Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS20965

Experiment: Dodecandioic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dodecandioic (C)
1,088,283	+		ABZR87_RS20960	0.61	+0.2
1,088,283	+		ABZR87_RS20960	0.61	+0.7
1,088,369	+		ABZR87_RS20960	0.66	+1.7
1,088,369	+		ABZR87_RS20960	0.66	+1.2
1,088,370	-		ABZR87_RS20960	0.66	-0.0
1,088,370	-		ABZR87_RS20960	0.66	+0.6
1,088,516	+		ABZR87_RS20960	0.75	+1.8
1,088,516	+		ABZR87_RS20960	0.75	+0.0
1,088,714	+		ABZR87_RS20960	0.88	-0.1
1,088,714	+		ABZR87_RS20960	0.88	+0.3
1,088,715	-		ABZR87_RS20960	0.88	-0.4
1,088,735	+		ABZR87_RS20960	0.89	+0.5
1,088,735	+		ABZR87_RS20960	0.89	-0.1
1,088,735	+		ABZR87_RS20960	0.89	-0.6
1,088,735	+		ABZR87_RS20960	0.89	-0.1
1,088,736	-		ABZR87_RS20960	0.89	+0.6
1,088,736	-		ABZR87_RS20960	0.89	-0.1
1,088,736	-		ABZR87_RS20960	0.89	-0.3
1,088,956	-				-0.5
1,088,963	+				-0.0
1,088,964	-				+0.5
1,088,964	-				-1.2
1,089,020	+				+1.1
1,089,020	+				+0.7
1,089,023	-				-1.0
1,089,023	-				+1.2
1,089,023	-				-0.6
1,089,027	+				+0.7
1,089,027	+				-0.3
1,089,027	+				+0.4
1,089,027	+				-1.3
1,089,027	+				-0.1
1,089,027	+				+0.9
1,089,028	-				+0.1
1,089,028	-				+0.3
1,089,028	-				-0.1
1,089,028	-				+0.2
1,089,282	+		ABZR87_RS20965	0.12	-0.9
1,089,282	+		ABZR87_RS20965	0.12	+0.4
1,089,282	+		ABZR87_RS20965	0.12	+0.1
1,089,282	+		ABZR87_RS20965	0.12	+0.6
1,089,283	-		ABZR87_RS20965	0.12	-0.6
1,089,283	-		ABZR87_RS20965	0.12	+0.7
1,089,283	-		ABZR87_RS20965	0.12	+1.6
1,089,283	-		ABZR87_RS20965	0.12	+1.4
1,089,283	-		ABZR87_RS20965	0.12	-0.2
1,089,283	-		ABZR87_RS20965	0.12	+1.9
1,089,288	+		ABZR87_RS20965	0.13	-0.1
1,089,288	+		ABZR87_RS20965	0.13	-0.9
1,089,288	+		ABZR87_RS20965	0.13	+0.4
1,089,289	-		ABZR87_RS20965	0.13	+1.2
1,089,289	-		ABZR87_RS20965	0.13	+1.2
1,089,354	+		ABZR87_RS20965	0.20	-0.1
1,089,354	+		ABZR87_RS20965	0.20	+0.1
1,089,355	-		ABZR87_RS20965	0.20	+0.6
1,089,355	-		ABZR87_RS20965	0.20	+0.4
1,089,355	-		ABZR87_RS20965	0.20	-0.3
1,089,372	+		ABZR87_RS20965	0.22	+1.0
1,089,372	+		ABZR87_RS20965	0.22	-0.3
1,089,372	+		ABZR87_RS20965	0.22	+0.1
1,089,372	+		ABZR87_RS20965	0.22	-1.1
1,089,373	-		ABZR87_RS20965	0.22	+1.6
1,089,373	-		ABZR87_RS20965	0.22	+1.2
1,089,373	-		ABZR87_RS20965	0.22	+0.3
1,089,373	-		ABZR87_RS20965	0.22	+0.7
1,089,515	+		ABZR87_RS20965	0.37	+0.8
1,089,516	-		ABZR87_RS20965	0.37	+0.4
1,089,585	+		ABZR87_RS20965	0.44	-0.3
1,089,585	+		ABZR87_RS20965	0.44	-0.2
1,089,585	+		ABZR87_RS20965	0.44	+0.8
1,089,585	+		ABZR87_RS20965	0.44	-1.2
1,089,585	+		ABZR87_RS20965	0.44	+0.1
1,089,585	+		ABZR87_RS20965	0.44	+0.8
1,089,585	+		ABZR87_RS20965	0.44	-0.0
1,089,585	+		ABZR87_RS20965	0.44	-0.2
1,089,586	-		ABZR87_RS20965	0.44	+1.0
