Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11625 and ABZR87_RS11630 are separated by 242 nucleotides ABZR87_RS11630 and ABZR87_RS11635 are separated by 90 nucleotides ABZR87_RS11635 and ABZR87_RS11640 are separated by 43 nucleotides ABZR87_RS11640 and ABZR87_RS11645 are separated by 173 nucleotides
ABZR87_RS11625: ABZR87_RS11625 - malate synthase A, at 2,463,576 to 2,465,156
_RS11625
ABZR87_RS11630: ABZR87_RS11630 - SRPBCC family protein, at 2,465,399 to 2,465,869
_RS11630
ABZR87_RS11635: ABZR87_RS11635 - DHA2 family efflux MFS transporter permease subunit, at 2,465,960 to 2,467,417
_RS11635
ABZR87_RS11640: ABZR87_RS11640 - acyl-CoA-binding protein, at 2,467,461 to 2,467,730
_RS11640
ABZR87_RS11645: ABZR87_RS11645 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,467,904 to 2,468,641
_RS11645
Position (kb)
2465
2466
2467
2468 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2465.142 kb on + strand at 2465.143 kb on - strand at 2465.175 kb on + strand at 2465.222 kb on - strand at 2465.279 kb on + strand at 2465.290 kb on + strand at 2465.370 kb on + strand at 2465.370 kb on + strand at 2465.639 kb on + strand, within ABZR87_RS11630 at 2465.639 kb on + strand, within ABZR87_RS11630 at 2465.640 kb on - strand, within ABZR87_RS11630 at 2465.640 kb on - strand, within ABZR87_RS11630 at 2465.640 kb on - strand, within ABZR87_RS11630 at 2465.732 kb on + strand, within ABZR87_RS11630 at 2466.003 kb on - strand at 2466.287 kb on + strand, within ABZR87_RS11635 at 2466.287 kb on + strand, within ABZR87_RS11635 at 2466.288 kb on - strand, within ABZR87_RS11635 at 2466.288 kb on - strand, within ABZR87_RS11635 at 2466.773 kb on + strand, within ABZR87_RS11635 at 2466.813 kb on - strand, within ABZR87_RS11635 at 2466.827 kb on + strand, within ABZR87_RS11635 at 2466.839 kb on + strand, within ABZR87_RS11635 at 2466.840 kb on - strand, within ABZR87_RS11635 at 2466.854 kb on + strand, within ABZR87_RS11635 at 2466.854 kb on + strand, within ABZR87_RS11635 at 2466.854 kb on + strand, within ABZR87_RS11635 at 2466.854 kb on + strand, within ABZR87_RS11635 at 2466.854 kb on + strand, within ABZR87_RS11635 at 2466.854 kb on + strand, within ABZR87_RS11635 at 2466.854 kb on + strand, within ABZR87_RS11635 at 2466.855 kb on - strand, within ABZR87_RS11635 at 2466.855 kb on - strand, within ABZR87_RS11635 at 2466.855 kb on - strand, within ABZR87_RS11635 at 2466.855 kb on - strand, within ABZR87_RS11635 at 2466.855 kb on - strand, within ABZR87_RS11635 at 2466.855 kb on - strand, within ABZR87_RS11635 at 2466.855 kb on - strand, within ABZR87_RS11635 at 2466.856 kb on + strand, within ABZR87_RS11635 at 2466.856 kb on + strand, within ABZR87_RS11635 at 2466.856 kb on + strand, within ABZR87_RS11635 at 2466.856 kb on + strand, within ABZR87_RS11635 at 2466.856 kb on + strand, within ABZR87_RS11635 at 2466.857 kb on - strand, within ABZR87_RS11635 at 2466.857 kb on - strand, within ABZR87_RS11635 at 2466.857 kb on - strand, within ABZR87_RS11635 at 2466.857 kb on - strand, within ABZR87_RS11635 at 2466.875 kb on + strand, within ABZR87_RS11635 at 2466.876 kb on - strand, within ABZR87_RS11635 at 2467.052 kb on + strand, within ABZR87_RS11635 at 2467.052 kb on + strand, within ABZR87_RS11635 at 2467.052 kb on + strand, within ABZR87_RS11635 at 2467.053 kb on - strand, within ABZR87_RS11635 at 2467.053 kb on - strand, within ABZR87_RS11635 at 2467.390 kb on - strand at 2467.504 kb on + strand, within ABZR87_RS11640 at 2467.504 kb on + strand, within ABZR87_RS11640 at 2467.504 kb on + strand, within ABZR87_RS11640 at 2467.504 kb on + strand, within