Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1773

Experiment: BHIS with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.2 vol%
2,201,198	+		BT1772	0.25	-2.6
2,201,258	-		BT1772	0.29	-1.2
2,201,261	+		BT1772	0.29	+0.1
2,201,306	+		BT1772	0.33	+0.1
2,201,307	-		BT1772	0.33	+0.1
2,201,353	+		BT1772	0.37	+0.1
2,201,414	+		BT1772	0.41	+0.1
2,201,414	+		BT1772	0.41	+1.1
2,201,415	-		BT1772	0.41	+0.1
2,201,444	-		BT1772	0.44	-1.5
2,201,498	-		BT1772	0.48	-0.9
2,201,598	+		BT1772	0.56	-1.1
2,201,615	+		BT1772	0.57	-2.0
2,201,616	-		BT1772	0.57	-1.1
2,201,633	+		BT1772	0.58	-0.7
2,201,639	+		BT1772	0.59	+1.1
2,201,645	+		BT1772	0.59	+1.7
2,201,710	+		BT1772	0.64	-1.1
2,201,710	+		BT1772	0.64	-0.8
2,201,729	+		BT1772	0.66	+0.2
2,201,733	+		BT1772	0.66	-2.1
2,201,753	+		BT1772	0.68	-1.8
2,201,754	-		BT1772	0.68	-0.2
2,201,805	-		BT1772	0.72	-0.2
2,201,975	+		BT1772	0.85	-1.9
2,202,180	+				+1.9
2,202,185	-				-2.2
2,202,200	+				+0.1
2,202,235	+				-2.7
2,202,395	+		BT1773	0.10	+0.1
2,202,488	+		BT1773	0.15	-0.7
2,202,500	-		BT1773	0.16	+0.7
2,202,562	+		BT1773	0.19	-0.9
2,202,562	+		BT1773	0.19	-1.9
2,202,567	+		BT1773	0.19	-0.4
2,202,762	-		BT1773	0.29	+0.1
2,202,776	+		BT1773	0.29	+0.8
2,202,777	-		BT1773	0.29	-1.8
2,202,812	+		BT1773	0.31	-1.5
2,202,815	-		BT1773	0.31	-1.0
2,202,877	+		BT1773	0.34	-0.4
2,202,877	+		BT1773	0.34	-1.5
2,202,982	+		BT1773	0.40	-1.5
2,202,982	+		BT1773	0.40	+0.1
2,202,986	-		BT1773	0.40	-1.9
2,203,000	+		BT1773	0.41	-0.6
2,203,000	+		BT1773	0.41	-1.1
2,203,000	+		BT1773	0.41	+0.1
2,203,050	-		BT1773	0.43	-2.2
2,203,097	+		BT1773	0.45	-0.7
2,203,136	+		BT1773	0.47	+0.1
2,203,179	+		BT1773	0.49	-3.5
2,203,179	+		BT1773	0.49	-0.3
2,203,265	+		BT1773	0.54	-1.5
2,203,312	+		BT1773	0.56	-1.9
2,203,336	+		BT1773	0.57	-0.7
2,203,349	-		BT1773	0.58	-0.9
2,203,465	+		BT1773	0.64	-0.5
2,203,559	+		BT1773	0.68	-0.8
2,203,590	+		BT1773	0.70	-0.0
2,203,595	+		BT1773	0.70	-2.9
2,203,595	+		BT1773	0.70	-1.2
2,203,662	-		BT1773	0.74	-0.7
2,203,714	+		BT1773	0.76	+0.1
2,203,717	+		BT1773	0.76	-0.7
2,203,717	+		BT1773	0.76	+1.7
2,203,717	+		BT1773	0.76	-0.9
2,203,882	+		BT1773	0.85	+0.1
2,203,920	+		BT1773	0.86	-0.3
2,203,925	-		BT1773	0.87	+1.1
2,203,985	+		BT1773	0.90	-1.2
2,204,082	+				-1.3
2,204,090	-				-1.5
2,204,132	+				-2.7
2,204,164	-				-0.5
2,204,173	-				-1.1
2,204,336	-				+0.1
2,204,336	-				-2.7
2,204,482	+				-1.3
2,204,484	+				-1.5
2,204,514	+				+0.1
2,204,522	+				-1.5
2,204,783	-		BT1774	0.18	+0.1
2,204,806	+		BT1774	0.18	-3.1
2,204,935	-		BT1774	0.22	-0.9
2,204,935	-		BT1774	0.22	-2.5
2,204,935	-		BT1774	0.22	+0.1
2,205,015	+		BT1774	0.25	-1.5