Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS20095 and ABZR87_RS20100 are separated by 244 nucleotides ABZR87_RS20100 and ABZR87_RS20105 are separated by 194 nucleotides
ABZR87_RS20095: ABZR87_RS20095 - class II glutamine amidotransferase, at 882,286 to 883,179
_RS20095
ABZR87_RS20100: ABZR87_RS20100 - excinuclease ABC subunit UvrA, at 883,424 to 889,273
_RS20100
ABZR87_RS20105: ABZR87_RS20105 - flagellar filament capping protein FliD, at 889,468 to 891,504
_RS20105
Position (kb) 883
884
885
886
887
888
889
890 Strain fitness (log2 ratio) -2
-1
0
1
2 at 882.425 kb on + strand, within ABZR87_RS20095 at 882.425 kb on + strand, within ABZR87_RS20095 at 882.426 kb on - strand, within ABZR87_RS20095 at 882.426 kb on - strand, within ABZR87_RS20095 at 882.442 kb on + strand, within ABZR87_RS20095 at 882.643 kb on + strand, within ABZR87_RS20095 at 882.643 kb on + strand, within ABZR87_RS20095 at 882.644 kb on - strand, within ABZR87_RS20095 at 882.832 kb on + strand, within ABZR87_RS20095 at 882.843 kb on + strand, within ABZR87_RS20095 at 882.843 kb on + strand, within ABZR87_RS20095 at 882.843 kb on + strand, within ABZR87_RS20095 at 882.843 kb on + strand, within ABZR87_RS20095 at 882.843 kb on + strand, within ABZR87_RS20095 at 882.844 kb on - strand, within ABZR87_RS20095 at 882.844 kb on - strand, within ABZR87_RS20095 at 882.844 kb on - strand, within ABZR87_RS20095 at 882.844 kb on - strand, within ABZR87_RS20095 at 882.844 kb on - strand, within ABZR87_RS20095 at 882.844 kb on - strand, within ABZR87_RS20095 at 882.955 kb on + strand, within ABZR87_RS20095 at 882.956 kb on - strand, within ABZR87_RS20095 at 882.956 kb on - strand, within ABZR87_RS20095 at 883.159 kb on + strand at 883.200 kb on + strand at 883.200 kb on + strand at 883.200 kb on + strand at 883.200 kb on + strand at 883.200 kb on + strand at 883.201 kb on - strand at 883.201 kb on - strand at 883.201 kb on - strand at 883.201 kb on - strand at 883.201 kb on - strand at 883.299 kb on + strand at 883.318 kb on + strand at 883.319 kb on - strand at 883.319 kb on - strand at 883.319 kb on - strand at 883.319 kb on - strand at 883.326 kb on + strand at 883.327 kb on - strand at 883.327 kb on - strand at 883.368 kb on + strand at 883.368 kb on + strand at 883.368 kb on + strand at 883.368 kb on + strand at 883.368 kb on + strand at 883.368 kb on + strand at 883.368 kb on + strand at 883.368 kb on + strand at 883.369 kb on - strand at 883.369 kb on - strand at 883.369 kb on - strand at 883.369 kb on - strand at 883.396 kb on + strand at 883.396 kb on + strand at 883.397 kb on - strand at 883.565 kb on + strand at 883.587 kb on - strand at 883.608 kb on - strand at 883.608 kb on - strand at 883.835 