Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05740

Experiment: Protocatechuic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Protocatechuic Acid (C)
1,223,575	+		ABZR87_RS05735	0.61	+0.4
1,223,582	+		ABZR87_RS05735	0.62	-0.6
1,223,602	-		ABZR87_RS05735	0.64	-2.1
1,223,602	-		ABZR87_RS05735	0.64	-0.5
1,223,615	+		ABZR87_RS05735	0.65	+1.1
1,223,615	+		ABZR87_RS05735	0.65	-0.1
1,223,615	+		ABZR87_RS05735	0.65	-1.9
1,223,615	+		ABZR87_RS05735	0.65	-0.6
1,223,615	+		ABZR87_RS05735	0.65	+0.1
1,223,615	+		ABZR87_RS05735	0.65	+0.4
1,223,616	-		ABZR87_RS05735	0.66	+1.2
1,223,616	-		ABZR87_RS05735	0.66	-0.1
1,223,616	-		ABZR87_RS05735	0.66	+1.1
1,223,616	-		ABZR87_RS05735	0.66	+0.2
1,223,616	-		ABZR87_RS05735	0.66	-0.3
1,223,616	-		ABZR87_RS05735	0.66	+0.4
1,223,678	+		ABZR87_RS05735	0.73	+0.7
1,223,678	+		ABZR87_RS05735	0.73	-0.0
1,223,678	+		ABZR87_RS05735	0.73	-0.1
1,223,678	+		ABZR87_RS05735	0.73	-0.7
1,223,678	+		ABZR87_RS05735	0.73	-0.8
1,223,678	+		ABZR87_RS05735	0.73	+0.5
1,223,678	+		ABZR87_RS05735	0.73	+2.4
1,223,678	+		ABZR87_RS05735	0.73	+0.4
1,223,679	-		ABZR87_RS05735	0.73	+0.4
1,223,679	-		ABZR87_RS05735	0.73	-0.6
1,223,679	-		ABZR87_RS05735	0.73	-0.3
1,223,679	-		ABZR87_RS05735	0.73	-0.1
1,223,679	-		ABZR87_RS05735	0.73	+0.7
1,223,679	-		ABZR87_RS05735	0.73	+0.5
1,223,679	-		ABZR87_RS05735	0.73	-0.8
1,223,679	-		ABZR87_RS05735	0.73	+0.6
1,223,709	+		ABZR87_RS05735	0.76	+0.5
1,223,710	-		ABZR87_RS05735	0.76	-0.6
1,223,710	-		ABZR87_RS05735	0.76	-0.9
1,223,741	+		ABZR87_RS05735	0.80	+0.3
1,223,741	+		ABZR87_RS05735	0.80	+0.5
1,223,741	+		ABZR87_RS05735	0.80	+0.0
1,223,741	+		ABZR87_RS05735	0.80	+0.3
1,223,741	+		ABZR87_RS05735	0.80	+0.6
1,223,741	+		ABZR87_RS05735	0.80	+0.1
1,223,741	+		ABZR87_RS05735	0.80	+0.8
1,223,741	+		ABZR87_RS05735	0.80	+0.1
1,223,741	+		ABZR87_RS05735	0.80	+2.7
1,223,742	-		ABZR87_RS05735	0.80	-0.3
1,223,742	-		ABZR87_RS05735	0.80	+0.4
1,223,742	-		ABZR87_RS05735	0.80	-1.9
1,223,742	-		ABZR87_RS05735	0.80	+0.4
1,223,742	-		ABZR87_RS05735	0.80	+0.4
1,223,742	-		ABZR87_RS05735	0.80	+1.2
1,223,876	+				+0.2
1,223,876	+				-0.6
1,223,876	+				+1.7
1,223,876	+				-0.5
1,223,876	+				+1.7
1,223,876	+				+1.6
1,223,877	-				+0.3
1,223,877	-				-2.4
1,223,877	-				+0.2
1,223,877	-				+1.0
1,223,877	-				-1.2
1,223,877	-				+0.4
1,223,877	-				-0.3
1,223,878	+				+1.3
1,223,878	+				+0.2
1,223,879	-				-0.5
1,223,884	+				-0.0
1,223,884	+				+0.9
1,223,884	+				+0.3
1,223,885	-				+1.1
1,223,888	+				+0.1
1,223,925	+				+0.7
1,223,925	+				-0.6
1,223,925	+				-0.4
1,223,925	+				+0.2
1,223,925	+				+0.2
1,223,925	+				-0.1
1,223,926	-				+0.1
1,223,926	-				+1.3
1,223,926	-				+3.1
1,223,926	-				-0.5
1,223,926	-				+0.9
1,223,926	-				-1.8
