Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS07605 and ABZR87_RS07610 are separated by 19 nucleotides ABZR87_RS07610 and ABZR87_RS07615 are separated by 5 nucleotides ABZR87_RS07615 and ABZR87_RS07620 are separated by 12 nucleotides
ABZR87_RS07605: ABZR87_RS07605 - D-aminoacyl-tRNA deacylase, at 1,612,534 to 1,613,046
_RS07605
ABZR87_RS07610: ABZR87_RS07610 - histidine phosphatase family protein, at 1,613,066 to 1,613,746
_RS07610
ABZR87_RS07615: ABZR87_RS07615 - queuosine precursor transporter, at 1,613,752 to 1,614,462
_RS07615
ABZR87_RS07620: ABZR87_RS07620 - Holliday junction branch migration DNA helicase RuvB, at 1,614,475 to 1,615,551
_RS07620
Position (kb)
1613
1614
1615 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1612.865 kb on - strand, within ABZR87_RS07605 at 1612.865 kb on - strand, within ABZR87_RS07605 at 1613.258 kb on + strand, within ABZR87_RS07610 at 1613.258 kb on + strand, within ABZR87_RS07610 at 1613.259 kb on - strand, within ABZR87_RS07610 at 1613.259 kb on - strand, within ABZR87_RS07610 at 1613.357 kb on + strand, within ABZR87_RS07610 at 1613.357 kb on + strand, within ABZR87_RS07610 at 1613.358 kb on - strand, within ABZR87_RS07610 at 1613.381 kb on + strand, within ABZR87_RS07610 at 1613.381 kb on + strand, within ABZR87_RS07610 at 1613.381 kb on + strand, within ABZR87_RS07610 at 1613.382 kb on - strand, within ABZR87_RS07610 at 1613.382 kb on - strand, within ABZR87_RS07610 at 1613.753 kb on + strand at 1613.754 kb on - strand at 1613.754 kb on - strand at 1613.795 kb on + strand at 1613.795 kb on + strand at 1613.796 kb on - strand at 1613.796 kb on - strand at 1613.799 kb on - strand at 1613.885 kb on + strand, within ABZR87_RS07615 at 1613.885 kb on + strand, within ABZR87_RS07615 at 1613.885 kb on + strand, within ABZR87_RS07615 at 1613.885 kb on + strand, within ABZR87_RS07615 at 1613.886 kb on - strand, within ABZR87_RS07615 at 1613.886 kb on - strand, within ABZR87_RS07615 at 1613.933 kb on + strand, within ABZR87_RS07615 at 1613.934 kb on - strand, within ABZR87_RS07615 at 1613.934 kb on - strand, within ABZR87_RS07615 at 1613.948 kb on + strand, within ABZR87_RS07615 at 1613.949 kb on - strand, within ABZR87_RS07615 at 1614.050 kb on + strand, within ABZR87_RS07615 at 1614.050 kb on + strand, within ABZR87_RS07615 at 1614.050 kb on + strand, within ABZR87_RS07615 at 1614.050 kb on + strand, within ABZR87_RS07615 at 1614.050 kb on + strand, within ABZR87_RS07615 at 1614.051 kb on - strand, within ABZR87_RS07615 at 1614.051 kb on - strand, within ABZR87_RS07615 at 1614.051 kb on - strand, within ABZR87_RS07615 at 1614.051 kb on - strand, within ABZR87_RS07615 at 1614.176 kb on - strand, within ABZR87_RS07615 at 1614.176 kb on - strand, within ABZR87_RS07615 at 1614.176 kb on - strand, within ABZR87_RS07615 at 1614.251 kb on + strand, within ABZR87_RS07615 at 1614.252 kb on - strand, within ABZR87_RS07615 at 1614.255 kb on + strand, within ABZR87_RS07615 at 1614.257 kb on + strand, within ABZR87_RS07615 at 1614.257 kb on + strand, within ABZR87_RS07615 at 1614.257 kb on + strand, within ABZR87_RS07615 at 1614.257 kb on + strand, within ABZR87_RS07615 at 1614.257 kb on + strand, within ABZR87_RS07615 at 1614.258 kb on - strand, within ABZR87_RS07615 at 1614.258 kb on - strand, within ABZR87_RS07615 at 1614.258 kb on - strand, within ABZR87_RS07615 at 1614.287 kb on + strand, within ABZR87_RS07615 at 1614.287 kb on + strand, within ABZR87_RS07615 at 1614.288 kb on - strand, within ABZR87_RS07615 at 1614.288 kb on - strand, within ABZR87_RS07615 at 1614.288 kb on - strand, within