kb on + strand at 883.835 kb on + strand at 883.836 kb on - strand at 883.955 kb on + strand at 883.955 kb on + strand at 883.958 kb on - strand at 883.958 kb on - strand at 883.958 kb on - strand at 883.958 kb on - strand at 883.958 kb on - strand at 884.118 kb on - strand, within ABZR87_RS20100 at 884.118 kb on - strand, within ABZR87_RS20100 at 884.118 kb on - strand, within ABZR87_RS20100 at 884.243 kb on + strand, within ABZR87_RS20100 at 884.396 kb on + strand, within ABZR87_RS20100 at 884.516 kb on + strand, within ABZR87_RS20100 at 884.517 kb on - strand, within ABZR87_RS20100 at 884.540 kb on + strand, within ABZR87_RS20100 at 884.540 kb on + strand, within ABZR87_RS20100 at 884.541 kb on - strand, within ABZR87_RS20100 at 884.558 kb on + strand, within ABZR87_RS20100 at 884.559 kb on + strand, within ABZR87_RS20100 at 884.559 kb on - strand, within ABZR87_RS20100 at 884.559 kb on - strand, within ABZR87_RS20100 at 884.559 kb on - strand, within ABZR87_RS20100 at 884.559 kb on - strand, within ABZR87_RS20100 at 884.559 kb on - strand, within ABZR87_RS20100 at 884.559 kb on - strand, within ABZR87_RS20100 at 884.591 kb on + strand, within ABZR87_RS20100 at 884.592 kb on - strand, within ABZR87_RS20100 at 884.592 kb on - strand, within ABZR87_RS20100 at 884.592 kb on - strand, within ABZR87_RS20100 at 884.592 kb on - strand, within ABZR87_RS20100 at 884.601 kb on - strand, within ABZR87_RS20100 at 884.601 kb on - strand, within ABZR87_RS20100 at 884.601 kb on - strand, within ABZR87_RS20100 at 884.894 kb on + strand, within ABZR87_RS20100 at 884.895 kb on - strand, within ABZR87_RS20100 at 884.895 kb on - strand, within ABZR87_RS20100 at 884.895 kb on - strand, within ABZR87_RS20100 at 884.895 kb on - strand, within ABZR87_RS20100 at 884.895 kb on - strand, within ABZR87_RS20100 at 884.895 kb on - strand, within ABZR87_RS20100 at 885.257 kb on + strand, within ABZR87_RS20100 at 885.257 kb on + strand, within ABZR87_RS20100 at 885.257 kb on + strand, within ABZR87_RS20100 at 885.257 kb on + strand, within ABZR87_RS20100 at 885.257 kb on + strand, within ABZR87_RS20100 at 885.257 kb on + strand, within ABZR87_RS20100 at 885.258 kb on - strand, within ABZR87_RS20100 at 885.258 kb on - strand, within ABZR87_RS20100 at 885.602 kb on + strand, within ABZR87_RS20100 at 885.602 kb on + strand, within ABZR87_RS20100 at 885.602 kb on + strand, within ABZR87_RS20100 at 885.602 kb on + strand, within ABZR87_RS20100 at 885.602 kb on + strand, within ABZR87_RS20100 at 885.602 kb on + strand, within ABZR87_RS20100 at 885.602 kb on + strand, within ABZR87_RS20100 at 885.603 kb on - strand, within ABZR87_RS20100 at 885.603 kb on - strand, within ABZR87_RS20100 at 885.603 kb