Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS20165 and ABZR87_RS20170 are separated by 5 nucleotides ABZR87_RS20170 and ABZR87_RS20175 are separated by 38 nucleotides ABZR87_RS20175 and ABZR87_RS20180 are separated by 170 nucleotides
ABZR87_RS20165: ABZR87_RS20165 - TIGR04222 domain-containing membrane protein, at 907,630 to 909,072
_RS20165
ABZR87_RS20170: ABZR87_RS20170 - type VI secretion system protein TssA, at 909,078 to 910,154
_RS20170
ABZR87_RS20175: ABZR87_RS20175 - hypothetical protein, at 910,193 to 910,600
_RS20175
ABZR87_RS20180: ABZR87_RS20180 - DUF6708 domain-containing protein, at 910,771 to 911,268
_RS20180
Position (kb) 909
910
911 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 908.081 kb on + strand, within ABZR87_RS20165 at 908.082 kb on - strand, within ABZR87_RS20165 at 908.082 kb on - strand, within ABZR87_RS20165 at 908.152 kb on + strand, within ABZR87_RS20165 at 908.153 kb on - strand, within ABZR87_RS20165 at 908.153 kb on - strand, within ABZR87_RS20165 at 908.179 kb on + strand, within ABZR87_RS20165 at 908.179 kb on + strand, within ABZR87_RS20165 at 908.180 kb on - strand, within ABZR87_RS20165 at 908.237 kb on - strand, within ABZR87_RS20165 at 908.237 kb on - strand, within ABZR87_RS20165 at 908.237 kb on - strand, within ABZR87_RS20165 at 908.237 kb on - strand, within ABZR87_RS20165 at 908.416 kb on + strand, within ABZR87_RS20165 at 908.416 kb on + strand, within ABZR87_RS20165 at 908.416 kb on + strand, within ABZR87_RS20165 at 908.416 kb on + strand, within ABZR87_RS20165 at 908.416 kb on + strand, within ABZR87_RS20165 at 908.416 kb on + strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.417 kb on - strand, within ABZR87_RS20165 at 908.731 kb on + strand, within ABZR87_RS20165 at 908.732 kb on - strand, within ABZR87_RS20165 at 908.732 kb on - strand, within ABZR87_RS20165 at 908.809 kb on + strand, within ABZR87_RS20165 at 909.031 kb on - strand at 909.031 kb on - strand at 909.071 kb on - strand at 909.217 kb on + strand, within ABZR87_RS20170 at 909.217 kb on + strand, within ABZR87_RS20170 at 909.218 kb on - strand, within ABZR87_RS20170 at 909.218 kb on - strand, within ABZR87_RS20170 at 909.218 kb on - strand, within ABZR87_RS20170 at 909.559 kb on + strand, within ABZR87_RS20170 at 909.559 kb on + strand, within ABZR87_RS20170 at 909.559 kb on + strand, within ABZR87_RS20170 at 909.559 kb on + strand, within ABZR87_RS20170 at 909.700 kb on + strand, within ABZR87_RS20170 at 909.720 kb on + strand, within ABZR87_RS20170 at 909.720 kb on + strand, within ABZR87_RS20170 at 909.720 kb on + strand, within ABZR87_RS20170 at 909.721 kb on - strand, within ABZR87_RS20170 at 909.721 kb on - strand, within ABZR87_RS20170 at 909.818 kb on - strand, within ABZR87_RS20170 at 910.287 kb on + strand, within ABZR87_RS20175 at 910.287 kb on + strand, within ABZR87_RS20175 at 910.288 kb on - strand, within ABZR87_RS20175 at 910.449 kb on + strand, within ABZR87_RS20175 at 910.449 kb on + strand, within ABZR87_RS20175 at 910.450 kb on - strand, within ABZR87_RS20175 at 910.450 kb on - strand, within ABZR87_RS20175 at 910.450 kb on - strand, within ABZR87_RS20175 at 910.483 kb on - strand, within ABZR87_RS20175 at 910.504 kb on - strand, within ABZR87_RS20175 at 910.600 kb on + strand at 910.601 kb on - strand at 910.601 kb on - strand at 910.654 kb on + strand at 910.655 kb on - strand at 910.655 kb on - strand at 910.655 kb on - strand at 910.655 kb on - strand at 910.655 kb on - strand at 910.688 kb on + strand at 910.850 kb on + strand, within ABZR87_RS20180 at 910.861 kb on - strand, within ABZR87_RS20180 at 910.932 kb on + strand, within ABZR87_RS20180 at 910.932 kb on + strand, within ABZR87_RS20180 at 910.933 kb on - strand, within ABZR87_RS20180 at 910.979 kb on + strand, within ABZR87_RS20180 at 910.979 kb