Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09795 and ABZR87_RS09800 are separated by 12 nucleotides ABZR87_RS09800 and ABZR87_RS09805 overlap by 4 nucleotides
ABZR87_RS09795: ABZR87_RS09795 - efflux RND transporter permease subunit, at 2,080,012 to 2,083,167
_RS09795
ABZR87_RS09800: ABZR87_RS09800 - alpha/beta fold hydrolase, at 2,083,180 to 2,084,004
_RS09800
ABZR87_RS09805: ABZR87_RS09805 - MASE1 domain-containing protein, at 2,084,001 to 2,085,287
_RS09805
Position (kb)
2083
2084
2085 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2082.274 kb on + strand, within ABZR87_RS09795 at 2082.457 kb on + strand, within ABZR87_RS09795 at 2082.571 kb on + strand, within ABZR87_RS09795 at 2082.778 kb on + strand, within ABZR87_RS09795 at 2082.778 kb on + strand, within ABZR87_RS09795 at 2082.779 kb on - strand, within ABZR87_RS09795 at 2082.779 kb on - strand, within ABZR87_RS09795 at 2083.203 kb on + strand at 2083.204 kb on - strand at 2083.605 kb on - strand, within ABZR87_RS09800 at 2083.613 kb on + strand, within ABZR87_RS09800 at 2083.613 kb on + strand, within ABZR87_RS09800 at 2083.765 kb on - strand, within ABZR87_RS09800 at 2083.799 kb on + strand, within ABZR87_RS09800 at 2083.799 kb on + strand, within ABZR87_RS09800 at 2083.799 kb on + strand, within ABZR87_RS09800 at 2083.800 kb on - strand, within ABZR87_RS09800 at 2083.800 kb on - strand, within ABZR87_RS09800 at 2083.941 kb on - strand at 2084.226 kb on + strand, within ABZR87_RS09805 at 2084.226 kb on + strand, within ABZR87_RS09805 at 2084.323 kb on + strand, within ABZR87_RS09805 at 2084.324 kb on - strand, within ABZR87_RS09805 at 2084.324 kb on - strand, within ABZR87_RS09805 at 2084.455 kb on + strand, within ABZR87_RS09805 at 2084.456 kb on - strand, within ABZR87_RS09805 at 2084.456 kb on - strand, within ABZR87_RS09805 at 2084.456 kb on - strand, within ABZR87_RS09805 at 2084.485 kb on + strand, within ABZR87_RS09805 at 2084.485 kb on + strand, within ABZR87_RS09805 at 2084.485 kb on + strand, within ABZR87_RS09805 at 2084.486 kb on - strand, within ABZR87_RS09805 at 2084.626 kb on + strand, within ABZR87_RS09805 at 2084.627 kb on - strand, within ABZR87_RS09805 at 2084.627 kb on - strand, within ABZR87_RS09805 at 2084.689 kb on + strand, within ABZR87_RS09805 at 2084.689 kb on + strand, within ABZR87_RS09805 at 2084.689 kb on + strand, within ABZR87_RS09805 at 2084.690 kb on - strand, within ABZR87_RS09805 at 2084.690 kb on - strand, within ABZR87_RS09805 at 2084.690 kb on - strand, within ABZR87_RS09805 at 2084.690 kb on - strand, within ABZR87_RS09805 at 2084.953 kb on + strand, within ABZR87_RS09805 at 2084.953 kb on + strand, within ABZR87_RS09805 at 2084.953 kb on + strand, within ABZR87_RS09805 at 2084.954 kb on - strand, within ABZR87_RS09805 at 2084.954 kb on - strand, within ABZR87_RS09805 at 2084.954 kb on - strand, within ABZR87_RS09805 at 2084.954 kb on - strand, within ABZR87_RS09805
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 2,082,274 + ABZR87_RS09795 0.72 -0.0 2,082,457 + ABZR87_RS09795 0.77 -0.3 2,082,571 + ABZR87_RS09795 0.81 +1.7 2,082,778 + ABZR87_RS09795 0.88 +0.1 2,082,778 + ABZR87_RS09795 0.88 +0.6 2,082,779 - ABZR87_RS09795 0.88 +0.8 2,082,779 - ABZR87_RS09795 0.88 -0.1 2,083,203 + +1.4 2,083,204 - -1.0 2,083,605 - ABZR87_RS09800 0.52 -0.6 2,083,613 + ABZR87_RS09800 0.52 -1.9 2,083,613 + ABZR87_RS09800 0.52 -1.0 2,083,765 - ABZR87_RS09800 0.71 +1.3 2,083,799 + ABZR87_RS09800 0.75 +0.8 2,083,799 + ABZR87_RS09800 0.75 +0.1 2,083,799 + ABZR87_RS09800 0.75 +1.0 2,083,800 - ABZR87_RS09800 0.75 +1.1 2,083,800 - ABZR87_RS09800 0.75 +1.4 2,083,941 - +0.7 2,084,226 + ABZR87_RS09805 0.17 -1.3 2,084,226 + ABZR87_RS09805 0.17 -0.8 2,084,323 + ABZR87_RS09805 0.25 -0.4 2,084,324 - ABZR87_RS09805 0.25 -1.3 2,084,324 - ABZR87_RS09805 0.25 -1.6 2,084,455 + ABZR87_RS09805 0.35 +0.9 2,084,456 - ABZR87_RS09805 0.35 -3.0 2,084,456 - ABZR87_RS09805 0.35 +0.3 2,084,456 - ABZR87_RS09805 0.35 -1.5 2,084,485 + ABZR87_RS09805 0.38 +0.5 2,084,485 + ABZR87_RS09805 0.38 +0.1 2,084,485 + ABZR87_RS09805 0.38 +0.7 2,084,486 - ABZR87_RS09805 0.38 -3.5 2,084,626 + ABZR87_RS09805 0.49 +0.5 2,084,627 - ABZR87_RS09805 0.49 -2.2 2,084,627 - ABZR87_RS09805 0.49 +0.2 2,084,689 + ABZR87_RS09805 0.53 -0.0 2,084,689 + ABZR87_RS09805 0.53 -0.5 2,084,689 + ABZR87_RS09805 0.53 -1.3 2,084,690 - ABZR87_RS09805 0.54 -0.7 2,084,690 - ABZR87_RS09805 0.54 -3.0 2,084,690 - ABZR87_RS09805 0.54 +0.3 2,084,690 - ABZR87_RS09805 0.54 -2.2 2,084,953 + ABZR87_RS09805 0.74 -1.1 2,084,953 + ABZR87_RS09805 0.74 -1.1 2,084,953 + ABZR87_RS09805 0.74 +0.1 2,084,954 - ABZR87_RS09805 0.74 -3.2 2,084,954 - ABZR87_RS09805 0.74 +0.9 2,084,954 - ABZR87_RS09805 0.74 -2.2 2,084,954 - ABZR87_RS09805 0.74 -0.8
Or see this region's nucleotide sequence