Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11775 and ABZR87_RS11780 are separated by 37 nucleotides ABZR87_RS11780 and ABZR87_RS11785 are separated by 251 nucleotides
ABZR87_RS11775: ABZR87_RS11775 - DMT family transporter, at 2,494,915 to 2,495,835
_RS11775
ABZR87_RS11780: ABZR87_RS11780 - alpha/beta hydrolase, at 2,495,873 to 2,496,919
_RS11780
ABZR87_RS11785: ABZR87_RS11785 - chromosome segregation protein SMC, at 2,497,171 to 2,500,686
_RS11785
Position (kb)
2495
2496
2497 Strain fitness (log2 ratio)
-1
0
1
2 at 2494.926 kb on - strand at 2494.926 kb on - strand at 2494.988 kb on + strand at 2494.988 kb on + strand at 2494.989 kb on - strand at 2495.027 kb on - strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.598 kb on + strand, within ABZR87_RS11775 at 2495.598 kb on + strand, within ABZR87_RS11775 at 2495.598 kb on + strand, within ABZR87_RS11775 at 2495.599 kb on - strand, within ABZR87_RS11775 at 2495.599 kb on - strand, within ABZR87_RS11775 at 2495.599 kb on - strand, within ABZR87_RS11775 at 2495.833 kb on + strand at 2495.834 kb on - strand at 2495.834 kb on - strand at 2495.834 kb on - strand at 2495.834 kb on - strand at 2495.966 kb on + strand at 2495.966 kb on + strand at 2495.967 kb on - strand at 2496.053 kb on + strand, within ABZR87_RS11780 at 2496.054 kb on - strand, within ABZR87_RS11780 at 2496.054 kb on - strand, within ABZR87_RS11780 at 2496.224 kb on + strand, within ABZR87_RS11780 at 2496.224 kb on + strand, within ABZR87_RS11780 at 2496.224 kb on + strand, within ABZR87_RS11780 at 2496.224 kb on + strand, within ABZR87_RS11780 at 2496.225 kb on - strand, within ABZR87_RS11780 at 2496.225 kb on - strand, within ABZR87_RS11780 at 2496.225 kb on - strand, within ABZR87_RS11780 at 2496.225 kb on - strand, within ABZR87_RS11780 at 2496.230 kb on + strand, within ABZR87_RS11780 at 2496.230 kb on + strand, within ABZR87_RS11780 at 2496.230 kb on + strand, within ABZR87_RS11780 at 2496.230 kb on + strand, within ABZR87_RS11780 at 2496.230 kb on + strand, within ABZR87_RS11780 at 2496.231 kb on - strand, within ABZR87_RS11780 at 2496.231 kb on - strand, within ABZR87_RS11780 at 2496.231 kb on - strand, within ABZR87_RS11780 at 2496.231 kb on - strand, within ABZR87_RS11780 at 2496.256 kb on + strand, within ABZR87_RS11780 at 2496.256 kb on + strand, within ABZR87_RS11780 at 2496.257 kb on - strand, within ABZR87_RS11780 at 2496.257 kb on - strand, within ABZR87_RS11780 at 2496.257 kb on - strand, within ABZR87_RS11780 at 2496.350 kb on + strand, within ABZR87_RS11780 at 2496.351 kb on - strand, within ABZR87_RS11780 at 2496.488 kb on + strand, within ABZR87_RS11780 at 2496.503 kb on + strand, within ABZR87_RS11780 at 2496.503 kb on + strand, within ABZR87_RS11780 at 2496.503 kb on + strand, within ABZR87_RS11780 at 2496.503 kb on + strand, within ABZR87_RS11780 at 2496.503 kb on + strand, within ABZR87_RS11780 at 2496.504 kb on - strand, within ABZR87_RS11780 at 2496.504 kb on - strand, within ABZR87_RS11780 at 2496.504 kb on - strand, within ABZR87_RS11780 at 2496.506 kb on + strand, within ABZR87_RS11780 at 2496.507 kb on - strand, within ABZR87_RS11780 at 2496.507 kb on - strand, within ABZR87_RS11780 at 2496.507 kb on - strand, within ABZR87_RS11780 at 2496.507 kb on - strand, within ABZR87_RS11780 at 2496.530 kb on + strand, within ABZR87_RS11780 at 2496.531 kb on - strand, within ABZR87_RS11780 at 2496.564 kb on - strand, within ABZR87_RS11780 at 2496.564 kb on - strand, within ABZR87_RS11780 at 2496.564 kb on - strand, within ABZR87_RS11780 at 2496.564 kb on - strand, within ABZR87_RS11780 at 2496.611 kb on + strand, within ABZR87_RS11780 at 2496.623 kb on + strand, within