Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS15365 and ABZR87_RS15370 are separated by 9 nucleotides ABZR87_RS15370 and ABZR87_RS15375 overlap by 4 nucleotides ABZR87_RS15375 and ABZR87_RS15380 are separated by 10 nucleotides ABZR87_RS15380 and ABZR87_RS15385 are separated by 50 nucleotides
ABZR87_RS15365: ABZR87_RS15365 - YkvA family protein, at 3,234,852 to 3,235,148
_RS15365
ABZR87_RS15370: ABZR87_RS15370 - quinone oxidoreductase, at 3,235,158 to 3,236,138
_RS15370
ABZR87_RS15375: ABZR87_RS15375 - methylglyoxal synthase, at 3,236,135 to 3,236,575
_RS15375
ABZR87_RS15380: ABZR87_RS15380 - SDR family oxidoreductase, at 3,236,586 to 3,237,377
_RS15380
ABZR87_RS15385: ABZR87_RS15385 - DMT family transporter, at 3,237,428 to 3,238,345
_RS15385
Position (kb) 3236
3237 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3235.159 kb on + strand at 3235.160 kb on - strand at 3235.330 kb on + strand, within ABZR87_RS15370 at 3235.330 kb on + strand, within ABZR87_RS15370 at 3235.330 kb on + strand, within ABZR87_RS15370 at 3235.330 kb on + strand, within ABZR87_RS15370 at 3235.330 kb on + strand, within ABZR87_RS15370 at 3235.331 kb on - strand, within ABZR87_RS15370 at 3235.331 kb on - strand, within ABZR87_RS15370 at 3235.423 kb on + strand, within ABZR87_RS15370 at 3235.423 kb on + strand, within ABZR87_RS15370 at 3235.424 kb on - strand, within ABZR87_RS15370 at 3235.424 kb on - strand, within ABZR87_RS15370 at 3235.424 kb on - strand, within ABZR87_RS15370 at 3235.424 kb on - strand, within ABZR87_RS15370 at 3235.424 kb on - strand, within ABZR87_RS15370 at 3235.495 kb on + strand, within ABZR87_RS15370 at 3235.495 kb on + strand, within ABZR87_RS15370 at 3235.495 kb on + strand, within ABZR87_RS15370 at 3235.496 kb on - strand, within ABZR87_RS15370 at 3235.562 kb on - strand, within ABZR87_RS15370 at 3235.710 kb on - strand, within ABZR87_RS15370 at 3235.747 kb on + strand, within ABZR87_RS15370 at 3235.815 kb on + strand, within ABZR87_RS15370 at 3235.876 kb on + strand, within ABZR87_RS15370 at 3235.876 kb on + strand, within ABZR87_RS15370 at 3235.877 kb on - strand, within ABZR87_RS15370 at 3235.979 kb on - strand, within ABZR87_RS15370 at 3235.979 kb on - strand, within ABZR87_RS15370 at 3235.996 kb on + strand, within ABZR87_RS15370 at 3236.008 kb on + strand, within ABZR87_RS15370 at 3236.008 kb on + strand, within ABZR87_RS15370 at 3236.008 kb on + strand, within ABZR87_RS15370 at 3236.009 kb on - strand, within ABZR87_RS15370 at 3236.009 kb on - strand, within ABZR87_RS15370 at 3236.009 kb on - strand, within ABZR87_RS15370 at 3236.080 kb on + strand at 3236.080 kb on + strand at 3236.080 kb on + strand at 3236.081 kb on - strand at 3236.081 kb on - strand at 3236.554 kb on + strand at 3236.569 kb on + strand at 3236.569 kb on + strand at 3236.569 kb on + strand at 3236.570 kb on - strand at 3236.570 kb on - strand at 3236.588 kb on - strand at 3236.737 kb on - strand, within ABZR87_RS15380 at 3237.400 kb on + strand at 3237.401 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 3,235,159 + +1.2 3,235,160 - +1.7 3,235,330 + ABZR87_RS15370 0.18 +0.5 3,235,330 + ABZR87_RS15370 0.18 +0.0 3,235,330 + ABZR87_RS15370 0.18 +0.8 3,235,330 + ABZR87_RS15370 0.18 -0.8 3,235,330 + ABZR87_RS15370 0.18 -0.3 3,235,331 - ABZR87_RS15370 0.18 -0.8 3,235,331 - ABZR87_RS15370 0.18 +0.4 3,235,423 + ABZR87_RS15370 0.27 +0.5 3,235,423 + ABZR87_RS15370 0.27 -1.5 3,235,424 - ABZR87_RS15370 0.27 -1.3 3,235,424 - ABZR87_RS15370 0.27 -0.5 3,235,424 - ABZR87_RS15370 0.27 -0.9 3,235,424 - ABZR87_RS15370 0.27 +1.3 3,235,424 - ABZR87_RS15370 0.27 -0.0 3,235,495 + ABZR87_RS15370 0.34 -1.7 3,235,495 + ABZR87_RS15370 0.34 -0.2 3,235,495 + ABZR87_RS15370 0.34 +0.2 3,235,496 - ABZR87_RS15370 0.34 +0.2 3,235,562 - ABZR87_RS15370 0.41 +0.3 3,235,710 - ABZR87_RS15370 0.56 +1.1 3,235,747 + ABZR87_RS15370 0.60 -0.2 3,235,815 + ABZR87_RS15370 0.67 +0.6 3,235,876 + ABZR87_RS15370 0.73 -0.5 3,235,876 + ABZR87_RS15370 0.73 +1.0 3,235,877 - ABZR87_RS15370 0.73 +0.4 3,235,979 - ABZR87_RS15370 0.84 +0.8 3,235,979 - ABZR87_RS15370 0.84 -0.0 3,235,996 + ABZR87_RS15370 0.85 -1.0 3,236,008 + ABZR87_RS15370 0.87 -0.5 3,236,008 + ABZR87_RS15370 0.87 -0.3 3,236,008 + ABZR87_RS15370 0.87 +0.4 3,236,009 - ABZR87_RS15370 0.87 -0.2 3,236,009 - ABZR87_RS15370 0.87 -0.4 3,236,009 - ABZR87_RS15370 0.87 +0.8 3,236,080 + -0.6 3,236,080 + -0.2 3,236,080 + +0.5 3,236,081 - -0.3 3,236,081 - -0.1 3,236,554 + -2.8 3,236,569 + -1.3 3,236,569 + +1.7 3,236,569 + -1.6 3,236,570 - +0.9 3,236,570 - +0.7 3,236,588 - +0.7 3,236,737 - ABZR87_RS15380 0.19 +1.0 3,237,400 + +0.7 3,237,401 - -0.1
Or see this region's nucleotide sequence