Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS07850 and ABZR87_RS07855 are separated by 5 nucleotides ABZR87_RS07855 and ABZR87_RS07860 are separated by 33 nucleotides
ABZR87_RS07850: ABZR87_RS07850 - DEAD/DEAH box helicase, at 1,668,667 to 1,670,346
_RS07850
ABZR87_RS07855: ABZR87_RS07855 - serine/threonine protein kinase, at 1,670,352 to 1,671,404
_RS07855
ABZR87_RS07860: ABZR87_RS07860 - pirin family protein, at 1,671,438 to 1,672,343
_RS07860
Position (kb)
1670
1671
1672 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1669.354 kb on + strand, within ABZR87_RS07850 at 1669.355 kb on - strand, within ABZR87_RS07850 at 1669.355 kb on - strand, within ABZR87_RS07850 at 1669.666 kb on + strand, within ABZR87_RS07850 at 1669.666 kb on + strand, within ABZR87_RS07850 at 1669.666 kb on + strand, within ABZR87_RS07850 at 1669.667 kb on - strand, within ABZR87_RS07850 at 1669.667 kb on - strand, within ABZR87_RS07850 at 1669.667 kb on - strand, within ABZR87_RS07850 at 1669.667 kb on - strand, within ABZR87_RS07850 at 1669.667 kb on - strand, within ABZR87_RS07850 at 1669.667 kb on - strand, within ABZR87_RS07850 at 1669.677 kb on + strand, within ABZR87_RS07850 at 1669.791 kb on + strand, within ABZR87_RS07850 at 1669.876 kb on - strand, within ABZR87_RS07850 at 1669.876 kb on - strand, within ABZR87_RS07850 at 1670.337 kb on + strand at 1670.337 kb on + strand at 1670.338 kb on - strand at 1670.493 kb on + strand, within ABZR87_RS07855 at 1670.493 kb on + strand, within ABZR87_RS07855 at 1670.538 kb on + strand, within ABZR87_RS07855 at 1670.538 kb on + strand, within ABZR87_RS07855 at 1670.588 kb on + strand, within ABZR87_RS07855 at 1670.589 kb on - strand, within ABZR87_RS07855 at 1670.589 kb on - strand, within ABZR87_RS07855 at 1670.934 kb on + strand, within ABZR87_RS07855 at 1670.934 kb on + strand, within ABZR87_RS07855 at 1670.935 kb on - strand, within ABZR87_RS07855 at 1670.935 kb on - strand, within ABZR87_RS07855 at 1671.020 kb on + strand, within ABZR87_RS07855 at 1671.186 kb on + strand, within ABZR87_RS07855 at 1671.222 kb on + strand, within ABZR87_RS07855 at 1671.223 kb on - strand, within ABZR87_RS07855 at 1671.223 kb on - strand, within ABZR87_RS07855 at 1671.261 kb on + strand, within ABZR87_RS07855 at 1671.261 kb on + strand, within ABZR87_RS07855 at 1671.262 kb on - strand, within ABZR87_RS07855 at 1671.440 kb on - strand at 1671.514 kb on + strand at 1671.514 kb on + strand at 1671.515 kb on - strand at 1671.515 kb on - strand at 1671.709 kb on + strand, within ABZR87_RS07860 at 1671.709 kb on + strand, within ABZR87_RS07860 at 1671.709 kb on + strand, within ABZR87_RS07860 at 1671.709 kb on + strand, within ABZR87_RS07860 at 1671.710 kb on - strand, within ABZR87_RS07860 at 1671.710 kb on - strand, within ABZR87_RS07860 at 1671.710 kb on - strand, within ABZR87_RS07860 at 1671.710 kb on - strand, within ABZR87_RS07860 at 1671.710 kb on - strand, within ABZR87_RS07860 at 1671.738 kb on + strand, within ABZR87_RS07860 at 1671.739 kb on - strand, within ABZR87_RS07860 at 1671.781 kb on + strand, within ABZR87_RS07860 at 1671.782 kb on - strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.102 kb on + strand, within ABZR87_RS07860 at 1672.103 kb on - strand, within ABZR87_RS07860 at 1672.103 kb on - strand, within ABZR87_RS07860 at 1672.103 kb on - strand, within ABZR87_RS07860 at 1672.103 kb on - strand, within ABZR87_RS07860 at 1672.103 kb on - strand, within ABZR87_RS07860 at 1672.103 kb on - strand, within ABZR87_RS07860 at 1672.103 kb on - strand, within ABZR87_RS07860 at 1672.154 kb on - strand, within ABZR87_RS07860 at 1672.154 kb on - strand, within ABZR87_RS07860 at 1672.154 kb on - strand, within ABZR87_RS07860 at 1672.154 kb on - strand, within ABZR87_RS07860 at 1672.154 kb on - strand, within ABZR87_RS07860 at 1672.154 kb on - strand, within ABZR87_RS07860 at 1672.154 kb on - strand, within ABZR87_RS07860 at 1672.373 kb on + strand at 1672.374 kb on - strand at 1672.384 kb on + strand at 1672.385 kb on - strand at 1672.385 kb on - strand at 1672.390 kb on - strand at 1672.390 kb on - strand at 1672.390 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 1,669,354 + ABZR87_RS07850 0.41 -2.1 1,669,355 - ABZR87_RS07850 0.41 +0.8 1,669,355 - ABZR87_RS07850 0.41 +0.7 1,669,666 + ABZR87_RS07850 0.59 +1.7 1,669,666 + ABZR87_RS07850 0.59 -0.4 1,669,666 + ABZR87_RS07850 0.59 +0.7 1,669,667 - ABZR87_RS07850 0.60 +2.2 1,669,667 - ABZR87_RS07850 0.60 -1.1 1,669,667 - ABZR87_RS07850 0.60 +0.6 1,669,667 - ABZR87_RS07850 0.60 +1.1 1,669,667 - ABZR87_RS07850 0.60 +0.5 1,669,667 - ABZR87_RS07850 0.60 -0.4 1,669,677 + ABZR87_RS07850 0.60 +2.5 1,669,791 + ABZR87_RS07850 0.67 +0.7 1,669,876 - ABZR87_RS07850 0.72 +0.7 1,669,876 - ABZR87_RS07850 0.72 +2.5 1,670,337 + +0.7 1,670,337 + +0.9 1,670,338 - +0.4 1,670,493 + ABZR87_RS07855 0.13 +0.9 1,670,493 + ABZR87_RS07855 0.13 -0.4 1,670,538 + ABZR87_RS07855 0.18 -0.7 1,670,538 + ABZR87_RS07855 0.18 +1.1 1,670,588 + ABZR87_RS07855 0.22 -0.7 1,670,589 - ABZR87_RS07855 0.23 -0.1 1,670,589 - ABZR87_RS07855 0.23 +0.2 1,670,934 + ABZR87_RS07855 0.55 -0.5 1,670,934 + ABZR87_RS07855 0.55 +0.7 1,670,935 - ABZR87_RS07855 0.55 -0.7 1,670,935 - ABZR87_RS07855 0.55 +1.7 1,671,020 + ABZR87_RS07855 0.63 +0.9 1,671,186 + ABZR87_RS07855 0.79 +0.9 1,671,222 + ABZR87_RS07855 0.83 +0.7 1,671,223 - ABZR87_RS07855 0.83 +1.2 1,671,223 - ABZR87_RS07855 0.83 +1.4 1,671,261 + ABZR87_RS07855 0.86 +0.4 1,671,261 + ABZR87_RS07855 0.86 +0.9 1,671,262 - ABZR87_RS07855 0.86 -0.2 1,671,440 - +0.6 1,671,514 + +2.0 1,671,514 + +0.2 1,671,515 - +0.5 1,671,515 - -1.5 1,671,709 + ABZR87_RS07860 0.30 -0.4 1,671,709 + ABZR87_RS07860 0.30 +0.8 1,671,709 + ABZR87_RS07860 0.30 +0.1 1,671,709 + ABZR87_RS07860 0.30 -0.4 1,671,710 - ABZR87_RS07860 0.30 +1.9 1,671,710 - ABZR87_RS07860 0.30 +0.0 1,671,710 - ABZR87_RS07860 0.30 +1.1 1,671,710 - ABZR87_RS07860 0.30 +0.3 1,671,710 - ABZR87_RS07860 0.30 -0.1 1,671,738 + ABZR87_RS07860 0.33 -0.5 1,671,739 - ABZR87_RS07860 0.33 +0.5 1,671,781 + ABZR87_RS07860 0.38 -2.9 1,671,782 - ABZR87_RS07860 0.38 -0.7 1,672,102 + ABZR87_RS07860 0.73 -0.4 1,672,102 + ABZR87_RS07860 0.73 +0.5 1,672,102 + ABZR87_RS07860 0.73 +0.2 1,672,102 + ABZR87_RS07860 0.73 +0.3 1,672,102 + ABZR87_RS07860 0.73 -1.1 1,672,102 + ABZR87_RS07860 0.73 -1.0 1,672,102 + ABZR87_RS07860 0.73 -1.8 1,672,102 + ABZR87_RS07860 0.73 +2.5 1,672,102 + ABZR87_RS07860 0.73 +0.1 1,672,102 + ABZR87_RS07860 0.73 -0.5 1,672,102 + ABZR87_RS07860 0.73 +0.1 1,672,103 - ABZR87_RS07860 0.73 -1.8 1,672,103 - ABZR87_RS07860 0.73 +0.6 1,672,103 - ABZR87_RS07860 0.73 +0.4 1,672,103 - ABZR87_RS07860 0.73 -0.2 1,672,103 - ABZR87_RS07860 0.73 +2.5 1,672,103 - ABZR87_RS07860 0.73 +1.7 1,672,103 - ABZR87_RS07860 0.73 -0.4 1,672,154 - ABZR87_RS07860 0.79 -0.2 1,672,154 - ABZR87_RS07860 0.79 +0.7 1,672,154 - ABZR87_RS07860 0.79 +1.6 1,672,154 - ABZR87_RS07860 0.79 +0.6 1,672,154 - ABZR87_RS07860 0.79 +0.2 1,672,154 - ABZR87_RS07860 0.79 +0.5 1,672,154 - ABZR87_RS07860 0.79 -0.6 1,672,373 + -1.9 1,672,374 - -0.8 1,672,384 + -0.8 1,672,385 - -1.9 1,672,385 - -1.4 1,672,390 - -0.3 1,672,390 - -0.8 1,672,390 - -1.2
Or see this region's nucleotide sequence