1,408,822	+				-0.7
1,408,822	+				-0.5
1,408,822	+				+0.9
1,408,822	+				+0.4
1,408,822	+				+0.5
1,408,822	+				+0.3
1,408,823	-				-0.4
1,408,823	-				+0.0
1,408,823	-				+0.6
1,408,823	-				+2.0
1,408,823	-				-1.2
1,408,823	-				-1.6
1,408,823	-				-1.9
1,408,962	+				-1.4
1,408,963	-				+0.2
1,408,963	-				+0.3
1,408,979	+				-1.0
1,408,979	+				+0.8
1,408,979	+				-0.0
1,408,979	+				-1.8
1,408,979	+				-0.3
1,408,980	-				-0.5
1,408,980	-				+0.4
1,408,980	-				+0.0
1,409,011	+				+1.3
1,409,011	+				-0.2
1,409,011	+				-0.4
1,409,011	+				-0.6
1,409,011	+				-0.8
1,409,012	-				+0.6
1,409,023	+				-0.6
1,409,023	+				-0.4
1,409,024	-				+1.7
1,409,024	-				+0.2
1,409,076	+				-0.1
1,409,179	+				-0.2
1,409,180	-				-1.7
1,409,191	+				-0.4
1,409,191	+				-0.4
1,409,191	+				+0.5
1,409,191	+				-2.9
1,409,191	+				-2.0
1,409,191	+				+1.0
1,409,192	-				+0.0
1,409,192	-				+0.4
1,409,195	+				+0.1
1,409,195	+				-0.4
1,409,195	+				-0.1
1,409,195	+				+0.2
1,409,195	+				-1.1
1,409,195	+				-0.9
1,409,196	-				+0.1
1,409,196	-				+0.9
1,409,196	-				+0.2
1,409,196	-				-2.1
1,409,196	-				-2.2
1,409,196	-				+0.4
1,409,196	-				-0.7
1,409,239	+				-1.6
1,409,239	+				+0.0
1,409,240	-				+0.6
1,409,328	+		ABZR87_RS06625	0.13	+1.9
1,409,329	-		ABZR87_RS06625	0.13	-1.4
1,409,329	-		ABZR87_RS06625	0.13	-0.2
1,409,401	+		ABZR87_RS06625	0.18	+0.3
1,409,401	+		ABZR87_RS06625	0.18	-1.4
1,409,401	+		ABZR87_RS06625	0.18	+0.1
1,409,402	-		ABZR87_RS06625	0.18	-1.4
1,409,402	-		ABZR87_RS06625	0.18	+0.3
1,409,402	-		ABZR87_RS06625	0.18	-2.7
1,409,402	-		ABZR87_RS06625	0.18	-0.2
1,409,402	-		ABZR87_RS06625	0.18	-0.7
1,409,402	-		ABZR87_RS06625	0.18	-0.6
1,409,402	-		ABZR87_RS06625	0.18	+0.5
1,409,496	+		ABZR87_RS06625	0.26	-0.2
1,409,496	+		ABZR87_RS06625	0.26	-1.2
1,409,496	+		ABZR87_RS06625	0.26	-0.7
1,409,496	+		ABZR87_RS06625	0.26	-0.3
1,409,497	-		ABZR87_RS06625	0.26	+1.0
1,409,497	-		ABZR87_RS06625	0.26	+0.9
1,409,522	-		ABZR87_RS06625	0.28	+1.7
1,409,522	-		ABZR87_RS06625	0.28	-0.1
1,409,794	+		ABZR87_RS06625	0.49	-0.7
1,409,794	+		ABZR87_RS06625	0.49	+0.7
1,409,794	+		ABZR87_RS06625	0.49	+1.6
1,409,795	-		ABZR87_RS06625	0.49	-0.6
1,409,795	-		ABZR87_RS06625	0.49	-0.5
1,409,795	-		ABZR87_RS06625	0.49	-1.6
