Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15650

Experiment: Dodecandioic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dodecandioic (C)
3,300,042	-		ABZR87_RS15645	0.38	-1.5
3,300,042	-		ABZR87_RS15645	0.38	-1.4
3,300,153	-		ABZR87_RS15645	0.77	-1.5
3,300,153	-		ABZR87_RS15645	0.77	-0.9
3,300,166	-		ABZR87_RS15645	0.81	-0.6
3,300,166	-		ABZR87_RS15645	0.81	-0.2
3,300,256	+				+0.6
3,300,387	+				+0.2
3,300,388	-				+0.4
3,300,388	-				-0.2
3,300,388	-				-0.9
3,300,404	+				-0.1
3,300,404	+				-2.9
3,300,404	+				-2.1
3,300,404	+				+0.6
3,300,405	-				+0.2
3,300,405	-				-0.6
3,300,486	+				-0.2
3,300,486	+				+0.3
3,300,486	+				-0.9
3,300,486	+				+1.1
3,300,487	-				-1.8
3,300,487	-				-1.4
3,300,487	-				-1.6
3,300,487	-				+1.4
3,300,487	-				-0.7
3,300,544	+				-1.6
3,300,545	-				-2.2
3,300,698	-				-0.8
3,300,716	-				-1.5
3,300,716	-				-0.2
3,300,716	-				-1.5
3,300,757	+		ABZR87_RS15650	0.11	-1.2
3,300,757	+		ABZR87_RS15650	0.11	+0.2
3,300,796	+		ABZR87_RS15650	0.15	-1.5
3,300,796	+		ABZR87_RS15650	0.15	-1.1
3,300,797	-		ABZR87_RS15650	0.15	-1.8
3,300,797	-		ABZR87_RS15650	0.15	-1.9
3,300,952	+		ABZR87_RS15650	0.29	+0.8
3,300,953	-		ABZR87_RS15650	0.29	+0.4
3,301,070	+		ABZR87_RS15650	0.40	+1.2
3,301,124	-		ABZR87_RS15650	0.45	-1.6
3,301,124	-		ABZR87_RS15650	0.45	-1.5
3,301,159	+		ABZR87_RS15650	0.48	-0.7
3,301,159	+		ABZR87_RS15650	0.48	+0.5
3,301,159	+		ABZR87_RS15650	0.48	-2.0
3,301,160	-		ABZR87_RS15650	0.48	-0.5
3,301,186	+		ABZR87_RS15650	0.50	-1.1
3,301,186	+		ABZR87_RS15650	0.50	-1.7
3,301,187	-		ABZR87_RS15650	0.50	-2.4
3,301,187	-		ABZR87_RS15650	0.50	-0.2
3,301,187	-		ABZR87_RS15650	0.50	-3.2
3,301,198	+		ABZR87_RS15650	0.51	-1.5
3,301,199	-		ABZR87_RS15650	0.51	-1.1
3,301,333	+		ABZR87_RS15650	0.64	-1.4
3,301,334	-		ABZR87_RS15650	0.64	-0.4
3,301,387	+		ABZR87_RS15650	0.69	-1.7
3,301,388	-		ABZR87_RS15650	0.69	-0.2
3,301,408	+		ABZR87_RS15650	0.70	-0.4
3,301,408	+		ABZR87_RS15650	0.70	-1.0
3,301,408	+		ABZR87_RS15650	0.70	-1.6
3,301,408	+		ABZR87_RS15650	0.70	-1.3
3,301,408	+		ABZR87_RS15650	0.70	-0.8
3,301,408	+		ABZR87_RS15650	0.70	-1.9
3,301,409	-		ABZR87_RS15650	0.71	-2.8
3,301,409	-		ABZR87_RS15650	0.71	-1.3
3,301,409	-		ABZR87_RS15650	0.71	-3.8
3,301,409	-		ABZR87_RS15650	0.71	-2.3
3,301,496	+		ABZR87_RS15650	0.79	-0.9
3,301,496	+		ABZR87_RS15650	0.79	-0.5
3,301,497	-		ABZR87_RS15650	0.79	-3.0
3,301,507	+		ABZR87_RS15650	0.80	-0.6
3,301,507	+		ABZR87_RS15650	0.80	-2.5
3,301,507	+		ABZR87_RS15650	0.80	-0.6
3,301,508	-		ABZR87_RS15650	0.80	-1.5
3,301,567	+		ABZR87_RS15650	0.85	-1.5
3,301,567	+		ABZR87_RS15650	0.85	-1.4
3,301,567	+		ABZR87_RS15650	0.85	-2.7
3,301,568	-		ABZR87_RS15650	0.85	-1.7
3,301,568	-		ABZR87_RS15650	0.85	-2.8
3,301,568	-		ABZR87_RS15650	0.85	-0.9
3,301,568	-		ABZR87_RS15650	0.85	-0.6
