Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16610 and ABZR87_RS16615 are separated by 306 nucleotides ABZR87_RS16615 and ABZR87_RS16620 are separated by 387 nucleotides ABZR87_RS16620 and ABZR87_RS16625 are separated by 38 nucleotides
ABZR87_RS16610: ABZR87_RS16610 - hypothetical protein, at 75,690 to 76,058
_RS16610
ABZR87_RS16615: ABZR87_RS16615 - response regulator transcription factor, at 76,365 to 77,102
_RS16615
ABZR87_RS16620: ABZR87_RS16620 - hypothetical protein, at 77,490 to 77,951
_RS16620
ABZR87_RS16625: ABZR87_RS16625 - methyl-accepting chemotaxis protein, at 77,990 to 79,609
_RS16625
Position (kb) 76
77
78 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 75.450 kb on + strand at 75.450 kb on + strand at 75.450 kb on + strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.452 kb on + strand at 75.452 kb on + strand at 75.453 kb on - strand at 75.453 kb on - strand at 75.453 kb on - strand at 75.555 kb on + strand at 75.555 kb on + strand at 75.556 kb on - strand at 75.556 kb on - strand at 75.556 kb on - strand at 75.591 kb on - strand at 75.617 kb on - strand at 75.617 kb on - strand at 75.617 kb on - strand at 75.695 kb on + strand at 75.696 kb on - strand at 75.696 kb on - strand at 75.723 kb on + strand at 75.723 kb on + strand at 75.801 kb on + strand, within ABZR87_RS16610 at 75.801 kb on + strand, within ABZR87_RS16610 at 75.801 kb on + strand, within ABZR87_RS16610 at 75.801 kb on + strand, within ABZR87_RS16610 at 75.816 kb on - strand, within ABZR87_RS16610 at 75.831 kb on + strand, within ABZR87_RS16610 at 75.832 kb on - strand, within ABZR87_RS16610 at 75.832 kb on - strand, within ABZR87_RS16610 at 75.969 kb on + strand, within ABZR87_RS16610 at 75.970 kb on - strand, within ABZR87_RS16610 at 75.970 kb on - strand, within ABZR87_RS16610 at 75.970 kb on - strand, within ABZR87_RS16610 at 76.048 kb on - strand at 76.252 kb on + strand at 76.252 kb on + strand at 76.252 kb on + strand at 76.366 kb on + strand at 76.367 kb on - strand at 76.447 kb on + strand, within ABZR87_RS16615 at 76.447 kb on + strand, within ABZR87_RS16615 at 76.447 kb on + strand, within ABZR87_RS16615 at 76.447 kb on + strand, within ABZR87_RS16615 at 76.447 kb on + strand, within ABZR87_RS16615 at 76.448 kb on - strand, within ABZR87_RS16615 at 76.448 kb on - strand, within ABZR87_RS16615 at 76.507 kb on + strand, within ABZR87_RS16615 at 76.507 kb on + strand, within ABZR87_RS16615 at 76.507 kb on + strand, within ABZR87_RS16615 at 76.507 kb on + strand, within ABZR87_RS16615 at 76.507 kb on + strand, within ABZR87_RS16615 at 76.507 kb on + strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.508 kb on - strand, within ABZR87_RS16615 at 76.696 kb on + strand, within ABZR87_RS16615 at 76.934 kb on + strand, within ABZR87_RS16615 at 77.059 kb on + strand at 77.059 kb on + strand at 77.059 kb on + strand at 77.060 kb on - strand at 77.060 kb on - strand at 77.060 kb on - strand at 77.060 kb on - strand at 77.060 kb on - strand at 77.089 kb on - strand at 77.173 kb on - strand at 77.199 kb on + strand at 77.201 kb on - strand at 77.201 kb on - strand at 77.201 kb on - strand at 77.203 kb on - strand at 77.203 kb on - strand at 77.203 kb on - strand at 77.221 kb on + strand at 77.291 kb on + strand at 77.342 kb on + strand at 77.342 kb on + strand at 77.342 kb on + strand at 77.342 kb on + strand at 77.343 kb on - strand at 77.343 kb on - strand at 77.343 kb on - strand at 77.343 kb on - strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.427 kb on + strand at 77.428 kb on - strand at 77.428 kb on - strand at 77.428 kb on - strand at 77.428 kb on - strand at 77.428 kb on - strand at 77.428 kb on - strand at 77.428 kb on - strand at 77.525 kb on + strand at 77.559 kb on - strand, within ABZR87_RS16620 at 77.675 kb on + strand, within ABZR87_RS16620 at 77.675 kb on + strand, within ABZR87_RS16620 at 77.676 kb on - strand, within ABZR87_RS16620 at 77.912 kb on + strand at 77.918 kb on + strand at 77.919 kb on - strand at 77.919 kb on - strand at 77.926 kb on + strand at 77.926 kb on + strand at 77.927 kb on - strand at 77.927 kb on - strand at 77.927 kb on - strand at 77.927 kb on - strand at 78.004 kb on + strand at 78.005 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 75,450 + -1.4 75,450 + -0.2 75,450 + -0.6 75,451 - +0.3 75,451 - +0.6 75,451 - -0.6 75,451 - +0.8 75,451 - -0.2 75,452 + -1.6 75,452 + +0.6 75,453 - +1.4 75,453 - +0.1 75,453 - +0.1 75,555 + +0.5 75,555 + +0.7 75,556 - +0.4 75,556 - -0.1 75,556 - +1.3 75,591 - +0.3 75,617 - -0.6 75,617 - -1.1 75,617 - -0.6 75,695 + -0.3 75,696 - -0.0 75,696 - -0.8 75,723 + -0.8 75,723 + +0.5 75,801 + ABZR87_RS16610 0.30 -0.1 75,801 + ABZR87_RS16610 0.30 -0.3 75,801 + ABZR87_RS16610 0.30 +0.6 75,801 + ABZR87_RS16610 0.30 +0.9 75,816 - ABZR87_RS16610 0.34 -0.4 75,831 + ABZR87_RS16610 0.38 +0.6 75,832 - ABZR87_RS16610 0.38 +0.2 75,832 - ABZR87_RS16610 0.38 -0.1 75,969 + ABZR87_RS16610 0.76 +0.3 75,970 - ABZR87_RS16610 0.76 +0.4 75,970 - ABZR87_RS16610 0.76 +1.9 75,970 - ABZR87_RS16610 0.76 -0.5 76,048 - +0.3 76,252 + +0.3 76,252 + +0.3 76,252 + +0.8 76,366 + +0.1 76,367 - -1.8 76,447 + ABZR87_RS16615 0.11 -0.6 76,447 + ABZR87_RS16615 0.11 -0.1 76,447 + ABZR87_RS16615 0.11 -0.6 76,447 + ABZR87_RS16615 0.11 -1.0 76,447 + ABZR87_RS16615 0.11 +0.1 76,448 - ABZR87_RS16615 0.11 +0.1 76,448 - ABZR87_RS16615 0.11 +0.4 76,507 + ABZR87_RS16615 0.19 +0.7 76,507 + ABZR87_RS16615 0.19 +0.1 76,507 + ABZR87_RS16615 0.19 -0.9 76,507 + ABZR87_RS16615 0.19 +0.1 76,507 + ABZR87_RS16615 0.19 -0.1 76,507 + ABZR87_RS16615 0.19 +0.8 76,508 - ABZR87_RS16615 0.19 -0.0 76,508 - ABZR87_RS16615 0.19 -0.7 76,508 - ABZR87_RS16615 0.19 +0.4 76,508 - ABZR87_RS16615 0.19 -1.1 76,508 - ABZR87_RS16615 0.19 -0.3 76,508 - ABZR87_RS16615 0.19 -0.7 76,508 - ABZR87_RS16615 0.19 -0.4 76,508 - ABZR87_RS16615 0.19 -0.1 76,696 + ABZR87_RS16615 0.45 -1.6 76,934 + ABZR87_RS16615 0.77 -1.3 77,059 + -0.3 77,059 + -0.2 77,059 + -0.4 77,060 - +0.4 77,060 - -0.5 77,060 - -0.6 77,060 - -1.4 77,060 - +0.2 77,089 - -0.4 77,173 - +1.0 77,199 + +1.3 77,201 - -1.1 77,201 - +2.0 77,201 - -0.4 77,203 - +0.4 77,203 - +0.7 77,203 - -0.4 77,221 + -0.0 77,291 + -1.9 77,342 + -0.4 77,342 + +0.6 77,342 + +0.6 77,342 + +0.9 77,343 - +0.6 77,343 - +0.6 77,343 - +0.5 77,343 - +0.7 77,427 + +0.3 77,427 + +0.9 77,427 + -0.0 77,427 + -0.5 77,427 + -1.1 77,427 + -1.1 77,427 + +1.2 77,427 + -3.1 77,427 + -0.1 77,427 + -1.0 77,427 + +0.2 77,427 + -0.1 77,428 - +0.1 77,428 - +0.1 77,428 - -2.1 77,428 - +0.0 77,428 - +1.5 77,428 - +0.4 77,428 - +1.0 77,525 + +1.9 77,559 - ABZR87_RS16620 0.15 +0.3 77,675 + ABZR87_RS16620 0.40 -0.9 77,675 + ABZR87_RS16620 0.40 -0.8 77,676 - ABZR87_RS16620 0.40 -0.3 77,912 + +0.4 77,918 + +0.3 77,919 - -1.5 77,919 - -1.7 77,926 + +0.7 77,926 + -0.9 77,927 - +0.4 77,927 - +0.9 77,927 - +0.6 77,927 - +0.3 78,004 + +0.4 78,005 - -0.7
Or see this region's nucleotide sequence