1,223,931	+				-0.4
1,223,931	+				+0.1
1,223,931	+				+0.6
1,223,932	-				-0.6
1,223,932	-				+0.4
1,223,939	+				-0.0
1,223,953	+				+0.2
1,223,954	-				-0.3
1,223,954	-				-0.1
1,223,954	-				-1.5
1,223,954	-				+1.1
1,223,961	+				+2.4
1,223,961	+				-0.0
1,223,961	+				-0.9
1,223,961	+				-1.3
1,223,961	+				-1.5
1,223,962	-				-0.0
1,223,967	+				+0.9
1,223,967	+				-1.6
1,223,968	-				+0.2
1,223,968	-				+0.3
1,224,008	+				+0.6
1,224,008	+				+0.4
1,224,009	-				-2.1
1,224,009	-				+1.3
1,224,009	-				-0.6
1,224,056	-				-0.5
1,224,056	-				+0.4
1,224,056	-				+0.6
1,224,056	-				-1.5
1,224,056	-				+0.4
1,224,102	-				-0.1
1,224,102	-				+1.0
1,224,109	+				-1.4
1,224,123	+				-1.0
1,224,123	+				-0.2
1,224,127	+				+1.0
1,224,127	+				+0.4
1,224,174	+				-0.2
1,224,174	+				-1.0
1,224,174	+				-1.5
1,224,236	+				+0.6
1,224,237	-				+0.4
1,224,260	+				+0.6
1,224,283	+				-1.1
1,224,283	+				+1.6
1,224,283	+				+0.4
1,224,284	-				+0.0
1,224,284	-				-0.2
1,224,284	-				-0.3
1,224,284	-				+0.1
1,224,284	-				-0.0
1,224,298	+				-1.9
1,224,298	+				-2.2
1,224,298	+				-0.3
1,224,298	+				-0.5
1,224,298	+				+0.2
1,224,298	+				-0.3
1,224,298	+				-1.1
1,224,299	-				-1.5
1,224,299	-				+0.2
1,224,299	-				-0.7
1,224,299	-				+0.2
1,224,299	-				-0.3
1,224,299	-				-1.2
1,224,347	+				-0.1
1,224,347	+				+0.2
1,224,348	-				-0.3
1,224,348	-				+0.3
1,224,348	-				-0.5
1,224,370	+				-0.4
1,224,427	+				-0.4
1,224,427	+				+0.0
1,224,427	+				-0.2
1,224,427	+				+0.4
1,224,427	+				+1.7
1,224,427	+				+0.2
1,224,428	-				-1.4
1,224,428	-				-2.0
1,224,428	-				-0.9
1,224,449	+				-0.3
1,224,449	+				+0.7
1,224,449	+				+1.2
1,224,450	-				+0.7
1,224,450	-				+2.0
1,224,450	-				+1.1
1,224,463	+				-1.3
1,224,464	-				-0.5
1,224,464	-				-0.4
1,224,473	+				-0.8
1,224,506	+				+0.2
1,224,548	-				+1.2
1,224,548	-				-0.6
1,224,548	-				-0.3
1,224,548	-				-0.4
1,224,584	+				-0.7
1,224,612	-				-0.7
1,224,612	-				+0.6
1,224,631	+				-0.8
1,224,631	+				+0.1
1,224,631	+				-0.4
1,224,631	+				+0.8
1,224,631	+				-0.9
1,224,631	+				-0.3
1,224,631	+				-0.3
1,224,631	+				-0.8
1,224,631	+				+0.2
1,224,631	+				-0.4
1,224,631	+				-0.8
1,224,631	+				-1.1
1,224,631	+				-0.0
1,224,632	-				+0.6
1,224,632	-				-0.7
1,224,632	-				+1.5
1,224,632	-				+3.0
1,224,632	-				+0.4
1,224,632	-				-0.7
1,224,632	-				+0.9
1,224,632	-				+0.1
1,224,632	-				+0.6
1,224,632	-				-0.2
1,224,632	-				-0.9
1,224,632	-				-0.6
1,224,632	-				-0.2
1,224,632	-				-0.9
1,224,720	+		ABZR87_RS05740	0.16	+1.1
1,224,720	+		ABZR87_RS05740	0.16	+0.0
1,224,720	+		ABZR87_RS05740	0.16	+1.0
1,224,720	+		ABZR87_RS05740	0.16	+0.7
1,224,720	+		ABZR87_RS05740	0.16	+0.0
1,224,720	+		ABZR87_RS05740	0.16	-2.0
