Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4545

Experiment: BHIS with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.2 vol%
5,965,302	+		BT4544	0.76	+0.6
5,965,303	-		BT4544	0.76	-1.5
5,965,303	-		BT4544	0.76	-2.3
5,965,315	+		BT4544	0.77	-1.8
5,965,316	-		BT4544	0.77	-2.8
5,965,384	+		BT4544	0.85	-0.2
5,965,458	+				-0.6
5,965,698	-				-1.0
5,965,793	-				-2.6
5,965,807	+				+0.0
5,965,807	+				-2.6
5,965,808	-				+0.0
5,965,906	-				-0.6
5,965,971	+				+0.0
5,966,178	-				-0.6
5,966,191	-				-1.0
5,966,199	+				-2.6
5,966,200	-				-3.1
5,966,200	-				-1.9
5,966,292	-		BT4545	0.36	-1.6
5,966,350	+		BT4545	0.60	-3.3
5,966,351	-		BT4545	0.60	+0.0
5,966,369	+		BT4545	0.67	-2.0
5,966,380	+		BT4545	0.72	-3.4
5,966,396	+		BT4545	0.78	+0.0
5,966,397	-		BT4545	0.79	+1.6
5,966,465	+				-2.6
5,966,476	+				+1.2
5,966,614	-				-2.0
5,966,808	-		BT4546	0.27	-2.0
5,966,846	+		BT4546	0.31	+0.9
5,966,880	+		BT4546	0.34	+0.0
5,967,068	-		BT4546	0.51	-3.7
5,967,069	+		BT4546	0.51	-2.0
5,967,070	-		BT4546	0.51	-2.3
5,967,070	-		BT4546	0.51	-0.7
5,967,070	-		BT4546	0.51	-1.0
5,967,116	-		BT4546	0.56	-1.6
5,967,170	-		BT4546	0.61	+0.0
5,967,175	-		BT4546	0.61	-0.6
5,967,356	+		BT4546	0.78	-1.1
5,967,391	+		BT4546	0.81	-0.6
5,967,397	-		BT4546	0.82	-1.3
5,967,397	-		BT4546	0.82	-1.0