1,409,842	+		ABZR87_RS06625	0.53	-1.4
1,409,842	+		ABZR87_RS06625	0.53	-1.9
1,409,843	-		ABZR87_RS06625	0.53	-0.7
1,409,926	+		ABZR87_RS06625	0.59	-0.2
1,409,926	+		ABZR87_RS06625	0.59	-0.3
1,409,927	-		ABZR87_RS06625	0.59	-2.3
1,409,927	-		ABZR87_RS06625	0.59	+0.5
1,410,056	-		ABZR87_RS06625	0.69	-0.3
1,410,085	+		ABZR87_RS06625	0.71	-1.1
1,410,085	+		ABZR87_RS06625	0.71	-0.4
1,410,085	+		ABZR87_RS06625	0.71	-0.4
1,410,085	+		ABZR87_RS06625	0.71	-0.1
1,410,085	+		ABZR87_RS06625	0.71	-2.1
1,410,085	+		ABZR87_RS06625	0.71	-0.2
1,410,085	+		ABZR87_RS06625	0.71	-0.3
1,410,085	+		ABZR87_RS06625	0.71	+0.4
1,410,085	+		ABZR87_RS06625	0.71	+0.5
1,410,085	+		ABZR87_RS06625	0.71	+0.6
1,410,085	+		ABZR87_RS06625	0.71	-0.2
1,410,086	-		ABZR87_RS06625	0.71	+0.6
1,410,086	-		ABZR87_RS06625	0.71	-0.6
1,410,086	-		ABZR87_RS06625	0.71	-0.2
1,410,086	-		ABZR87_RS06625	0.71	+0.5
1,410,086	-		ABZR87_RS06625	0.71	+1.2
1,410,086	-		ABZR87_RS06625	0.71	-0.8
1,410,086	-		ABZR87_RS06625	0.71	+0.1
1,410,086	-		ABZR87_RS06625	0.71	-0.8
1,410,086	-		ABZR87_RS06625	0.71	-0.8
1,410,086	-		ABZR87_RS06625	0.71	-0.6
1,410,086	-		ABZR87_RS06625	0.71	-0.3
1,410,507	+				+0.7
1,410,507	+				-0.1
1,410,508	-				-0.7
1,410,508	-				+0.1
1,410,508	-				+0.8
1,410,730	+				+0.5
1,410,730	+				-0.1
1,410,731	-				+0.5
1,410,823	-		ABZR87_RS06630	0.13	-0.4
1,410,823	-		ABZR87_RS06630	0.13	+0.8
1,410,823	-		ABZR87_RS06630	0.13	-1.3
1,410,856	-		ABZR87_RS06630	0.15	-1.7
1,410,861	+		ABZR87_RS06630	0.15	-2.1
1,410,861	+		ABZR87_RS06630	0.15	-0.1
1,410,861	+		ABZR87_RS06630	0.15	+0.6
1,410,861	+		ABZR87_RS06630	0.15	+0.0
1,410,861	+		ABZR87_RS06630	0.15	+1.5
1,410,862	-		ABZR87_RS06630	0.15	+0.6
1,410,862	-		ABZR87_RS06630	0.15	-0.4
1,410,862	-		ABZR87_RS06630	0.15	+0.9
1,410,949	-		ABZR87_RS06630	0.20	-1.3
1,410,990	+		ABZR87_RS06630	0.22	-1.3
1,410,990	+		ABZR87_RS06630	0.22	+1.2
1,410,990	+		ABZR87_RS06630	0.22	+0.3
1,410,990	+		ABZR87_RS06630	0.22	-0.4
1,410,990	+		ABZR87_RS06630	0.22	+0.2
1,410,990	+		ABZR87_RS06630	0.22	+2.2
1,410,990	+		ABZR87_RS06630	0.22	-0.8
1,410,990	+		ABZR87_RS06630	0.22	-0.0
1,410,990	+		ABZR87_RS06630	0.22	-1.2
1,410,990	+		ABZR87_RS06630	0.22	+2.1
1,410,990	+		ABZR87_RS06630	0.22	+0.1
1,410,990	+		ABZR87_RS06630	0.22	+0.7