1,224,720	+		ABZR87_RS05740	0.16	+0.1
1,224,721	-		ABZR87_RS05740	0.16	+2.7
1,224,721	-		ABZR87_RS05740	0.16	+2.0
1,224,721	-		ABZR87_RS05740	0.16	-0.6
1,224,721	-		ABZR87_RS05740	0.16	+0.3
1,224,721	-		ABZR87_RS05740	0.16	+1.1
1,224,721	-		ABZR87_RS05740	0.16	+0.4
1,224,740	+		ABZR87_RS05740	0.18	+0.6
1,224,740	+		ABZR87_RS05740	0.18	-0.8
1,224,741	-		ABZR87_RS05740	0.18	+0.4
1,224,741	-		ABZR87_RS05740	0.18	-1.1
1,224,741	-		ABZR87_RS05740	0.18	-2.7
1,224,741	-		ABZR87_RS05740	0.18	+0.4
1,224,741	-		ABZR87_RS05740	0.18	+0.2
1,224,774	+		ABZR87_RS05740	0.21	+0.9
1,224,774	+		ABZR87_RS05740	0.21	+0.1
1,224,774	+		ABZR87_RS05740	0.21	+1.4
1,224,774	+		ABZR87_RS05740	0.21	+2.1
1,224,775	-		ABZR87_RS05740	0.21	-0.9
1,224,775	-		ABZR87_RS05740	0.21	-1.3
1,224,775	-		ABZR87_RS05740	0.21	-1.8
1,224,775	-		ABZR87_RS05740	0.21	-0.2
1,224,775	-		ABZR87_RS05740	0.21	+1.1
1,224,839	-		ABZR87_RS05740	0.26	+1.1
1,224,879	+		ABZR87_RS05740	0.29	+0.7
1,224,879	+		ABZR87_RS05740	0.29	-1.2
1,224,879	+		ABZR87_RS05740	0.29	+1.2
1,224,879	+		ABZR87_RS05740	0.29	-0.3
1,224,880	-		ABZR87_RS05740	0.29	+0.9
1,224,892	+		ABZR87_RS05740	0.30	+1.4
1,225,307	+		ABZR87_RS05740	0.64	+0.5
1,225,308	-		ABZR87_RS05740	0.65	-0.4
1,225,308	-		ABZR87_RS05740	0.65	-0.3
1,225,358	+		ABZR87_RS05740	0.69	+0.8
1,225,358	+		ABZR87_RS05740	0.69	-0.9
1,225,358	+		ABZR87_RS05740	0.69	+0.4
1,225,358	+		ABZR87_RS05740	0.69	+0.1
1,225,359	-		ABZR87_RS05740	0.69	+0.1
1,225,359	-		ABZR87_RS05740	0.69	+0.7
1,225,359	-		ABZR87_RS05740	0.69	-0.5
1,225,359	-		ABZR87_RS05740	0.69	+1.3
1,225,398	-		ABZR87_RS05740	0.72	+0.5
1,225,436	+		ABZR87_RS05740	0.75	-1.1
1,225,436	+		ABZR87_RS05740	0.75	+0.1
1,225,436	+		ABZR87_RS05740	0.75	-2.1
1,225,436	+		ABZR87_RS05740	0.75	-0.9
1,225,436	+		ABZR87_RS05740	0.75	-1.6
1,225,436	+		ABZR87_RS05740	0.75	+1.4
1,225,437	-		ABZR87_RS05740	0.75	-1.7
1,225,437	-		ABZR87_RS05740	0.75	+0.4
1,225,437	-		ABZR87_RS05740	0.75	+0.4
1,225,437	-		ABZR87_RS05740	0.75	+0.6
1,225,616	+		ABZR87_RS05740	0.90	-1.3
1,225,617	-		ABZR87_RS05740	0.90	-0.5
1,225,617	-		ABZR87_RS05740	0.90	-1.7
1,225,632	+				+0.2
1,225,633	-				-0.2
1,225,709	+				-0.6
1,225,725	+				-0.3
1,225,725	+				+0.4
1,225,725	+				+0.2
1,225,725	+				+1.0
1,225,725	+				+2.0
1,225,725	+				+0.3
1,225,725	+				+0.2
1,225,725	+				+2.7
1,225,725	+				+0.8
1,225,725	+				+0.2
1,225,726	-				-1.2
1,225,726	-				+0.1
1,225,726	-				+0.7
1,225,727	-				+1.1
1,225,738	+				+0.8
1,225,738	+				-0.3
1,225,738	+				+0.7
1,225,738	+				-0.5
1,225,738	+				-1.1
1,225,738	+				-0.9
1,225,738	+				+0.8
1,225,738	+				-0.5
1,225,738	+				-0.3
1,225,739	-				-1.6
1,225,739	-				-0.6
1,225,739	-				-0.3
1,225,739	-				-0.5
1,225,739	-				-0.6
1,225,739	-				-0.2