ABZR87_RS11640 at 2467.505 kb on - strand, within ABZR87_RS11640 at 2467.505 kb on - strand, within ABZR87_RS11640 at 2467.564 kb on + strand, within ABZR87_RS11640 at 2467.584 kb on - strand, within ABZR87_RS11640 at 2467.630 kb on + strand, within ABZR87_RS11640 at 2467.630 kb on + strand, within ABZR87_RS11640 at 2467.631 kb on - strand, within ABZR87_RS11640 at 2467.631 kb on - strand, within ABZR87_RS11640 at 2467.631 kb on - strand, within ABZR87_RS11640 at 2467.639 kb on + strand, within ABZR87_RS11640 at 2467.639 kb on + strand, within ABZR87_RS11640 at 2467.640 kb on - strand, within ABZR87_RS11640 at 2467.640 kb on - strand, within ABZR87_RS11640 at 2467.768 kb on - strand at 2467.768 kb on - strand at 2467.892 kb on + strand at 2467.892 kb on + strand at 2467.892 kb on + strand at 2467.892 kb on + strand at 2467.893 kb on - strand at 2467.893 kb on - strand at 2467.893 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 2,465,142 + -3.4 2,465,143 - -1.4 2,465,175 + -0.2 2,465,222 - +0.6 2,465,279 + +0.0 2,465,290 + -0.9 2,465,370 + -0.9 2,465,370 + +0.9 2,465,639 + ABZR87_RS11630 0.51 -1.4 2,465,639 + ABZR87_RS11630 0.51 +0.6 2,465,640 - ABZR87_RS11630 0.51 +0.6 2,465,640 - ABZR87_RS11630 0.51 -0.1 2,465,640 - ABZR87_RS11630 0.51 -0.0 2,465,732 + ABZR87_RS11630 0.71 -1.9 2,466,003 - -0.0 2,466,287 + ABZR87_RS11635 0.22 +0.8 2,466,287 + ABZR87_RS11635 0.22 -0.6 2,466,288 - ABZR87_RS11635 0.22 +0.3 2,466,288 - ABZR87_RS11635 0.22 +0.2 2,466,773 + ABZR87_RS11635 0.56 +1.5 2,466,813 - ABZR87_RS11635 0.59 -0.3 2,466,827 + ABZR87_RS11635 0.59 -0.7 2,466,839 + ABZR87_RS11635 0.60 -0.3 2,466,840 - ABZR87_RS11635 0.60 +0.5 2,466,854 + ABZR87_RS11635 0.61 +0.3 2,466,854 + ABZR87_RS11635 0.61 -0.4 2,466,854 + ABZR87_RS11635 0.61 +0.7 2,466,854 + ABZR87_RS11635 0.61 +0.9 2,466,854 + ABZR87_RS11635 0.61 +1.1 2,466,854 + ABZR87_RS11635 0.61 -0.0 2,466,854 + ABZR87_RS11635 0.61 -1.4 2,466,855 - ABZR87_RS11635 0.61 +0.1 2,466,855 - ABZR87_RS11635 0.61 +0.4 2,466,855 - ABZR87_RS11635 0.61 +1.3 2,466,855 - ABZR87_RS11635 0.61 -0.6 2,466,855 - ABZR87_RS11635 0.61 +0.3 2,466,855 - ABZR87_RS11635 0.61 +0.2 2,466,855 - ABZR87_RS11635 0.61 +0.2 2,466,856 + ABZR87_RS11635 0.61 +0.9 2,466,856 + ABZR87_RS11635 0.61 +1.1 2,466,856 + ABZR87_RS11635 0.61 -1.7 2,466,856 + ABZR87_RS11635 0.61 +0.5 2,466,856 + ABZR87_RS11635 0.61 -0.1 2,466,857 - ABZR87_RS11635 0.62 -2.2 2,466,857 - ABZR87_RS11635 0.62 +0.3 2,466,857 - ABZR87_RS11635 0.62 +0.4 2,466,857 - ABZR87_RS11635 0.62 +0.0 2,466,875 + ABZR87_RS11635 0.63 +0.1 2,466,876 - ABZR87_RS11635 0.63 -0.4 2,467,052 + ABZR87_RS11635 0.75 +0.1 2,467,052 + ABZR87_RS11635 0.75 +0.9 2,467,052 + ABZR87_RS11635 0.75 -0.9 2,467,053 - ABZR87_RS11635 0.75 +1.0 2,467,053 - ABZR87_RS11635 0.75 +0.1 2,467,390 - +0.0 2,467,504 + ABZR87_RS11640 0.16 -0.3 2,467,504 + ABZR87_RS11640 0.16 -0.4 2,467,504 + ABZR87_RS11640 0.16 +0.4 2,467,504 + ABZR87_RS11640 0.16 -1.2 2,467,505 - ABZR87_RS11640 0.16 +0.7 2,467,505 - ABZR87_RS11640 0.16 +0.4 2,467,564 + ABZR87_RS11640 0.38 +0.0 2,467,584 - ABZR87_RS11640 0.46 -0.3 2,467,630 + ABZR87_RS11640 0.63 +0.4 2,467,630 + ABZR87_RS11640 0.63 +0.5 2,467,631 - ABZR87_RS11640 0.63 +0.5 2,467,631 - ABZR87_RS11640 0.63 -0.9 2,467,631 - ABZR87_RS11640 0.63 +0.6 2,467,639 + ABZR87_RS11640 0.66 +1.4 2,467,639 + ABZR87_RS11640 0.66 -0.7 2,467,640 - ABZR87_RS11640 0.66 +0.3 2,467,640 - ABZR87_RS11640 0.66 -0.5 2,467,768 - -0.8 2,467,768 - -0.1 2,467,892 + -0.1 2,467,892 + +1.9 2,467,892 + +1.1 2,467,892 + +0.8 2,467,893 - -0.3 2,467,893 - +0.3 2,467,893 - -1.0
Or see this region's nucleotide sequence