1,089,586	-		ABZR87_RS20965	0.44	-0.5
1,089,586	-		ABZR87_RS20965	0.44	+0.3
1,089,606	+		ABZR87_RS20965	0.47	+0.6
1,089,606	+		ABZR87_RS20965	0.47	+0.7
1,089,606	+		ABZR87_RS20965	0.47	+0.8
1,089,606	+		ABZR87_RS20965	0.47	+0.2
1,089,606	+		ABZR87_RS20965	0.47	+0.1
1,089,606	+		ABZR87_RS20965	0.47	+0.2
1,089,607	-		ABZR87_RS20965	0.47	-1.3
1,089,607	-		ABZR87_RS20965	0.47	+0.5
1,089,607	-		ABZR87_RS20965	0.47	-1.2
1,089,607	-		ABZR87_RS20965	0.47	+0.5
1,089,607	-		ABZR87_RS20965	0.47	+0.5
1,089,607	-		ABZR87_RS20965	0.47	-0.5
1,089,607	-		ABZR87_RS20965	0.47	+2.6
1,089,607	-		ABZR87_RS20965	0.47	+0.7
1,089,607	-		ABZR87_RS20965	0.47	+0.0
1,089,750	+		ABZR87_RS20965	0.62	+0.5
1,089,753	+		ABZR87_RS20965	0.62	-0.6
1,089,753	+		ABZR87_RS20965	0.62	+0.7
1,089,754	-		ABZR87_RS20965	0.62	-0.3
1,089,754	-		ABZR87_RS20965	0.62	-0.6
1,089,781	+		ABZR87_RS20965	0.65	-0.3
1,089,803	+		ABZR87_RS20965	0.68	-0.3
1,089,804	-		ABZR87_RS20965	0.68	+0.1
1,089,804	-		ABZR87_RS20965	0.68	+0.7
1,089,860	-		ABZR87_RS20965	0.74	-0.8
1,089,988	+		ABZR87_RS20965	0.87	-0.3
1,089,989	-		ABZR87_RS20965	0.87	+0.6
1,090,074	+				+0.3
1,090,163	+				+0.3
1,090,163	+				-0.2
1,090,163	+				+0.0
1,090,163	+				+0.3
1,090,163	+				-0.6
1,090,164	-				-1.7
1,090,164	-				-0.2
1,090,260	+				-1.8
1,090,260	+				+0.5
1,090,261	-				+0.1
1,090,314	+				-0.3
1,090,314	+				+0.3
1,090,676	+		ABZR87_RS20970	0.41	+0.1
1,090,676	+		ABZR87_RS20970	0.41	+0.9
1,090,676	+		ABZR87_RS20970	0.41	-0.1
1,090,676	+		ABZR87_RS20970	0.41	-0.0
1,090,677	-		ABZR87_RS20970	0.41	-0.5
1,090,736	+		ABZR87_RS20970	0.47	-0.3
1,090,736	+		ABZR87_RS20970	0.47	-0.3
1,090,736	+		ABZR87_RS20970	0.47	+0.6
1,090,736	+		ABZR87_RS20970	0.47	+0.1
1,090,736	+		ABZR87_RS20970	0.47	+0.6
1,090,736	+		ABZR87_RS20970	0.47	-1.7
1,090,736	+		ABZR87_RS20970	0.47	+0.4
1,090,737	-		ABZR87_RS20970	0.47	-0.9
1,090,737	-		ABZR87_RS20970	0.47	+0.3
1,090,800	+		ABZR87_RS20970	0.54	+1.7
1,090,801	-		ABZR87_RS20970	0.54	+0.2
1,090,801	-		ABZR87_RS20970	0.54	-1.5
1,090,886	+		ABZR87_RS20970	0.63	-0.2
1,090,886	+		ABZR87_RS20970	0.63	-0.0
1,090,886	+		ABZR87_RS20970	0.63	+0.1
1,090,886	+		ABZR87_RS20970	0.63	+0.4
1,090,886	+		ABZR87_RS20970	0.63	+1.5
1,090,887	-		ABZR87_RS20970	0.63	-0.7
1,090,887	-		ABZR87_RS20970	0.63	-0.2
1,090,887	-		ABZR87_RS20970	0.63	+1.8
1,090,887	-		ABZR87_RS20970	0.63	-0.3
1,090,991	+		ABZR87_RS20970	0.74	+0.1
1,090,992	-		ABZR87_RS20970	0.74	-0.1
1,090,992	-		ABZR87_RS20970	0.74	-0.1
1,091,045	+		ABZR87_RS20970	0.79	+0.6
1,091,045	+		ABZR87_RS20970	0.79	-1.5
1,091,045	+		ABZR87_RS20970	0.79	-0.1
1,091,045	+		ABZR87_RS20970	0.79	+0.7
1,091,046	-		ABZR87_RS20970	0.79	-0.3
1,091,046	-		ABZR87_RS20970	0.79	-0.2
1,091,046	-		ABZR87_RS20970	0.79	-1.8