ABZR87_RS11780 at 2496.623 kb on + strand, within ABZR87_RS11780 at 2496.623 kb on + strand, within ABZR87_RS11780 at 2496.623 kb on + strand, within ABZR87_RS11780 at 2496.624 kb on - strand, within ABZR87_RS11780 at 2496.624 kb on - strand, within ABZR87_RS11780 at 2496.624 kb on - strand, within ABZR87_RS11780 at 2496.641 kb on + strand, within ABZR87_RS11780 at 2496.642 kb on - strand, within ABZR87_RS11780 at 2496.642 kb on - strand, within ABZR87_RS11780 at 2497.037 kb on + strand at 2497.037 kb on + strand at 2497.037 kb on + strand at 2497.134 kb on + strand at 2497.134 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 2,494,926 - -0.6 2,494,926 - +0.7 2,494,988 + +0.1 2,494,988 + -0.7 2,494,989 - -1.0 2,495,027 - ABZR87_RS11775 0.12 -1.3 2,495,245 + ABZR87_RS11775 0.36 +0.6 2,495,245 + ABZR87_RS11775 0.36 +1.7 2,495,245 + ABZR87_RS11775 0.36 -0.9 2,495,245 + ABZR87_RS11775 0.36 -1.0 2,495,246 - ABZR87_RS11775 0.36 +0.8 2,495,246 - ABZR87_RS11775 0.36 -0.3 2,495,246 - ABZR87_RS11775 0.36 +1.8 2,495,246 - ABZR87_RS11775 0.36 -0.4 2,495,598 + ABZR87_RS11775 0.74 -0.9 2,495,598 + ABZR87_RS11775 0.74 +0.5 2,495,598 + ABZR87_RS11775 0.74 +0.7 2,495,599 - ABZR87_RS11775 0.74 -1.1 2,495,599 - ABZR87_RS11775 0.74 -1.6 2,495,599 - ABZR87_RS11775 0.74 +0.4 2,495,833 + +0.9 2,495,834 - +0.1 2,495,834 - -0.5 2,495,834 - +0.7 2,495,834 - +0.0 2,495,966 + +0.1 2,495,966 + -0.1 2,495,967 - -0.0 2,496,053 + ABZR87_RS11780 0.17 +0.7 2,496,054 - ABZR87_RS11780 0.17 +0.6 2,496,054 - ABZR87_RS11780 0.17 +0.2 2,496,224 + ABZR87_RS11780 0.34 -1.7 2,496,224 + ABZR87_RS11780 0.34 +1.0 2,496,224 + ABZR87_RS11780 0.34 -0.2 2,496,224 + ABZR87_RS11780 0.34 +0.7 2,496,225 - ABZR87_RS11780 0.34 +0.0 2,496,225 - ABZR87_RS11780 0.34 +0.5 2,496,225 - ABZR87_RS11780 0.34 -0.6 2,496,225 - ABZR87_RS11780 0.34 +0.2 2,496,230 + ABZR87_RS11780 0.34 -0.1 2,496,230 + ABZR87_RS11780 0.34 +0.5 2,496,230 + ABZR87_RS11780 0.34 +0.2 2,496,230 + ABZR87_RS11780 0.34 +0.4 2,496,230 + ABZR87_RS11780 0.34 +1.7 2,496,231 - ABZR87_RS11780 0.34 -0.2 2,496,231 - ABZR87_RS11780 0.34 -0.0 2,496,231 - ABZR87_RS11780 0.34 +0.9 2,496,231 - ABZR87_RS11780 0.34 +0.4 2,496,256 + ABZR87_RS11780 0.37 +1.0 2,496,256 + ABZR87_RS11780 0.37 +0.1 2,496,257 - ABZR87_RS11780 0.37 +0.8 2,496,257 - ABZR87_RS11780 0.37 +0.7 2,496,257 - ABZR87_RS11780 0.37 +0.5 2,496,350 + ABZR87_RS11780 0.46 +0.5 2,496,351 - ABZR87_RS11780 0.46 +1.1 2,496,488 + ABZR87_RS11780 0.59 +0.9 2,496,503 + ABZR87_RS11780 0.60 +1.4 2,496,503 + ABZR87_RS11780 0.60 -1.1 2,496,503 + ABZR87_RS11780 0.60 -0.1 2,496,503 + ABZR87_RS11780 0.60 +0.1 2,496,503 + ABZR87_RS11780 0.60 +0.3 2,496,504 - ABZR87_RS11780 0.60 -0.6 2,496,504 - ABZR87_RS11780 0.60 +1.5 2,496,504 - ABZR87_RS11780 0.60 -0.2 2,496,506 + ABZR87_RS11780 0.60 +0.9 2,496,507 - ABZR87_RS11780 0.61 -0.8 2,496,507 - ABZR87_RS11780 0.61 +0.6 2,496,507 - ABZR87_RS11780 0.61 -0.6 2,496,507 - ABZR87_RS11780 0.61 +0.6 2,496,530 + ABZR87_RS11780 0.63 -0.3 2,496,531 - ABZR87_RS11780 0.63 +0.5 2,496,564 - ABZR87_RS11780 0.66 -0.9 2,496,564 - ABZR87_RS11780 0.66 -0.3 2,496,564 - ABZR87_RS11780 0.66 +0.5 2,496,564 - ABZR87_RS11780 0.66 +0.5 2,496,611 + ABZR87_RS11780 0.70 +0.4 2,496,623 + ABZR87_RS11780 0.72 -0.4 2,496,623 + ABZR87_RS11780 0.72 -0.5 2,496,623 + ABZR87_RS11780 0.72 +0.8 2,496,623 + ABZR87_RS11780 0.72 -0.9 2,496,624 - ABZR87_RS11780 0.72 +0.5 2,496,624 - ABZR87_RS11780 0.72 -0.4 2,496,624 - ABZR87_RS11780 0.72 +0.3 2,496,641 + ABZR87_RS11780 0.73 +0.9 2,496,642 - ABZR87_RS11780 0.73 +0.8 2,496,642 - ABZR87_RS11780 0.73 -1.2 2,497,037 + -0.8 2,497,037 + -0.5 2,497,037 + -0.7 2,497,134 + -0.1 2,497,134 + -1.2
Or see this region's nucleotide sequence