on + strand, within ABZR87_RS20180 at 910.979 kb on + strand, within ABZR87_RS20180 at 910.979 kb on + strand, within ABZR87_RS20180 at 910.980 kb on - strand, within ABZR87_RS20180 at 911.011 kb on - strand, within ABZR87_RS20180 at 911.073 kb on + strand, within ABZR87_RS20180 at 911.075 kb on + strand, within ABZR87_RS20180 at 911.075 kb on + strand, within ABZR87_RS20180 at 911.075 kb on + strand, within ABZR87_RS20180 at 911.075 kb on + strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.076 kb on - strand, within ABZR87_RS20180 at 911.151 kb on + strand, within ABZR87_RS20180 at 911.151 kb on + strand, within ABZR87_RS20180
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 908,081 + ABZR87_RS20165 0.31 -0.0 908,082 - ABZR87_RS20165 0.31 -1.4 908,082 - ABZR87_RS20165 0.31 -0.2 908,152 + ABZR87_RS20165 0.36 +4.1 908,153 - ABZR87_RS20165 0.36 -0.4 908,153 - ABZR87_RS20165 0.36 +0.9 908,179 + ABZR87_RS20165 0.38 -0.0 908,179 + ABZR87_RS20165 0.38 -0.8 908,180 - ABZR87_RS20165 0.38 -0.6 908,237 - ABZR87_RS20165 0.42 -0.7 908,237 - ABZR87_RS20165 0.42 +0.7 908,237 - ABZR87_RS20165 0.42 +1.5 908,237 - ABZR87_RS20165 0.42 -0.3 908,416 + ABZR87_RS20165 0.54 -0.3 908,416 + ABZR87_RS20165 0.54 +0.6 908,416 + ABZR87_RS20165 0.54 -0.3 908,416 + ABZR87_RS20165 0.54 +0.5 908,416 + ABZR87_RS20165 0.54 -0.8 908,416 + ABZR87_RS20165 0.54 +1.7 908,417 - ABZR87_RS20165 0.55 -0.1 908,417 - ABZR87_RS20165 0.55 -1.3 908,417 - ABZR87_RS20165 0.55 +0.1 908,417 - ABZR87_RS20165 0.55 +0.2 908,417 - ABZR87_RS20165 0.55 +0.4 908,417 - ABZR87_RS20165 0.55 +0.2 908,417 - ABZR87_RS20165 0.55 +0.7 908,417 - ABZR87_RS20165 0.55 -0.2 908,731 + ABZR87_RS20165 0.76 +0.1 908,732 - ABZR87_RS20165 0.76 +0.2 908,732 - ABZR87_RS20165 0.76 +0.1 908,809 + ABZR87_RS20165 0.82 -0.9 909,031 - -0.9 909,031 - -0.4 909,071 - +1.1 909,217 + ABZR87_RS20170 0.13 -0.6 909,217 + ABZR87_RS20170 0.13 +0.5 909,218 - ABZR87_RS20170 0.13 -0.2 909,218 - ABZR87_RS20170 0.13 +0.8 909,218 - ABZR87_RS20170 0.13 +0.6 909,559 + ABZR87_RS20170 0.45 +0.6 909,559 + ABZR87_RS20170 0.45 +0.1 909,559 + ABZR87_RS20170 0.45 +0.5 909,559 + ABZR87_RS20170 0.45 -0.1 909,700 + ABZR87_RS20170 0.58 +0.0 909,720 + ABZR87_RS20170 0.60 +0.4 909,720 + ABZR87_RS20170 0.60 +0.9 909,720 + ABZR87_RS20170 0.60 -0.2 909,721 - ABZR87_RS20170 0.60 +1.5 909,721 - ABZR87_RS20170 0.60 +1.1 909,818 - ABZR87_RS20170 0.69 -1.5 910,287 + ABZR87_RS20175 0.23 -0.0 910,287 + ABZR87_RS20175 0.23 +1.8 910,288 - ABZR87_RS20175 0.23 -0.8 910,449 + ABZR87_RS20175 0.63 -0.6 910,449 + ABZR87_RS20175 0.63 -0.4 910,450 - ABZR87_RS20175 0.63 +0.2 910,450 - ABZR87_RS20175 0.63 -0.0 910,450 - ABZR87_RS20175 0.63 -0.3 910,483 - ABZR87_RS20175 0.71 +1.0 910,504 - ABZR87_RS20175 0.76 +0.9 910,600 + -1.2 910,601 - +0.1 910,601 - +0.0 910,654 + -0.5 910,655 - +0.1 910,655 - +0.4 910,655 - +0.0 910,655 - +0.1 910,655 - +0.2 910,688 + +0.8 910,850 + ABZR87_RS20180 0.16 +0.8 910,861 - ABZR87_RS20180 0.18 +0.2 910,932 + ABZR87_RS20180 0.32 -0.5 910,932 + ABZR87_RS20180 0.32 -1.1 910,933 - ABZR87_RS20180 0.33 -0.4 910,979 + ABZR87_RS20180 0.42 -1.4 910,979 + ABZR87_RS20180 0.42 +0.5 910,979 + ABZR87_RS20180 0.42 -0.0 910,979 + ABZR87_RS20180 0.42 +1.8 910,980 - ABZR87_RS20180 0.42 +0.7 911,011 - ABZR87_RS20180 0.48 +0.9 911,073 + ABZR87_RS20180 0.61 +1.5 911,075 + ABZR87_RS20180 0.61 +0.0 911,075 + ABZR87_RS20180 0.61 +0.3 911,075 + ABZR87_RS20180 0.61 +0.1 911,075 + ABZR87_RS20180 0.61 +1.3 911,076 - ABZR87_RS20180 0.61 +1.6 911,076 - ABZR87_RS20180 0.61 -0.6 911,076 - ABZR87_RS20180 0.61 -0.7 911,076 - ABZR87_RS20180 0.61 +0.9 911,076 - ABZR87_RS20180 0.61 +1.0 911,076 - ABZR87_RS20180 0.61 -0.1 911,076 - ABZR87_RS20180 0.61 +0.4 911,076 - ABZR87_RS20180 0.61 -0.2 911,151 + ABZR87_RS20180 0.76 +0.3 911,151 + ABZR87_RS20180 0.76 +0.9
Or see this region's nucleotide sequence