1,225,739	-				+0.9
1,225,739	-				-1.9
1,225,845	+		ABZR87_RS05745	0.12	+0.4
1,225,846	-		ABZR87_RS05745	0.12	+1.0
1,225,846	-		ABZR87_RS05745	0.12	+0.2
1,225,909	+		ABZR87_RS05745	0.20	+2.1
1,225,909	+		ABZR87_RS05745	0.20	+1.7
1,225,909	+		ABZR87_RS05745	0.20	-0.6
1,225,909	+		ABZR87_RS05745	0.20	-1.0
1,225,909	+		ABZR87_RS05745	0.20	-1.4
1,225,909	+		ABZR87_RS05745	0.20	+0.5
1,225,909	+		ABZR87_RS05745	0.20	-0.5
1,225,909	+		ABZR87_RS05745	0.20	+0.0
1,225,909	+		ABZR87_RS05745	0.20	-1.5
1,225,909	+		ABZR87_RS05745	0.20	-0.8
1,225,909	+		ABZR87_RS05745	0.20	+0.0
1,225,909	+		ABZR87_RS05745	0.20	-2.2
1,225,909	+		ABZR87_RS05745	0.20	+1.1
1,225,909	+		ABZR87_RS05745	0.20	-1.4
1,225,909	+		ABZR87_RS05745	0.20	-0.1
1,225,909	+		ABZR87_RS05745	0.20	+0.1
1,225,909	+		ABZR87_RS05745	0.20	-0.3
1,225,909	+		ABZR87_RS05745	0.20	-0.2
1,225,909	+		ABZR87_RS05745	0.20	+0.5
1,225,909	+		ABZR87_RS05745	0.20	-0.5
1,225,910	-		ABZR87_RS05745	0.20	-0.9
1,225,910	-		ABZR87_RS05745	0.20	+0.1
1,225,910	-		ABZR87_RS05745	0.20	+0.4
1,225,910	-		ABZR87_RS05745	0.20	+0.5
1,225,910	-		ABZR87_RS05745	0.20	+1.4
1,225,910	-		ABZR87_RS05745	0.20	+0.5
1,225,910	-		ABZR87_RS05745	0.20	-0.3
1,225,910	-		ABZR87_RS05745	0.20	+0.2
1,225,910	-		ABZR87_RS05745	0.20	-2.4
1,225,910	-		ABZR87_RS05745	0.20	-0.5
1,225,910	-		ABZR87_RS05745	0.20	-1.0
1,225,910	-		ABZR87_RS05745	0.20	+0.6
1,225,910	-		ABZR87_RS05745	0.20	+2.0
1,225,910	-		ABZR87_RS05745	0.20	-0.3
1,225,910	-		ABZR87_RS05745	0.20	-0.7
1,225,910	-		ABZR87_RS05745	0.20	-0.1
1,225,910	-		ABZR87_RS05745	0.20	-0.2
1,225,910	-		ABZR87_RS05745	0.20	+1.5
1,225,910	-		ABZR87_RS05745	0.20	-1.7
1,225,910	-		ABZR87_RS05745	0.20	+0.7
1,225,910	-		ABZR87_RS05745	0.20	-2.0
1,225,910	-		ABZR87_RS05745	0.20	+0.4
1,225,910	-		ABZR87_RS05745	0.20	-0.1
1,225,910	-		ABZR87_RS05745	0.20	+0.6
1,225,910	-		ABZR87_RS05745	0.20	-1.6
1,225,910	-		ABZR87_RS05745	0.20	+0.8
1,225,910	-		ABZR87_RS05745	0.20	+0.6
1,225,933	+		ABZR87_RS05745	0.23	-0.1
1,225,933	+		ABZR87_RS05745	0.23	+0.7
1,225,933	+		ABZR87_RS05745	0.23	+0.8
1,225,933	+		ABZR87_RS05745	0.23	-0.3
1,225,933	+		ABZR87_RS05745	0.23	+0.6
1,225,934	-		ABZR87_RS05745	0.23	-0.5
1,225,934	-		ABZR87_RS05745	0.23	-0.3
1,225,934	-		ABZR87_RS05745	0.23	+0.9
1,225,934	-		ABZR87_RS05745	0.23	+0.1
1,225,934	-		ABZR87_RS05745	0.23	+1.2
1,225,934	-		ABZR87_RS05745	0.23	-0.5
1,225,934	-		ABZR87_RS05745	0.23	-0.5
1,225,934	-		ABZR87_RS05745	0.23	-0.4
1,225,934	-		ABZR87_RS05745	0.23	-1.4
1,225,934	-		ABZR87_RS05745	0.23	+0.1
1,225,934	-		ABZR87_RS05745	0.23	-0.3
1,226,022	+		ABZR87_RS05745	0.35	-0.9
1,226,022	+		ABZR87_RS05745	0.35	+0.5
1,226,022	+		ABZR87_RS05745	0.35	-0.7
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