on - strand, within ABZR87_RS20100 at 885.603 kb on - strand, within ABZR87_RS20100 at 885.669 kb on - strand, within ABZR87_RS20100 at 885.770 kb on + strand, within ABZR87_RS20100 at 885.770 kb on + strand, within ABZR87_RS20100 at 885.771 kb on - strand, within ABZR87_RS20100 at 885.771 kb on - strand, within ABZR87_RS20100 at 885.771 kb on - strand, within ABZR87_RS20100 at 885.771 kb on - strand, within ABZR87_RS20100 at 885.771 kb on - strand, within ABZR87_RS20100 at 885.962 kb on + strand, within ABZR87_RS20100 at 885.962 kb on + strand, within ABZR87_RS20100 at 885.962 kb on + strand, within ABZR87_RS20100 at 885.963 kb on - strand, within ABZR87_RS20100 at 885.963 kb on - strand, within ABZR87_RS20100 at 886.370 kb on + strand, within ABZR87_RS20100 at 886.371 kb on - strand, within ABZR87_RS20100 at 886.371 kb on - strand, within ABZR87_RS20100 at 886.371 kb on - strand, within ABZR87_RS20100 at 886.632 kb on - strand, within ABZR87_RS20100 at 886.652 kb on + strand, within ABZR87_RS20100 at 886.653 kb on - strand, within ABZR87_RS20100 at 886.653 kb on - strand, within ABZR87_RS20100 at 886.653 kb on - strand, within ABZR87_RS20100 at 886.703 kb on + strand, within ABZR87_RS20100 at 886.704 kb on - strand, within ABZR87_RS20100 at 886.808 kb on + strand, within ABZR87_RS20100 at 886.808 kb on + strand, within ABZR87_RS20100 at 886.809 kb on - strand, within ABZR87_RS20100 at 886.809 kb on - strand, within ABZR87_RS20100 at 886.959 kb on - strand, within ABZR87_RS20100 at 886.994 kb on + strand, within ABZR87_RS20100 at 886.996 kb on + strand, within ABZR87_RS20100 at 886.996 kb on + strand, within ABZR87_RS20100 at 886.996 kb on + strand, within ABZR87_RS20100 at 886.996 kb on + strand, within ABZR87_RS20100 at 886.997 kb on - strand, within ABZR87_RS20100 at 886.997 kb on - strand, within ABZR87_RS20100 at 886.997 kb on - strand, within ABZR87_RS20100 at 886.997 kb on - strand, within ABZR87_RS20100 at 886.997 kb on - strand, within ABZR87_RS20100 at 887.288 kb on + strand, within ABZR87_RS20100 at 887.288 kb on + strand, within ABZR87_RS20100 at 887.289 kb on - strand, within ABZR87_RS20100 at 887.289 kb on - strand, within ABZR87_RS20100 at 887.319 kb on - strand, within ABZR87_RS20100 at 887.319 kb on - strand, within ABZR87_RS20100 at 887.699 kb on + strand, within ABZR87_RS20100 at 887.700 kb on - strand, within ABZR87_RS20100 at 887.752 kb on + strand, within ABZR87_RS20100 at 887.753 kb on - strand, within ABZR87_RS20100 at 887.798 kb on + strand, within ABZR87_RS20100 at 887.799 kb on - strand, within ABZR87_RS20100 at 888.209 kb on - strand, within ABZR87_RS20100 at 888.209 kb on - strand, within ABZR87_RS20100 at 888.488 kb on + strand, within