ABZR87_RS07615 at 1614.426 kb on - strand at 1614.428 kb on + strand at 1614.591 kb on - strand, within ABZR87_RS07620 at 1614.608 kb on + strand, within ABZR87_RS07620 at 1614.609 kb on - strand, within ABZR87_RS07620 at 1614.609 kb on - strand, within ABZR87_RS07620 at 1614.966 kb on + strand, within ABZR87_RS07620 at 1614.968 kb on + strand, within ABZR87_RS07620 at 1614.968 kb on + strand, within ABZR87_RS07620 at 1614.969 kb on - strand, within ABZR87_RS07620 at 1614.969 kb on - strand, within ABZR87_RS07620 at 1614.969 kb on - strand, within ABZR87_RS07620 at 1615.122 kb on - strand, within ABZR87_RS07620 at 1615.427 kb on + strand, within ABZR87_RS07620 at 1615.427 kb on + strand, within ABZR87_RS07620 at 1615.428 kb on - strand, within ABZR87_RS07620 at 1615.428 kb on - strand, within ABZR87_RS07620
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 1,612,865 - ABZR87_RS07605 0.65 -2.4 1,612,865 - ABZR87_RS07605 0.65 -0.6 1,613,258 + ABZR87_RS07610 0.28 +0.5 1,613,258 + ABZR87_RS07610 0.28 +0.0 1,613,259 - ABZR87_RS07610 0.28 -0.5 1,613,259 - ABZR87_RS07610 0.28 +0.5 1,613,357 + ABZR87_RS07610 0.43 -0.8 1,613,357 + ABZR87_RS07610 0.43 -0.2 1,613,358 - ABZR87_RS07610 0.43 +0.6 1,613,381 + ABZR87_RS07610 0.46 -0.1 1,613,381 + ABZR87_RS07610 0.46 -0.9 1,613,381 + ABZR87_RS07610 0.46 -0.0 1,613,382 - ABZR87_RS07610 0.46 -1.1 1,613,382 - ABZR87_RS07610 0.46 -0.5 1,613,753 + +1.3 1,613,754 - +0.5 1,613,754 - -1.6 1,613,795 + -0.2 1,613,795 + +0.9 1,613,796 - +0.7 1,613,796 - -1.0 1,613,799 - +1.7 1,613,885 + ABZR87_RS07615 0.19 +0.1 1,613,885 + ABZR87_RS07615 0.19 +0.7 1,613,885 + ABZR87_RS07615 0.19 -1.7 1,613,885 + ABZR87_RS07615 0.19 -0.2 1,613,886 - ABZR87_RS07615 0.19 -1.6 1,613,886 - ABZR87_RS07615 0.19 +1.1 1,613,933 + ABZR87_RS07615 0.25 +0.1 1,613,934 - ABZR87_RS07615 0.26 +0.9 1,613,934 - ABZR87_RS07615 0.26 -0.8 1,613,948 + ABZR87_RS07615 0.28 +0.0 1,613,949 - ABZR87_RS07615 0.28 +0.6 1,614,050 + ABZR87_RS07615 0.42 -0.0 1,614,050 + ABZR87_RS07615 0.42 +2.3 1,614,050 + ABZR87_RS07615 0.42 -0.6 1,614,050 + ABZR87_RS07615 0.42 -0.0 1,614,050 + ABZR87_RS07615 0.42 -0.2 1,614,051 - ABZR87_RS07615 0.42 -1.6 1,614,051 - ABZR87_RS07615 0.42 +0.6 1,614,051 - ABZR87_RS07615 0.42 +0.2 1,614,051 - ABZR87_RS07615 0.42 +0.2 1,614,176 - ABZR87_RS07615 0.60 +0.0 1,614,176 - ABZR87_RS07615 0.60 -0.7 1,614,176 - ABZR87_RS07615 0.60 +0.8 1,614,251 + ABZR87_RS07615 0.70 +0.5 1,614,252 - ABZR87_RS07615 0.70 +1.0 1,614,255 + ABZR87_RS07615 0.71 +0.5 1,614,257 + ABZR87_RS07615 0.71 -1.0 1,614,257 + ABZR87_RS07615 0.71 +1.1 1,614,257 + ABZR87_RS07615 0.71 +1.1 1,614,257 + ABZR87_RS07615 0.71 +0.2 1,614,257 + ABZR87_RS07615 0.71 +0.3 1,614,258 - ABZR87_RS07615 0.71 +0.7 1,614,258 - ABZR87_RS07615 0.71 +0.7 1,614,258 - ABZR87_RS07615 0.71 +0.5 1,614,287 + ABZR87_RS07615 0.75 +0.1 1,614,287 + ABZR87_RS07615 0.75 -0.9 1,614,288 - ABZR87_RS07615 0.75 -0.3 1,614,288 - ABZR87_RS07615 0.75 -0.0 1,614,288 - ABZR87_RS07615 0.75 +0.6 1,614,426 - +0.1 1,614,428 + -2.4 1,614,591 - ABZR87_RS07620 0.11 +0.5 1,614,608 + ABZR87_RS07620 0.12 -0.7 1,614,609 - ABZR87_RS07620 0.12 -1.1 1,614,609 - ABZR87_RS07620 0.12 -1.6 1,614,966 + ABZR87_RS07620 0.46 -0.5 1,614,968 + ABZR87_RS07620 0.46 -1.1 1,614,968 + ABZR87_RS07620 0.46 -3.4 1,614,969 - ABZR87_RS07620 0.46 -2.0 1,614,969 - ABZR87_RS07620 0.46 -0.8 1,614,969 - ABZR87_RS07620 0.46 -2.8 1,615,122 - ABZR87_RS07620 0.60 -1.5 1,615,427 + ABZR87_RS07620 0.88 -0.8 1,615,427 + ABZR87_RS07620 0.88 -0.1 1,615,428 - ABZR87_RS07620 0.88 -0.1 1,615,428 - ABZR87_RS07620 0.88 -1.8
Or see this region's nucleotide sequence