1,410,991	-		ABZR87_RS06630	0.22	-0.3
1,410,991	-		ABZR87_RS06630	0.22	+0.3
1,410,991	-		ABZR87_RS06630	0.22	+0.2
1,410,991	-		ABZR87_RS06630	0.22	-1.1
1,410,991	-		ABZR87_RS06630	0.22	+0.4
1,410,991	-		ABZR87_RS06630	0.22	+2.2
1,410,991	-		ABZR87_RS06630	0.22	-1.1
1,411,032	+		ABZR87_RS06630	0.24	-2.7
1,411,032	+		ABZR87_RS06630	0.24	+1.2
1,411,032	+		ABZR87_RS06630	0.24	-0.5
1,411,032	+		ABZR87_RS06630	0.24	+0.3
1,411,032	+		ABZR87_RS06630	0.24	-1.0
1,411,033	-		ABZR87_RS06630	0.24	-2.6
1,411,033	-		ABZR87_RS06630	0.24	+0.1
1,411,033	-		ABZR87_RS06630	0.24	+0.8
1,411,033	-		ABZR87_RS06630	0.24	+0.0
1,411,033	-		ABZR87_RS06630	0.24	+1.3
1,411,065	+		ABZR87_RS06630	0.25	-0.4
1,411,065	+		ABZR87_RS06630	0.25	-0.9
1,411,065	+		ABZR87_RS06630	0.25	+1.0
1,411,065	+		ABZR87_RS06630	0.25	-1.2
1,411,066	-		ABZR87_RS06630	0.25	+0.1
1,411,066	-		ABZR87_RS06630	0.25	-1.8
1,411,066	-		ABZR87_RS06630	0.25	-0.8
1,411,066	-		ABZR87_RS06630	0.25	-0.1
1,411,080	+		ABZR87_RS06630	0.26	-0.8
1,411,080	+		ABZR87_RS06630	0.26	+0.5
1,411,152	+		ABZR87_RS06630	0.30	-0.5
1,411,152	+		ABZR87_RS06630	0.30	+0.4
1,411,153	-		ABZR87_RS06630	0.30	-0.1
1,411,153	-		ABZR87_RS06630	0.30	+0.3
1,411,153	-		ABZR87_RS06630	0.30	-0.1
1,411,153	-		ABZR87_RS06630	0.30	-2.3
1,411,155	+		ABZR87_RS06630	0.30	+0.1
1,411,155	+		ABZR87_RS06630	0.30	+3.2
1,411,155	+		ABZR87_RS06630	0.30	+0.6
1,411,155	+		ABZR87_RS06630	0.30	+0.2
1,411,155	+		ABZR87_RS06630	0.30	+2.0
1,411,156	-		ABZR87_RS06630	0.30	-0.4
1,411,156	-		ABZR87_RS06630	0.30	+0.3
1,411,156	-		ABZR87_RS06630	0.30	+0.9
1,411,156	-		ABZR87_RS06630	0.30	+0.4
1,411,156	-		ABZR87_RS06630	0.30	-0.6
1,411,156	-		ABZR87_RS06630	0.30	+0.5
1,411,156	-		ABZR87_RS06630	0.30	+1.9
1,411,156	-		ABZR87_RS06630	0.30	+1.0
1,411,156	-		ABZR87_RS06630	0.30	-0.8
1,411,156	-		ABZR87_RS06630	0.30	+0.5
1,411,377	+		ABZR87_RS06630	0.41	+0.1
1,411,377	+		ABZR87_RS06630	0.41	-0.5
1,411,377	+		ABZR87_RS06630	0.41	+2.2
1,411,378	-		ABZR87_RS06630	0.41	-1.1
1,411,378	-		ABZR87_RS06630	0.41	-0.2
1,411,378	-		ABZR87_RS06630	0.41	+0.5
1,411,378	-		ABZR87_RS06630	0.41	-0.1
1,411,381	-		ABZR87_RS06630	0.41	-1.4
1,411,381	-		ABZR87_RS06630	0.41	-0.1
1,411,381	-		ABZR87_RS06630	0.41	+0.7
1,411,381	-		ABZR87_RS06630	0.41	+0.1