Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS12120 and ABZR87_RS12125 are separated by 23 nucleotides ABZR87_RS12125 and ABZR87_RS12130 are separated by 9 nucleotides ABZR87_RS12130 and ABZR87_RS12135 are separated by 148 nucleotides
ABZR87_RS12120: ABZR87_RS12120 - isocitrate lyase/phosphoenolpyruvate mutase family protein, at 2,571,484 to 2,572,311
_RS12120
ABZR87_RS12125: ABZR87_RS12125 - DsbA family protein, at 2,572,335 to 2,572,505
_RS12125
ABZR87_RS12130: ABZR87_RS12130 - LysR substrate-binding domain-containing protein, at 2,572,515 to 2,573,432
_RS12130
ABZR87_RS12135: ABZR87_RS12135 - MFS transporter, at 2,573,581 to 2,574,798
_RS12135
Position (kb)
2572
2573
2574 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2571.938 kb on + strand, within ABZR87_RS12120 at 2572.137 kb on - strand, within ABZR87_RS12120 at 2572.606 kb on + strand at 2572.606 kb on + strand at 2572.606 kb on + strand at 2572.607 kb on - strand, within ABZR87_RS12130 at 2572.607 kb on - strand, within ABZR87_RS12130 at 2572.985 kb on - strand, within ABZR87_RS12130 at 2573.496 kb on + strand at 2573.840 kb on - strand, within ABZR87_RS12135 at 2573.950 kb on + strand, within ABZR87_RS12135 at 2573.950 kb on + strand, within ABZR87_RS12135 at 2573.951 kb on - strand, within ABZR87_RS12135 at 2573.951 kb on - strand, within ABZR87_RS12135 at 2573.951 kb on - strand, within ABZR87_RS12135 at 2573.951 kb on - strand, within ABZR87_RS12135 at 2574.302 kb on - strand, within ABZR87_RS12135 at 2574.382 kb on + strand, within ABZR87_RS12135 at 2574.382 kb on + strand, within ABZR87_RS12135 at 2574.382 kb on + strand, within ABZR87_RS12135 at 2574.383 kb on - strand, within ABZR87_RS12135 at 2574.383 kb on - strand, within ABZR87_RS12135 at 2574.383 kb on - strand, within ABZR87_RS12135 at 2574.383 kb on - strand, within ABZR87_RS12135 at 2574.421 kb on + strand, within ABZR87_RS12135 at 2574.421 kb on + strand, within ABZR87_RS12135 at 2574.421 kb on + strand, within ABZR87_RS12135 at 2574.421 kb on + strand, within ABZR87_RS12135 at 2574.421 kb on + strand, within ABZR87_RS12135 at 2574.422 kb on - strand, within ABZR87_RS12135 at 2574.422 kb on - strand, within ABZR87_RS12135 at 2574.422 kb on - strand, within ABZR87_RS12135 at 2574.422 kb on - strand, within ABZR87_RS12135
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 2,571,938 + ABZR87_RS12120 0.55 +0.7 2,572,137 - ABZR87_RS12120 0.79 -0.5 2,572,606 + +0.5 2,572,606 + -1.3 2,572,606 + +0.1 2,572,607 - ABZR87_RS12130 0.10 +1.2 2,572,607 - ABZR87_RS12130 0.10 +1.5 2,572,985 - ABZR87_RS12130 0.51 -0.9 2,573,496 + -0.3 2,573,840 - ABZR87_RS12135 0.21 -0.2 2,573,950 + ABZR87_RS12135 0.30 +1.7 2,573,950 + ABZR87_RS12135 0.30 -0.0 2,573,951 - ABZR87_RS12135 0.30 -0.7 2,573,951 - ABZR87_RS12135 0.30 -0.1 2,573,951 - ABZR87_RS12135 0.30 -0.2 2,573,951 - ABZR87_RS12135 0.30 -0.8 2,574,302 - ABZR87_RS12135 0.59 -0.1 2,574,382 + ABZR87_RS12135 0.66 -3.1 2,574,382 + ABZR87_RS12135 0.66 +0.7 2,574,382 + ABZR87_RS12135 0.66 +0.5 2,574,383 - ABZR87_RS12135 0.66 -1.5 2,574,383 - ABZR87_RS12135 0.66 -0.5 2,574,383 - ABZR87_RS12135 0.66 -0.7 2,574,383 - ABZR87_RS12135 0.66 -0.9 2,574,421 + ABZR87_RS12135 0.69 -1.2 2,574,421 + ABZR87_RS12135 0.69 -0.3 2,574,421 + ABZR87_RS12135 0.69 +0.8 2,574,421 + ABZR87_RS12135 0.69 +0.0 2,574,421 + ABZR87_RS12135 0.69 +0.4 2,574,422 - ABZR87_RS12135 0.69 +0.2 2,574,422 - ABZR87_RS12135 0.69 +0.6 2,574,422 - ABZR87_RS12135 0.69 +0.4 2,574,422 - ABZR87_RS12135 0.69 -0.2
Or see this region's nucleotide sequence