ABZR87_RS20100 at 888.488 kb on + strand, within ABZR87_RS20100 at 888.488 kb on + strand, within ABZR87_RS20100 at 888.488 kb on + strand, within ABZR87_RS20100 at 888.488 kb on + strand, within ABZR87_RS20100 at 888.489 kb on - strand, within ABZR87_RS20100 at 888.555 kb on - strand, within ABZR87_RS20100 at 888.965 kb on + strand at 888.965 kb on + strand at 888.965 kb on + strand at 888.965 kb on + strand at 888.965 kb on + strand at 888.965 kb on + strand at 888.966 kb on - strand at 888.966 kb on - strand at 888.966 kb on - strand at 888.966 kb on - strand at 888.966 kb on - strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.495 kb on + strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.496 kb on - strand at 889.554 kb on + strand at 889.554 kb on + strand at 889.555 kb on - strand at 889.555 kb on - strand at 889.555 kb on - strand at 889.555 kb on - strand at 889.555 kb on - strand at 889.783 kb on + strand, within ABZR87_RS20105 at 889.783 kb on + strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.784 kb on - strand, within ABZR87_RS20105 at 889.820 kb on + strand, within ABZR87_RS20105 at 889.933 kb on + strand, within ABZR87_RS20105 at 889.933 kb on + strand, within ABZR87_RS20105 at 889.933 kb on + strand, within ABZR87_RS20105 at 889.934 kb on - strand, within ABZR87_RS20105 at 889.934 kb on - strand, within ABZR87_RS20105 at 889.934 kb on - strand, within ABZR87_RS20105
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 882,425 + ABZR87_RS20095 0.16 +0.1 882,425 + ABZR87_RS20095 0.16 +0.4 882,426 - ABZR87_RS20095 0.16 +1.1 882,426 - ABZR87_RS20095 0.16 -1.5 882,442 + ABZR87_RS20095 0.17 +0.5 882,643 + ABZR87_RS20095 0.40 +0.8 882,643 + ABZR87_RS20095 0.40 +0.3 882,644 - ABZR87_RS20095 0.40 +1.4 882,832 + ABZR87_RS20095 0.61 -0.5 882,843 + ABZR87_RS20095 0.62 -2.3 882,843 + ABZR87_RS20095 0.62 +0.8 882,843 + ABZR87_RS20095 0.62 +0.2 882,843 + ABZR87_RS20095 0.62 +1.0 882,843 + ABZR87_RS20095 0.62 -0.3 882,844 - ABZR87_RS20095 0.62 +0.7 882,844 - ABZR87_RS20095 0.62 -1.3 882,844 - ABZR87_RS20095 0.62 +1.0 882,844 - ABZR87_RS20095 0.62 -0.4 882,844 - ABZR87_RS20095 0.62 +0.5 882,844 - ABZR87_RS20095 0.62 +1.0 882,955 + ABZR87_RS20095 0.75 -0.9 882,956 - ABZR87_RS20095 0.75 -0.4 882,956 - ABZR87_RS20095 0.75 +0.8 883,159 + -1.1 883,200 + -1.7 883,200 + +0.3 883,200 + +1.8 883,200 + +0.6 883,200 + +1.5 883,201 - -1.2 883,201 - +0.6 883,201 - +1.3 883,201 - -0.5 883,201 - +0.9 883,299 + -0.4 883,318 + -0.4 883,319 - -0.4 883,319 - +1.0 883,319 - +0.4 883,319 - +1.3 883,326 + -0.1 883,327 - -2.0 883,327 - -0.5 883,368 + -1.5 883,368 + +0.4 883,368 + +0.4 883,368 + -0.2 883,368 + +0.2 883,368 + -0.7 883,368 + -0.6 883,368 + -0.2 883,369 - +0.2 883,369 - -0.5 883,369 - +1.0 883,369 - -0.9 883,396 + +0.5 883,396 + -0.7 883,397 - +0.7 883,565 + +0.8 883,587 - +1.5 883,608 - -0.3 883,608 - -0.1 883,835 + -0.1 883,835 + -1.0 883,836 - +0.6 883,955 + -0.6 883,955 + +1.4 883,958 - -0.5 883,958 - +0.1 883,958 - +0.8 883,958 - +0.7 883,958 - +0.4 884,118 - ABZR87_RS20100 0.12 -0.2 884,118 - ABZR87_RS20100 0.12 -1.8 884,118 - ABZR87_RS20100 0.12 -0.1 884,243 + ABZR87_RS20100 0.14 +1.8 884,396 + ABZR87_RS20100 0.17 +0.9 884,516 + ABZR87_RS20100 0.19 -0.4 884,517 - ABZR87_RS20100 0.19 +1.2 884,540 + ABZR87_RS20100 0.19 +1.0 884,540 + ABZR87_RS20100 0.19 -0.7 884,541 - ABZR87_RS20100 0.19 +0.4 884,558 + ABZR87_RS20100 0.19 +1.4 884,559 + ABZR87_RS20100 0.19 -0.9 884,559 - ABZR87_RS20100 0.19 -0.6 884,559 - ABZR87_RS20100 0.19 -0.6 884,559 - ABZR87_RS20100 0.19 +1.3 884,559 - ABZR87_RS20100 0.19 +0.5 884,559 - ABZR87_RS20100 0.19 +1.3 884,559 - ABZR87_RS20100 0.19 -0.2 884,591 + ABZR87_RS20100 0.20 +1.0 884,592 - ABZR87_RS20100 0.20 -0.5 884,592 - ABZR87_RS20100 0.20 +1.5 884,592 - ABZR87_RS20100 0.20 +1.0 884,592 - ABZR87_RS20100 0.20 +0.9 884,601 - ABZR87_RS20100 0.20 -1.0 884,601 - ABZR87_RS20100 0.20 -1.0 884,601 - ABZR87_RS20100 0.20 -1.5 884,894 + ABZR87_RS20100 0.25 -0.3 884,895 - ABZR87_RS20100 0.25 -1.3 884,895 - ABZR87_RS20100 0.25 -0.0 884,895 - ABZR87_RS20100 0.25 +0.4 884,895 - ABZR87_RS20100 0.25 +0.7 884,895 - ABZR87_RS20100 0.25 +0.5 884,895 - ABZR87_RS20100 0.25 -1.2 885,257 + ABZR87_RS20100 0.31 +1.2 885,257 + ABZR87_RS20100 0.31 +0.2 885,257 + ABZR87_RS20100 0.31 +0.0 885,257 + ABZR87_RS20100 0.31 +0.9 885,257 + ABZR87_RS20100 0.31 +0.7 885,257 + ABZR87_RS20100 0.31 +0.9 885,258 - ABZR87_RS20100 0.31 +0.2 885,258 - ABZR87_RS20100 0.31 -1.0 885,602 + ABZR87_RS20100 0.37 +0.2 885,602 + ABZR87_RS20100 0.37 +1.0 885,602 + ABZR87_RS20100 0.37 -1.1 885,602 + ABZR87_RS20100 0.37 +0.1 885,602 + ABZR87_RS20100 0.37 +1.1 885,602 + ABZR87_RS20100 0.37 +0.6 885,602 + ABZR87_RS20100 0.37 +0.4 885,603 - ABZR87_RS20100 0.37 +0.1 885,603 - ABZR87_RS20100 0.37 -0.1 885,603 - ABZR87_RS20100 0.37 +0.4 885,603 - ABZR87_RS20100 0.37 -0.5 885,669 - ABZR87_RS20100 0.38 -0.3 885,770 + ABZR87_RS20100 0.40 -0.4 885,770 + ABZR87_RS20100 0.40 -0.0 885,771 - ABZR87_RS20100 0.40 +0.1 885,771 - ABZR87_RS20100 0.40 -0.6 885,771 - ABZR87_RS20100 0.40 +1.1 885,771 - ABZR87_RS20100 0.40 -0.2 885,771 - ABZR87_RS20100 0.40 +0.5 885,962 + ABZR87_RS20100 0.43 -1.0 885,962 + ABZR87_RS20100 0.43 -0.4 885,962 + ABZR87_RS20100 0.43 +0.6 885,963 - ABZR87_RS20100 0.43 +0.6 885,963 - ABZR87_RS20100 0.43 +0.8 886,370 + ABZR87_RS20100 0.50 -0.5 886,371 - ABZR87_RS20100 0.50 -1.2 886,371 - ABZR87_RS20100 0.50 +0.3 886,371 - ABZR87_RS20100 0.50 +0.6 886,632 - ABZR87_RS20100 0.55 +0.3 886,652 + ABZR87_RS20100 0.55 +0.9 886,653 - ABZR87_RS20100 0.55 +0.4 886,653 - ABZR87_RS20100 0.55 -0.7 886,653 - ABZR87_RS20100 0.55 +0.6 886,703 + ABZR87_RS20100 0.56 -0.7 886,704 - ABZR87_RS20100 0.56 -0.3 886,808 + ABZR87_RS20100 0.58 +0.1 886,808 + ABZR87_RS20100 0.58 +0.9 886,809 - ABZR87_RS20100 0.58 +0.2 886,809 - ABZR87_RS20100 0.58 +1.0 886,959 - ABZR87_RS20100 0.60 +0.1 886,994 + ABZR87_RS20100 0.61 -0.6 886,996 + ABZR87_RS20100 0.61 -1.0 886,996 + ABZR87_RS20100 0.61 -1.2 886,996 + ABZR87_RS20100 0.61 -1.5 886,996 + ABZR87_RS20100 0.61 +0.1 886,997 - ABZR87_RS20100 0.61 -0.2 886,997 - ABZR87_RS20100 0.61 -1.6 886,997 - ABZR87_RS20100 0.61 -0.0 886,997 - ABZR87_RS20100 0.61 +0.9 886,997 - ABZR87_RS20100 0.61 -1.2 887,288 + ABZR87_RS20100 0.66 +0.7 887,288 + ABZR87_RS20100 0.66 +0.3 887,289 - ABZR87_RS20100 0.66 -1.0 887,289 - ABZR87_RS20100 0.66 -0.3 887,319 - ABZR87_RS20100 0.67 -0.3 887,319 - ABZR87_RS20100 0.67 +0.2 887,699 + ABZR87_RS20100 0.73 +0.7 887,700 - ABZR87_RS20100 0.73 +0.3 887,752 + ABZR87_RS20100 0.74 +0.9 887,753 - ABZR87_RS20100 0.74 +0.1 887,798 + ABZR87_RS20100 0.75 +2.1 887,799 - ABZR87_RS20100 0.75 +2.5 888,209 - ABZR87_RS20100 0.82 +0.1 888,209 - ABZR87_RS20100 0.82 +0.1 888,488 + ABZR87_RS20100 0.87 +0.1 888,488 + ABZR87_RS20100 0.87 +0.1 888,488 + ABZR87_RS20100 0.87 +0.7 888,488 + ABZR87_RS20100 0.87 -0.8 888,488 + ABZR87_RS20100 0.87 -0.2 888,489 - ABZR87_RS20100 0.87 +0.3 888,555 - ABZR87_RS20100 0.88 +0.7 888,965 + +0.4 888,965 + +0.7 888,965 + +0.7 888,965 + -0.1 888,965 + -2.2 888,965 + +1.4 888,966 - -2.2 888,966 - +1.6 888,966 - +0.3 888,966 - +0.1 888,966 - +0.4 889,495 + +1.1 889,495 + +0.1 889,495 + -0.1 889,495 + +0.9 889,495 + +0.6 889,495 + -0.1 889,495 + -1.7 889,495 + +0.7 889,495 + +0.1 889,495 + +0.0 889,495 + +1.1 889,496 - +2.0 889,496 - +0.2 889,496 - +0.2 889,496 - -1.0 889,496 - +0.8 889,496 - +0.7 889,496 - -0.6 889,496 - +0.5 889,496 - +0.9 889,554 + +1.0 889,554 + -0.6 889,555 - +0.2 889,555 - -0.2 889,555 - -0.5 889,555 - +0.1 889,555 - -0.2 889,783 + ABZR87_RS20105 0.15 -0.5 889,783 + ABZR87_RS20105 0.15 -0.2 889,784 - ABZR87_RS20105 0.16 +0.1 889,784 - ABZR87_RS20105 0.16 -0.4 889,784 - ABZR87_RS20105 0.16 -0.4 889,784 - ABZR87_RS20105 0.16 -0.3 889,784 - ABZR87_RS20105 0.16 +0.3 889,784 - ABZR87_RS20105 0.16 +0.1 889,784 - ABZR87_RS20105 0.16 +0.9 889,784 - ABZR87_RS20105 0.16 +0.1 889,820 + ABZR87_RS20105 0.17 +1.5 889,933 + ABZR87_RS20105 0.23 +0.6 889,933 + ABZR87_RS20105 0.23 -0.2 889,933 + ABZR87_RS20105 0.23 -0.2 889,934 - ABZR87_RS20105 0.23 -0.5 889,934 - ABZR87_RS20105 0.23 -0.4 889,934 - ABZR87_RS20105 0.23 +0.0
Or see this region's nucleotide sequence