3,301,568	-		ABZR87_RS15650	0.85	-0.6
3,301,569	+		ABZR87_RS15650	0.85	-2.5
3,301,570	-		ABZR87_RS15650	0.85	+2.4
3,301,709	-				-1.5
3,301,709	-				+0.1
3,301,709	-				-2.1
3,301,726	+				+0.2
3,301,727	-				-1.2
3,301,727	-				+1.4
3,301,729	+				-2.0
3,301,729	+				-1.4
3,301,729	+				+0.4
3,301,729	+				-0.4
3,301,729	+				+0.4
3,301,729	+				+0.1
3,301,729	+				+0.1
3,301,729	+				+0.5
3,301,729	+				-0.4
3,301,729	+				-0.5
3,301,729	+				-0.4
3,301,730	-				-0.2
3,301,730	-				+0.8
3,301,730	-				+0.1
3,301,730	-				-1.1
3,301,730	-				-0.6
3,301,746	+				-0.1
3,301,774	+				-0.9
3,301,775	-				-0.9
3,301,775	-				+0.7
3,301,775	-				+1.4
3,301,775	-				+1.3
3,301,775	-				-0.4
3,301,968	+		ABZR87_RS15655	0.14	-0.9
3,301,969	-		ABZR87_RS15655	0.14	+0.2
3,301,969	-		ABZR87_RS15655	0.14	+2.1
3,301,971	+		ABZR87_RS15655	0.14	-0.3
3,301,971	+		ABZR87_RS15655	0.14	-0.9
3,301,971	+		ABZR87_RS15655	0.14	+1.3
3,301,972	-		ABZR87_RS15655	0.14	-0.3
3,301,972	-		ABZR87_RS15655	0.14	-0.0
3,301,972	-		ABZR87_RS15655	0.14	-0.7
3,301,972	-		ABZR87_RS15655	0.14	+0.7
3,301,995	+		ABZR87_RS15655	0.16	+1.5
3,301,996	-		ABZR87_RS15655	0.16	+0.2
3,302,068	-		ABZR87_RS15655	0.24	+0.6
3,302,068	-		ABZR87_RS15655	0.24	-1.1
3,302,172	+		ABZR87_RS15655	0.34	-1.1
3,302,172	+		ABZR87_RS15655	0.34	+0.3
3,302,172	+		ABZR87_RS15655	0.34	-0.4
3,302,172	+		ABZR87_RS15655	0.34	+0.6
3,302,173	-		ABZR87_RS15655	0.34	+0.5
3,302,173	-		ABZR87_RS15655	0.34	-2.2
3,302,173	-		ABZR87_RS15655	0.34	+2.4
3,302,382	+		ABZR87_RS15655	0.55	+1.1
3,302,382	+		ABZR87_RS15655	0.55	-2.0
3,302,382	+		ABZR87_RS15655	0.55	+1.0
3,302,382	+		ABZR87_RS15655	0.55	+0.8
3,302,383	-		ABZR87_RS15655	0.56	+0.2
3,302,383	-		ABZR87_RS15655	0.56	+0.2
3,302,383	-		ABZR87_RS15655	0.56	+1.3
3,302,383	-		ABZR87_RS15655	0.56	+0.2
3,302,504	+		ABZR87_RS15655	0.68	+0.3
3,302,504	+		ABZR87_RS15655	0.68	+0.8
3,302,504	+		ABZR87_RS15655	0.68	+0.7
3,302,505	-		ABZR87_RS15655	0.68	+1.3
3,302,505	-		ABZR87_RS15655	0.68	-1.4
3,302,505	-		ABZR87_RS15655	0.68	+1.4
3,302,505	-		ABZR87_RS15655	0.68	+1.2
3,302,505	-		ABZR87_RS15655	0.68	-0.2
3,302,514	-		ABZR87_RS15655	0.69	+1.4
3,302,514	-		ABZR87_RS15655	0.69	+0.1
3,302,580	+		ABZR87_RS15655	0.75	-1.1
3,302,580	+		ABZR87_RS15655	0.75	-0.2
3,302,580	+		ABZR87_RS15655	0.75	+0.4
3,302,581	-		ABZR87_RS15655	0.76	+0.6
3,302,581	-		ABZR87_RS15655	0.76	+0.9
3,302,582	+		ABZR87_RS15655	0.76	+0.5
3,302,583	-		ABZR87_RS15655	0.76	-0.2
3,302,583	-		ABZR87_RS15655	0.76	-0.5
3,302,619	+		ABZR87_RS15655	0.79	-0.6
3,302,619	+		ABZR87_RS15655	0.79	-0.3
3,302,620	-		ABZR87_RS15655	0.79	+1.0
3,302,620	-		ABZR87_RS15655	0.79	+0.8
3,302,620	-		ABZR87_RS15655	0.79	-0.2
3,302,620	-		ABZR87_RS15655	0.79	+0.3
3,302,652	-		ABZR87_RS15655	0.83	+0.5
3,302,652	-		ABZR87_RS15655	0.83	+0.1
3,302,652	-		ABZR87_RS15655	0.83	+0.3